FFCP PHASE1:Hg19::chr7:116165038..116165071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=857 | |EntrezGene=857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1527 | |HGNC=1527 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCT5,F8WDM7,Q2TNI1,Q59E85 | |UniProt=E9PCT5,F8WDM7,Q2TNI1,Q59E85 | ||
|association_with_transcript=0bp_to_ENST00000393470,ENST00000451122,ENST00000489856,NM_001172895,uc003vig.1_5end | |association_with_transcript=0bp_to_ENST00000393470,ENST00000451122,ENST00000489856,NM_001172895,uc003vig.1_5end | ||
|cluster_id=chr7:116165038..116165071,+ | |||
|description=CAGE_peak_2_at_CAV1_5end | |description=CAGE_peak_2_at_CAV1_5end | ||
|id=chr7:116165038..116165071,+ | |id=chr7:116165038..116165071,+ | ||
|ontology_enrichment_celltype=CL:0000220!3.02e-21!246;CL:0002321!1.12e-20!248;CL:0000055!2.23e-18!180;CL:0000222!3.08e-16!119;CL:0000057!3.43e-14!75;CL:0000076!4.16e-13!62;CL:0002139!4.51e-13!24;CL:0000066!1.55e-10!254;CL:0000115!1.73e-09!35;CL:0002620!2.12e-09!23;CL:0000071!3.57e-09!18;CL:0002546!3.57e-09!18;CL:0000213!6.45e-09!57;CL:0000215!6.45e-09!57;CL:0000680!1.83e-08!57;CL:0000056!1.83e-08!57;CL:0000355!1.83e-08!57;CL:0002078!1.05e-07!44;CL:0000187!2.29e-07!54;CL:0000183!3.28e-07!59 | |ontology_enrichment_celltype=CL:0000220!3.02e-21!246;CL:0002321!1.12e-20!248;CL:0000055!2.23e-18!180;CL:0000222!3.08e-16!119;CL:0000057!3.43e-14!75;CL:0000076!4.16e-13!62;CL:0002139!4.51e-13!24;CL:0000066!1.55e-10!254;CL:0000115!1.73e-09!35;CL:0002620!2.12e-09!23;CL:0000071!3.57e-09!18;CL:0002546!3.57e-09!18;CL:0000213!6.45e-09!57;CL:0000215!6.45e-09!57;CL:0000680!1.83e-08!57;CL:0000056!1.83e-08!57;CL:0000355!1.83e-08!57;CL:0002078!1.05e-07!44;CL:0000187!2.29e-07!54;CL:0000183!3.28e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.61e-13;24!CL:0002620;1.82e-09;23!CL:0000071;3.09e-09;18!CL:0000115;1.59e-08;36!CL:0000076;7.45e-07;63 | |ontology_enrichment_celltype_v019=CL:0002139;3.61e-13;24!CL:0002620;1.82e-09;23!CL:0000071;3.09e-09;18!CL:0000115;1.59e-08;36!CL:0000076;7.45e-07;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.38e-21,250;CL:0000222,3.53e-17,121;CL:0000057,3.10e-14,76;CL:0000076,7.39e-14,63;CL:0002139,3.59e-13,24;CL:0000066,4.50e-10,253;CL:0000115,5.27e-10,36;CL:0002620,1.81e-09,23;CL:0000213,2.14e-09,58;CL:0000215,2.14e-09,58;CL:0000071,3.07e-09,18;CL:0002546,3.07e-09,18;CL:0000680,7.14e-09,58;CL:0000056,7.14e-09,58;CL:0000355,7.14e-09,58;CL:0002078,3.52e-08,45;CL:0000187,9.42e-08,55 | |||
