FFCP PHASE1:Mm9::chr11:4886886..4886897,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11764 | |EntrezGene=11764 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=247 | |MCL_coexpression_id=247 | ||
|TSSclassifier=NA | |||
|UniProt=O35643 | |UniProt=O35643 | ||
|association_with_transcript=-10bp_to_ENSMUST00000009234,uc007hvo.1,uc007hvp.1_5end | |association_with_transcript=-10bp_to_ENSMUST00000009234,uc007hvo.1,uc007hvp.1_5end | ||
|cluster_id=chr11:4886886..4886897,+ | |||
|description=CAGE_peak_3_at_Ap1b1_5end | |description=CAGE_peak_3_at_Ap1b1_5end | ||
|id=chr11:4886886..4886897,+ | |id=chr11:4886886..4886897,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.17e-16!50;CL:0002319!2.59e-15!43;CL:0000221!1.29e-14!44;CL:0000133!1.29e-14!44;CL:0000393!1.38e-12!39;CL:0000211!1.38e-12!39;CL:0000540!1.28e-10!33;CL:0000047!1.28e-10!33;CL:0000031!1.28e-10!33;CL:0000404!1.28e-10!33;CL:0000117!1.73e-08!23;CL:0000337!1.73e-08!23;CL:0002321!2.61e-07!70;CL:0000220!2.61e-07!70 | |ontology_enrichment_celltype=CL:0000055!1.17e-16!50;CL:0002319!2.59e-15!43;CL:0000221!1.29e-14!44;CL:0000133!1.29e-14!44;CL:0000393!1.38e-12!39;CL:0000211!1.38e-12!39;CL:0000540!1.28e-10!33;CL:0000047!1.28e-10!33;CL:0000031!1.28e-10!33;CL:0000404!1.28e-10!33;CL:0000117!1.73e-08!23;CL:0000337!1.73e-08!23;CL:0002321!2.61e-07!70;CL:0000220!2.61e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.36e-15,43;CL:0000221,1.18e-14,44;CL:0000133,1.18e-14,44;CL:0000393,1.28e-12,39;CL:0000211,1.28e-12,39;CL:0000540,1.20e-10,33;CL:0000047,1.20e-10,33;CL:0000031,1.20e-10,33;CL:0000404,1.20e-10,33;CL:0000117,1.65e-08,23;CL:0000337,1.65e-08,23;CL:0002321,1.70e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.56e-23!75;UBERON:0001016!7.56e-23!75;UBERON:0004121!4.36e-22!102;UBERON:0000924!4.36e-22!102;UBERON:0006601!4.36e-22!102;UBERON:0001017!6.66e-22!73;UBERON:0005743!6.66e-22!73;UBERON:0002346!2.95e-17!71;UBERON:0003075!2.95e-17!71;UBERON:0007284!2.95e-17!71;UBERON:0002020!3.13e-15!34;UBERON:0001049!2.34e-14!52;UBERON:0005068!2.34e-14!52;UBERON:0006241!2.34e-14!52;UBERON:0007135!2.34e-14!52;UBERON:0000955!2.97e-14!50;UBERON:0006238!2.97e-14!50;UBERON:0002791!7.26e-14!29;UBERON:0003528!7.26e-14!29;UBERON:0001893!7.26e-14!29;UBERON:0002616!9.90e-14!49;UBERON:0000033!2.29e-12!63;UBERON:0003056!2.78e-11!49;UBERON:0000956!4.02e-11!21;UBERON:0001869!4.02e-11!21;UBERON:0000203!4.02e-11!21;UBERON:0003080!9.02e-11!40;UBERON:0002780!2.33e-10!39;UBERON:0001890!2.33e-10!39;UBERON:0006240!2.33e-10!39;UBERON:0002619!2.98e-09!17;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!7.56e-23!75;UBERON:0001016!7.56e-23!75;UBERON:0004121!4.36e-22!102;UBERON:0000924!4.36e-22!102;UBERON:0006601!4.36e-22!102;UBERON:0001017!6.66e-22!73;UBERON:0005743!6.66e-22!73;UBERON:0002346!2.95e-17!71;UBERON:0003075!2.95e-17!71;UBERON:0007284!2.95e-17!71;UBERON:0002020!3.13e-15!34;UBERON:0001049!2.34e-14!52;UBERON:0005068!2.34e-14!52;UBERON:0006241!2.34e-14!52;UBERON:0007135!2.34e-14!52;UBERON:0000955!2.97e-14!50;UBERON:0006238!2.97e-14!50;UBERON:0002791!7.26e-14!29;UBERON:0003528!7.26e-14!29;UBERON:0001893!7.26e-14!29;UBERON:0002616!9.90e-14!49;UBERON:0000033!2.29e-12!63;UBERON:0003056!2.78e-11!49;UBERON:0000956!4.02e-11!21;UBERON:0001869!4.02e-11!21;UBERON:0000203!4.02e-11!21;UBERON:0003080!9.02e-11!40;UBERON:0002780!2.33e-10!39;UBERON:0001890!2.33e-10!39;UBERON:0006240!2.33e-10!39;UBERON:0002619!2.98e-09!17;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.54e-23,75;UBERON:0001017,5.81e-22,73;UBERON:0004121,1.56e-20,95;UBERON:0000924,1.56e-20,95;UBERON:0006601,1.56e-20,95;UBERON:0002346,7.23e-16,64;UBERON:0003075,7.23e-16,64;UBERON:0007284,7.23e-16,64;UBERON:0000073,2.63e-15,54;UBERON:0002020,2.85e-15,34;UBERON:0001049,2.15e-14,52;UBERON:0005068,2.15e-14,52;UBERON:0006241,2.15e-14,52;UBERON:0007135,2.15e-14,52;UBERON:0010371,2.37e-14,73;UBERON:0003528,6.68e-14,29;UBERON:0002791,6.68e-14,29;UBERON:0001893,6.68e-14,29;UBERON:0010314,4.26e-13,92;UBERON:0000955,5.40e-13,47;UBERON:0006238,5.40e-13,47;UBERON:0002616,1.75e-12,46;UBERON:0003056,2.60e-11,49;UBERON:0000956,3.77e-11,21;UBERON:0001869,3.77e-11,21;UBERON:0000203,3.77e-11,21;UBERON:0003080,8.47e-11,40;UBERON:0002780,2.20e-10,39;UBERON:0001890,2.20e-10,39;UBERON:0006240,2.20e-10,39;UBERON:0002619,2.83e-09,17;UBERON:0002021,4.43e-07,10;UBERON:0000411,4.43e-07,10;UBERON:0001950,4.43e-07,10 | |||
|phase1_expression=2.7225304007815,1.04692622291808,0.454999239389536,0.60492842261366,1.50268718983904,0.33575854382378,0.467225281191051,0.903863264091034,0.281577444303333,0,0.856089841127525,0.797721589953364,0.684802919724823,0.699363219351979,3.66420737997229,4.25198061518635,1.39912375625629,1.89277299214943,1.64537320326887,2.54633791078818,1.9559956734746,1.58865521921416,2.61199789138935,0.799962113967033,0.91763712426868,0.57423196411502,0.430761996159075,0.215471232685889,0.950117097281869,0.252030129759931,0.221730510655305,3.81018404075779,4.30545351309199,0,0.288851619751275,0.332469290716985,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0.971020706062307,6.79842817068117,5.47435428585379,3.30384153891027,4.69434806608824,10.0291571935005,5.71184075109627,4.08302788055995,6.99932108126813,8.62515386189829,0.503347818173209,2.17608642603403,1.00828139742739,4.63066984864705,6.87680255853016,4.64104883049698,4.45096213891115,2.64495489636016,6.33831403506179,3.72728985276045,7.11435836888911,17.0980946283466,23.7327927016074,22.0248835633291,9.58720353658895,8.4528027170742,5.08079100311541,6.48028503992115,7.57169860864975,5.14171771926846,4.63823935998388,4.16468717330844,5.84657373211242,4.5960939330501,7.70811166995721,4.97980618532232,4.91540906419979,3.82470234417562,4.57438218012048,6.25096044668112,5.58365998002762,5.6276261003168,6.1119299110724,7.07108605136802,5.26775218956681,2.98239113320481,5.30083353332288,5.44115232768856,9.56552812715537,1.72084775396277,0,1.07940638327563,1.29955283489534,0.896053774194671,1.82577746171277,3.91989741929533,1.55871602761721,3.18005617059306,1.83096445709685,5.13305909657271,12.7402619853323,7.11066703153331,0.865964164044856,1.52015919285059,0.505524445014783,1.48439043634778,2.07150306917737,3.26572705942614,3.12273588179045,5.48037860961854,6.45723392316964,3.3158980921577,3.76283862834255,4.90099706185734,3.46072954828123,2.31358971071859,1.76922110389975,2.91180329905337,2.87093973998512,2.90925151881133,1.86391761218