FFCP PHASE1:Mm9::chr7:26101936..26101987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269878 | |EntrezGene=269878 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=347 | |MCL_coexpression_id=347 | ||
|TSSclassifier=NA | |||
|UniProt=P60882 | |UniProt=P60882 | ||
|association_with_transcript=-195bp_to_ENSMUST00000128119,NM_001160400,uc009fsj.2_5end | |association_with_transcript=-195bp_to_ENSMUST00000128119,NM_001160400,uc009fsj.2_5end | ||
|cluster_id=chr7:26101936..26101987,+ | |||
|description=CAGE_peak_3_at_Megf8_5end | |description=CAGE_peak_3_at_Megf8_5end | ||
|id=chr7:26101936..26101987,+ | |id=chr7:26101936..26101987,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.52e-19!50;CL:0000221!4.38e-19!44;CL:0000133!4.38e-19!44;CL:0002319!7.90e-19!43;CL:0000393!3.49e-15!39;CL:0000211!3.49e-15!39;CL:0000540!3.23e-14!33;CL:0000047!3.23e-14!33;CL:0000031!3.23e-14!33;CL:0000404!3.23e-14!33;CL:0000117!8.03e-13!23;CL:0000337!8.03e-13!23;CL:0002321!2.30e-10!70;CL:0000220!2.30e-10!70 | |ontology_enrichment_celltype=CL:0000055!3.52e-19!50;CL:0000221!4.38e-19!44;CL:0000133!4.38e-19!44;CL:0002319!7.90e-19!43;CL:0000393!3.49e-15!39;CL:0000211!3.49e-15!39;CL:0000540!3.23e-14!33;CL:0000047!3.23e-14!33;CL:0000031!3.23e-14!33;CL:0000404!3.23e-14!33;CL:0000117!8.03e-13!23;CL:0000337!8.03e-13!23;CL:0002321!2.30e-10!70;CL:0000220!2.30e-10!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.64e-19,44;CL:0000133,1.64e-19,44;CL:0002319,3.06e-19,43;CL:0000393,8.31e-16,39;CL:0000211,8.31e-16,39;CL:0000540,8.50e-15,33;CL:0000047,8.50e-15,33;CL:0000031,8.50e-15,33;CL:0000404,8.50e-15,33;CL:0000117,2.45e-13,23;CL:0000337,2.45e-13,23;CL:0002321,1.31e-11,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.24e-34!73;UBERON:0005743!2.24e-34!73;UBERON:0000073!6.42e-34!75;UBERON:0001016!6.42e-34!75;UBERON:0004121!5.82e-32!102;UBERON:0000924!5.82e-32!102;UBERON:0006601!5.82e-32!102;UBERON:0002346!1.77e-28!71;UBERON:0003075!1.77e-28!71;UBERON:0007284!1.77e-28!71;UBERON:0001049!4.86e-25!52;UBERON:0005068!4.86e-25!52;UBERON:0006241!4.86e-25!52;UBERON:0007135!4.86e-25!52;UBERON:0000033!5.47e-25!63;UBERON:0000955!2.37e-23!50;UBERON:0006238!2.37e-23!50;UBERON:0002616!6.02e-23!49;UBERON:0003056!3.06e-19!49;UBERON:0003080!3.67e-17!40;UBERON:0002780!1.59e-16!39;UBERON:0001890!1.59e-16!39;UBERON:0006240!1.59e-16!39;UBERON:0002020!5.73e-16!34;UBERON:0002791!1.07e-12!29;UBERON:0003528!1.07e-12!29;UBERON:0001893!1.07e-12!29;UBERON:0007811!3.84e-12!86;UBERON:0000153!1.67e-11!94;UBERON:0000025!2.50e-09!114;UBERON:0003076!1.37e-08!12;UBERON:0003057!1.37e-08!12;UBERON:0004111!1.70e-08!122;UBERON:0000956!2.88e-08!21;UBERON:0001869!2.88e-08!21;UBERON:0000203!2.88e-08!21;UBERON:0002619!1.78e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!2.24e-34!73;UBERON:0005743!2.24e-34!73;UBERON:0000073!6.42e-34!75;UBERON:0001016!6.42e-34!75;UBERON:0004121!5.82e-32!102;UBERON:0000924!5.82e-32!102;UBERON:0006601!5.82e-32!102;UBERON:0002346!1.77e-28!71;UBERON:0003075!1.77e-28!71;UBERON:0007284!1.77e-28!71;UBERON:0001049!4.86e-25!52;UBERON:0005068!4.86e-25!52;UBERON:0006241!4.86e-25!52;UBERON:0007135!4.86e-25!52;UBERON:0000033!5.47e-25!63;UBERON:0000955!2.37e-23!50;UBERON:0006238!2.37e-23!50;UBERON:0002616!6.02e-23!49;UBERON:0003056!3.06e-19!49;UBERON:0003080!3.67e-17!40;UBERON:0002780!1.59e-16!39;UBERON:0001890!1.59e-16!39;UBERON:0006240!1.59e-16!39;UBERON:0002020!5.73e-16!34;UBERON:0002791!1.07e-12!29;UBERON:0003528!1.07e-12!29;UBERON:0001893!1.07e-12!29;UBERON:0