|ontology_enrichment_development_v019=CL:0002546;3.09e-09;18 | |ontology_enrichment_development_v019=CL:0002546;3.09e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.36e-20!95;UBERON:0000475!2.07e-16!365;UBERON:0000914!1.51e-15!83;UBERON:0002329!1.51e-15!83;UBERON:0003077!1.51e-15!83;UBERON:0003059!1.51e-15!83;UBERON:0007282!1.51e-15!83;UBERON:0009618!1.51e-15!83;UBERON:0007285!1.51e-15!83;UBERON:0000468!5.59e-15!659;UBERON:0002049!8.63e-15!79;UBERON:0007798!8.63e-15!79;UBERON:0000486!1.02e-14!82;UBERON:0000055!1.15e-12!69;UBERON:0002199!1.39e-12!45;UBERON:0002416!1.39e-12!45;UBERON:0004290!4.90e-12!70;UBERON:0002100!5.99e-12!216;UBERON:0005256!1.05e-11!143;UBERON:0000119!1.11e-11!312;UBERON:0000490!2.63e-11!138;UBERON:0000467!3.83e-11!625;UBERON:0000483!4.24e-11!309;UBERON:0000480!4.70e-11!626;UBERON:0002097!6.96e-11!40;UBERON:0004872!7.16e-11!84;UBERON:0000481!7.18e-11!347;UBERON:0001981!1.17e-09!60;UBERON:0007500!1.17e-09!60;UBERON:0004537!1.17e-09!60;UBERON:0006965!1.17e-09!60;UBERON:0003104!2.54e-09!238;UBERON:0009142!2.54e-09!238;UBERON:0001986!3.57e-09!18;UBERON:0004638!3.57e-09!18;UBERON:0004852!3.57e-09!18;UBERON:0000477!1.53e-08!286;UBERON:0000487!1.53e-08!22;UBERON:0002385!1.99e-08!63;UBERON:0001015!1.99e-08!63;UBERON:0000383!1.99e-08!63;UBERON:0001134!2.80e-08!61;UBERON:0002036!2.80e-08!61;UBERON:0003082!2.80e-08!61;UBERON:0004535!3.44e-08!110;UBERON:0001009!4.60e-08!113;UBERON:0001444!1.02e-07!48;UBERON:0006914!1.16e-07!25;UBERON:0004923!1.20e-07!57;UBERON:0000165!2.00e-07!28;UBERON:0000930!2.00e-07!28;UBERON:0002050!2.49e-07!605;UBERON:0005423!2.49e-07!605;UBERON:0000923!3.59e-07!604;UBERON:0005291!3.59e-07!604;UBERON:0006598!3.59e-07!604;UBERON:0002532!3.59e-07!604;UBERON:0003914!3.75e-07!118;UBERON:0000922!7.87e-07!612 | |ontology_enrichment_uberon=UBERON:0003102!5.36e-20!95;UBERON:0000475!2.07e-16!365;UBERON:0000914!1.51e-15!83;UBERON:0002329!1.51e-15!83;UBERON:0003077!1.51e-15!83;UBERON:0003059!1.51e-15!83;UBERON:0007282!1.51e-15!83;UBERON:0009618!1.51e-15!83;UBERON:0007285!1.51e-15!83;UBERON:0000468!5.59e-15!659;UBERON:0002049!8.63e-15!79;UBERON:0007798!8.63e-15!79;UBERON:0000486!1.02e-14!82;UBERON:0000055!1.15e-12!69;UBERON:0002199!1.39e-12!45;UBERON:0002416!1.39e-12!45;UBERON:0004290!4.90e-12!70;UBERON:0002100!5.99e-12!216;UBERON:0005256!1.05e-11!143;UBERON:0000119!1.11e-11!312;UBERON:0000490!2.63e-11!138;UBERON:0000467!3.83e-11!625;UBERON:0000483!4.24e-11!309;UBERON:0000480!4.70e-11!626;UBERON:0002097!6.96e-11!40;UBERON:0004872!7.16e-11!84;UBERON:0000481!7.18e-11!347;UBERON:0001981!1.17e-09!60;UBERON:0007500!1.17e-09!60;UBERON:0004537!1.17e-09!60;UBERON:0006965!1.17e-09!60;UBERON:0003104!2.54e-09!238;UBERON:0009142!2.54e-09!238;UBERON:0001986!3.57e-09!18;UBERON:0004638!3.57e-09!18;UBERON:0004852!3.57e-09!18;UBERON:0000477!1.53e-08!286;UBERON:0000487!1.53e-08!22;UBERON:0002385!1.99e-08!63;UBERON:0001015!1.99e-08!63;UBERON:0000383