FFCP PHASE1:Hg19::chr10:134775979..134775984,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:134775979..134775984,+ | |||
|coexpression_cluster_id=C274 | |coexpression_cluster_id=C274 | ||
|description=CAGE_peak_at_chr10:134775979..134775984,+ | |description=CAGE_peak_at_chr10:134775979..134775984,+ | ||
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|ontology_enrichment_celltype=CL:0002057!2.74e-49!42;CL:0000860!3.46e-45!45;CL:0000557!1.19e-34!71;CL:0000839!2.18e-31!70;CL:0000766!2.20e-31!76;CL:0002009!8.16e-31!65;CL:0002194!3.07e-28!63;CL:0000576!3.07e-28!63;CL:0000040!3.07e-28!63;CL:0000559!3.07e-28!63;CL:0002031!9.64e-28!124;CL:0000738!2.69e-26!140;CL:0002087!1.15e-22!119;CL:0000763!1.31e-19!112;CL:0000049!1.31e-19!112;CL:0000988!4.16e-19!182;CL:0002032!6.59e-19!165;CL:0000837!6.59e-19!165;CL:0000037!2.19e-18!172;CL:0000566!2.19e-18!172 | |ontology_enrichment_celltype=CL:0002057!2.74e-49!42;CL:0000860!3.46e-45!45;CL:0000557!1.19e-34!71;CL:0000839!2.18e-31!70;CL:0000766!2.20e-31!76;CL:0002009!8.16e-31!65;CL:0002194!3.07e-28!63;CL:0000576!3.07e-28!63;CL:0000040!3.07e-28!63;CL:0000559!3.07e-28!63;CL:0002031!9.64e-28!124;CL:0000738!2.69e-26!140;CL:0002087!1.15e-22!119;CL:0000763!1.31e-19!112;CL:0000049!1.31e-19!112;CL:0000988!4.16e-19!182;CL:0002032!6.59e-19!165;CL:0000837!6.59e-19!165;CL:0000037!2.19e-18!172;CL:0000566!2.19e-18!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.69e-88;33!CL:0002057;4.69e-88;33!CL:0000473;2.06e-62;39!CL:0000234;2.06e-62;39!CL:0000576;5.66e-40;48!CL:0000766;3.36e-27;69!CL:0000763;8.60e-13;100!CL:0002087;6.87e-10;104!CL:0000097;3.67e-08;5!CL:0000738;1.10e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;4.69e-88;33!CL:0002057;4.69e-88;33!CL:0000473;2.06e-62;39!CL:0000234;2.06e-62;39!CL:0000576;5.66e-40;48!CL:0000766;3.36e-27;69!CL:0000763;8.60e-13;100!CL:0002087;6.87e-10;104!CL:0000097;3.67e-08;5!CL:0000738;1.10e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.83e-75,42;CL:0002057,3.83e-75,42;CL:0000473,6.80e-65,48;CL:0000234,6.80e-65,48;CL:0000557,2.67e-58,67;CL:0000839,2.29e-55,66;CL:0000766,1.33e-53,72;CL:0002009,1.68e-52,61;CL:0002194,1.52e-50,59;CL:0000576,1.52e-50,59;CL:0000040,1.52e-50,59;CL:0000559,1.52e-50,59;CL:0000763,7.92e-36,108;CL:0000049,7.92e-36,108;CL:0002031,1.58e-31,120;CL:0000738,8.25e-29,136;CL:0002087,1.05e-24,115;CL:0002032,3.77e-23,161;CL:0000837,3.77e-23,161;CL:0000037,7.25e-22,168;CL:0000988,7.47e-22,177;CL:0000097,3.72e-08,5;CL:0002028,3.72e-08,5;CL:0000134,4.99e-07,354;CL:0002320,9.55e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.07e-56;42!CL:0000049;9.65e-11;108 | |ontology_enrichment_development_v019=CL:0002057;5.07e-56;42!CL:0000049;9.65e-11;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.68e-29!80;UBERON:0002390!4.25e-28!102;UBERON:0003061!4.25e-28!102;UBERON:0001474!2.32e-26!86;UBERON:0002193!1.14e-25!112;UBERON:0002405!6.26e-25!115;UBERON:0004765!1.41e-20!101;UBERON:0001434!1.41e-20!101;UBERON:0003081!4.20e-08!216;UBERON:0002204!5.90e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!2.68e-29!80;UBERON:0002390!4.25e-28!102;UBERON:0003061!4.25e-28!102;UBERON:0001474!2.32e-26!86;UBERON:0002193!1.14e-25!112;UBERON:0002405!6.26e-25!115;UBERON:0004765!1.41e-20!101;UBERON:0001434!1.41e-20!101;UBERON:0003081!4.20e-08!216;UBERON:0002204!5.90e-08!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.33e-50,76;UBERON:0001474,2.14e-46,82;UBERON:0002405,9.29e-43,93;UBERON:0004765,1.19e-41,90;UBERON:0002390,2.70e-40,98;UBERON:0003061,2.70e-40,98;UBERON:0002193,2.94e-38,108;UBERON:0001434,8.87e-37,100;UBERON:0002204,4.19e-19,167;UBERON:0003081,7.84e-17,203;UBERON:0000926,6.59e-09,315;UBERON:0004120,6.59e-09,315;UBERON:0006603,6.59e-09,315 | |||
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| ||
|short_description=p@chr10:134775979..134775984,+ | |short_description=p@chr10:134775979..134775984,+ | ||
}} | }} |
Latest revision as of 11:48, 23 July 2015
Short description: | p@chr10:134775979..134775984, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134775979..134775984, + |
Coexpression cluster: | C274_CD14_Mast_immature_Basophils_mature_vagina_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.83e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.83e-75 | 42 |
defensive cell | 6.80e-65 | 48 |
phagocyte | 6.80e-65 | 48 |
granulocyte monocyte progenitor cell | 2.67e-58 | 67 |
myeloid lineage restricted progenitor cell | 2.29e-55 | 66 |
myeloid leukocyte | 1.33e-53 | 72 |
macrophage dendritic cell progenitor | 1.68e-52 | 61 |
monopoietic cell | 1.52e-50 | 59 |
monocyte | 1.52e-50 | 59 |
monoblast | 1.52e-50 | 59 |
promonocyte | 1.52e-50 | 59 |
myeloid cell | 7.92e-36 | 108 |
common myeloid progenitor | 7.92e-36 | 108 |
hematopoietic lineage restricted progenitor cell | 1.58e-31 | 120 |
leukocyte | 8.25e-29 | 136 |
nongranular leukocyte | 1.05e-24 | 115 |
hematopoietic oligopotent progenitor cell | 3.77e-23 | 161 |
hematopoietic multipotent progenitor cell | 3.77e-23 | 161 |
hematopoietic stem cell | 7.25e-22 | 168 |
hematopoietic cell | 7.47e-22 | 177 |
mast cell | 3.72e-08 | 5 |
basophil mast progenitor cell | 3.72e-08 | 5 |
mesenchymal cell | 4.99e-07 | 354 |
connective tissue cell | 9.55e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.33e-50 | 76 |
bone element | 2.14e-46 | 82 |
immune system | 9.29e-43 | 93 |
skeletal element | 1.19e-41 | 90 |
hematopoietic system | 2.70e-40 | 98 |
blood island | 2.70e-40 | 98 |
hemolymphoid system | 2.94e-38 | 108 |
skeletal system | 8.87e-37 | 100 |
musculoskeletal system | 4.19e-19 | 167 |
lateral plate mesoderm | 7.84e-17 | 203 |
mesoderm | 6.59e-09 | 315 |
mesoderm-derived structure | 6.59e-09 | 315 |
presumptive mesoderm | 6.59e-09 | 315 |