007811!3.84e-12!86;UBERON:0000153!1.67e-11!94;UBERON:0000025!2.50e-09!114;UBERON:0003076!1.37e-08!12;UBERON:0003057!1.37e-08!12;UBERON:0004111!1.70e-08!122;UBERON:0000956!2.88e-08!21;UBERON:0001869!2.88e-08!21;UBERON:0000203!2.88e-08!21;UBERON:0002619!1.78e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.91e-36,73;UBERON:0001016,5.38e-35,75;UBERON:0004121,2.21e-31,95;UBERON:0000924,2.21e-31,95;UBERON:0006601,2.21e-31,95;UBERON:0002346,9.64e-30,64;UBERON:0003075,9.64e-30,64;UBERON:0007284,9.64e-30,64;UBERON:0000073,1.01e-27,54;UBERON:0001049,4.06e-26,52;UBERON:0005068,4.06e-26,52;UBERON:0006241,4.06e-26,52;UBERON:0007135,4.06e-26,52;UBERON:0010314,2.97e-25,92;UBERON:0010371,1.16e-24,73;UBERON:0000955,3.19e-22,47;UBERON:0006238,3.19e-22,47;UBERON:0002616,8.30e-22,46;UBERON:0003056,4.73e-20,49;UBERON:0003080,7.09e-18,40;UBERON:0002780,3.28e-17,39;UBERON:0001890,3.28e-17,39;UBERON:0006240,3.28e-17,39;UBERON:0002020,1.26e-16,34;UBERON:0003528,3.32e-13,29;UBERON:0002791,3.32e-13,29;UBERON:0001893,3.32e-13,29;UBERON:0000025,1.60e-09,114;UBERON:0003076,6.54e-09,12;UBERON:0003057,6.54e-09,12;UBERON:0000956,1.42e-08,21;UBERON:0001869,1.42e-08,21;UBERON:0000203,1.42e-08,21;UBERON:0004111,1.55e-08,122;UBERON:0002619,9.53e-08,17 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,3.48677489619386,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0,1.90509202037889,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,2.39203954153597,2.73717714292689,3.85448179539531,14.8654355426127,8.50298109883741,14.7189742432096,15.5543919259427,6.15940255151595,10.062679505548,0,0,0,3.34437266846731,2.0057340795713,4.64104883049698,8.9019242778223,6.87688273053643,4.43681982454325,4.06613438482959,5.33576877666684,2.6996991518442,3.9554654502679,6.3943210345149,10.4860038681442,17.6740420447915,3.11068836925433,3.51015439662396,2.10324961351382,15.4251531578054,15.2399293256613,3.30725157880376,4.79227355091182,4.5960939330501,13.2139057199266,10.9811110753261,10.4452442614246,10.2871304429551,9.42322729104819,14.0646610050325,14.2383329490704,18.5711661310454,17.5717984943332,14.4368006882097,10.8202477407318,11.9295645328192,0.984440513331393,2.94729084416464,4.34796733052517,0.860423876981386,0,0,0,0,0.702222100658759,4.4311883870295,2.33807404142582,2.47337702157238,3.38024207464033,5.13305909657271,2.54805239706646,7.11066703153331,2.16491041011214,1.01343946190039,1.01104889002957,0.45673551887624,0.776813650941515,4.15637989381509,1.73485326766136,2.43572382649713,1.84492397804847,1.95939432718409,2.11659672844269,2.26199864393416,0.494389935468748,0.86759614151947,0.884610551949874,1.29413479957927,0.883366073841574,0.484875253135222,1.86391761218122,12.5895742714965,9.63454851341893,0.510914110417183,0.359445373517761,0,0.635351135365324,10.9347166765521,7.32000964509802,3.14135880282161,5.21472960576829,4.60287823194595,8.10373373782284,5.353961681236,2.54598409625791,2.48813941220186,1.51633655060205,1.26265113531884,2.34216797332867,4.13823787980251,3.06105620669094,3.91832526372859,4.89862793889561,4.35586648968489,5.43470002446427,3.10444044886819,0.862271971731369,2.08016688184601,2.11141348996739,1.53437012699302,1.66828349535359,2.089512999133,1.64625709126355,1.99034266818493,0,0.257347907114715,0.568326998791185,1.24275463521301,1.17263029990548,1.62055855314913,1.65721314909647,1.77087808572663,1.85120535464854,1.62773761325285,1.07309360559848,1.86824547787471,0.987359099480883,1.14917224855367,1.05389452409612,1.02