!1.99e-08!63;UBERON:0001134!2.80e-08!61;UBERON:0002036!2.80e-08!61;UBERON:0003082!2.80e-08!61;UBERON:0004535!3.44e-08!110;UBERON:0001009!4.60e-08!113;UBERON:0001444!1.02e-07!48;UBERON:0006914!1.16e-07!25;UBERON:0004923!1.20e-07!57;UBERON:0000165!2.00e-07!28;UBERON:0000930!2.00e-07!28;UBERON:0002050!2.49e-07!605;UBERON:0005423!2.49e-07!605;UBERON:0000923!3.59e-07!604;UBERON:0005291!3.59e-07!604;UBERON:0006598!3.59e-07!604;UBERON:0002532!3.59e-07!604;UBERON:0003914!3.75e-07!118;UBERON:0000922!7.87e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.09e-09;18!UBERON:0001986;3.09e-09;18!UBERON:0004852;3.09e-09;18!UBERON:0002199;3.79e-09;46!UBERON:0002416;3.79e-09;46!UBERON:0002097;5.15e-09;41!UBERON:0000487;1.35e-08;22!UBERON:0003102;1.74e-08;50!UBERON:0006914;9.65e-08;25!UBERON:0000165;1.78e-07;28!UBERON:0000490;1.84e-07;33!UBERON:0000055;2.95e-07;65!UBERON:0002049;4.16e-07;75!UBERON:0007798;4.16e-07;75!UBERON:0004923;4.92e-07;55!UBERON:0003729;7.94e-07;13!UBERON:0002385;8.52e-07;31!UBERON:0001015;8.52e-07;31!UBERON:0000383;8.52e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.09e-09;18!UBERON:0001986;3.09e-09;18!UBERON:0004852;3.09e-09;18!UBERON:0002199;3.79e-09;46!UBERON:0002416;3.79e-09;46!UBERON:0002097;5.15e-09;41!UBERON:0000487;1.35e-08;22!UBERON:0003102;1.74e-08;50!UBERON:0006914;9.65e-08;25!UBERON:0000165;1.78e-07;28!UBERON:0000490;1.84e-07;33!UBERON:0000055;2.95e-07;65!UBERON:0002049;4.16e-07;75!UBERON:0007798;4.16e-07;75!UBERON:0004923;4.92e-07;55!UBERON:0003729;7.94e-07;13!UBERON:0002385;8.52e-07;31!UBERON:0001015;8.52e-07;31!UBERON:0000383;8.52e-07;31 | ||
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| ||
|short_description=p2@CAV1 | |short_description=p2@CAV1 | ||
}} | }} |
Latest revision as of 07:23, 25 September 2015
Short description: | p2@CAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393470, ENST00000451122, ENST00000489856, NM_001172895, uc003vig.1_5end |
EntrezGene: | CAV1 |
HGNC: | 1527 |
UniProt: | E9PCT5F8WDM7Q2TNI1Q59E85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.38e-21 | 250 |
mesodermal cell | 3.53e-17 | 121 |
fibroblast | 3.10e-14 | 76 |
squamous epithelial cell | 7.39e-14 | 63 |
endothelial cell of vascular tree | 3.59e-13 | 24 |
epithelial cell | 4.50e-10 | 253 |
endothelial cell | 5.27e-10 | 36 |
skin fibroblast | 1.81e-09 | 23 |
lining cell | 2.14e-09 | 58 |
barrier cell | 2.14e-09 | 58 |
blood vessel endothelial cell | 3.07e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.07e-09 | 18 |
muscle precursor cell | 7.14e-09 | 58 |
myoblast | 7.14e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.14e-09 | 58 |
meso-epithelial cell | 3.52e-08 | 45 |
muscle cell | 9.42e-08 | 55 |