339991197733,0.878200461164203,2.14730270016595,4.41608891984667,3.70456604565424,0,0,1.70630600428187,3.0190767341857,1.41754207454303,0.605050573870028,1.55664630691409,1.14135375667535,1.42358718463353,0.329397909448022,1.00534083520108,0.994782360205754,0.779856348476481,0.898819408654221,1.08069024937347,0.398282546508734,1.13800740571849,1.71372768914593,0,2.24016460629846,3.29719228184964,2.45475369616115,2.71917109634306,1.18088118383682,1.41298855057237,1.1105744752962,0.592905254174298,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0,0.863088412352432,0.486405680325106,0,0,1.48856379067401,0.312037673114561,0.252578877947112,0.358794827043824,0,1.47802552133284,2.65287976478679,2.77040459951444,1.86719594352707,0.938760993154008,1.50755631697634,0.714130922658041,1.95133647857799,2.67979744980525,2.87904096543407,2.23236676120482,2.94953966488328,0.863424909329478,1.73578870297814,1.50791283939272,0.54390568381871,0.491764273019036,0.551873492609465,7.70642831941401,7.14991288212439,1.63934945376675,1.51482556322624,4.10160685241134,4.29482618726302,3.66219776145758,2.86762557543062,4.23317480756549,3.96307143104365,1.61924280669958,4.09158201075837,1.97643888973262,4.17717711348349,3.40656204499845,3.38324646967785,3.90928702448583,2.96946221350564,1.32745138339963,1.21390318077491,0.604647113929502,0.754420319023592,0.295301892880773,1.22974059177571,1.80899805217755,0.363533729477506,0.356497378384721,0.632073515871632,0,0,5.10659408630682,3.24109969256358,3.49268446213437,3.42939256050548,3.3694644392032,6.42127743367454,3.62007845324666,7.00269382963578,0.469343416127421,1.69465656691056,0.441056796109924,0.65954501176592,1.29171541356724,1.08563264870681,1.43246812803764,0.984845398470368,1.1659233465194,6.11903496634682,0.512612642393558,1.23832120777933,1.11116716421827,0.188368457004691,0.27338845544205,0.228778173206523,1.01987057996313,0.69975726161829,0.552799895217695,0.954670618015114,2.84702394223022,1.82987520414164,0.756037385752609,2.09088296014469,1.31017538247707,1.61837215661785,0.991841468704031,0.785267825952089,0.90730481304255,1.24267862617385,2.81846469342095,1.94371509857172,1.48912641411388,2.13896307178452,2.19571699912143,1.85851738039856,2.8165737274981,2.604087696879,2.30690557736564,4.83168241652012,2.88030006257865,0.316011120628178,2.8381530140623,1.33524244314275,0.51968329191118,1.25318686967237,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0,0.116876902181569,1.58711268530648,0.887943813496259,0.717710852875806,1.17519231454855,1.35232715822533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| ||
|short_description=p3@Megf8 | |short_description=p3@Megf8 | ||
}} | }} |
Latest revision as of 10:34, 26 September 2015
Short description: | p3@Megf8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Megf8_5end |
Coexpression cluster: | MCL_coexpression_mm9:347 |
Association with transcript: | -195bp_to_ENSMUST00000128119, NM_001160400, uc009fsj.2_5end |
EntrezGene: | Megf8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.64e-19 | 44 |
neurectodermal cell | 1.64e-19 | 44 |
neural cell | 3.06e-19 | 43 |
electrically responsive cell | 8.31e-16 | 39 |
electrically active cell | 8.31e-16 | 39 |
neuron | 8.50e-15 | 33 |
neuronal stem cell | 8.50e-15 | 33 |
neuroblast | 8.50e-15 | 33 |
electrically signaling cell | 8.50e-15 | 33 |
CNS neuron (sensu Vertebrata) | 2.45e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.45e-13 | 23 |
embryonic cell | 1.31e-11 | 70 |