122,4.68449275218475,2.51336048176146,1.27728527604296,2.75574786363617,2.39961092397363,2.41433431438823,5.54225365797844,7.77751024791665,3.8952849154988,5.9100268865374,4.85859368927628,3.94797284663164,6.00292673350703,3.25885964321012,2.61254638281195,0.758168275301024,1.47309299120532,4.16385417480652,2.29902104433473,3.06105620669094,4.67184935290717,4.28629944653366,4.35586648968489,4.2165776051878,6.72628763921441,2.37124792226126,2.64748512234947,4.22282697993477,2.84954452155847,4.44875598760957,4.179025998266,4.11564272815887,3.58261680273288,2.1066395619397,2.31613116403244,3.12579849335152,2.69263504296152,3.75241695969754,2.16074473753218,2.60419209143731,2.36117078096885,2.46827380619805,2.55787339225449,1.87791380979733,2.56883753207773,2.30383789878873,2.46251196118643,1.94565142910054,2.04679982395465,1.75640092232841,2.81833479396781,7.36014819974445,5.55684906848136,0.660837565967596,1.85115396664481,2.13288250535234,2.55460339046482,2.06187938115349,3.02525286935014,1.77902435075896,1.14135375667535,3.79623249235609,2.14108641141214,2.01068167040216,2.58643413653496,1.9496408711912,2.69645822596266,1.72910439899755,1.1948476395262,2.27601481143698,2.97046132785295,7.88954149711563,2.44381593414377,2.71533482034676,2.59502533594179,2.52946148497029,1.47610147979602,2.82597710114475,1.48076596706161,0.889357881261447,2.33583148002532,2.35870794135844,2.69834534861824,3.24576194221605,2.65294875727659,1.01850340712568,2.30156909960649,0.972811360650212,1.37280706594041,2.87536413054709,2.23284568601102,2.49630138491648,0.757736633841335,1.07638448113147,1.4473305640901,0.923765950833023,3.22135400009824,3.09633455239849,4.07388205860452,3.05097322775053,0.670025029767263,3.80869825417622,3.12213836572478,4.57141917907954,3.76489972402917,2.55127629851979,1.47476983244164,2.93564469172023,2.31438493730419,13.5712155545345,10.3342079925555,2.45882136509518,0.551873492609465,5.45872005958493,5.04010252346474,2.13115428989678,2.01976741763498,4.73262329124385,3.90438744296638,4.95473814785438,4.54040716109849,5.79276552614225,7.35998980050964,4.45291771842384,4.67609372658099,3.16230222357219,7.06906896127976,2.83880170416537,4.27357448801413,4.56083486190013,2.8044920905331,1.32745138339963,4.12727081463468,0.906970670894253,1.88605079755898,2.65771703592696,1.22974059177571,2.58428293168221,0.727067458955011,2.85197902707777,0.948110273807448,0,2.06271086496374,1.02131881726136,1.62054984628179,3.75140182969988,2.35770738534752,2.30542303734956,3.0322698992352,2.46823530903181,1.522324745573,2.3467170806371,2.33015277950202,1.32317038832977,3.2977250588296,3.39075296061402,2.41251699712623,4.65552141612232,4.10352249362653,1.45740418314925,5.19190845629427,2.9048049735635,3.30218988741156,3.88908507476395,3.95573759709851,4.64760374251486,2.74533807847827,1.86976272993241,2.37917468950219,1.10559979043539,3.81868247206045,3.16335993581135,2.23651413839534,2.59212817972323,3.13632444021703,1.74690050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| |phase1_expression=2.7225304007815,1.04692622291808,0.454999239389536,0.60492842261366,1.50268718983904,0.33575854382378,0.467225281191051,0.903863264091034,0.281577444303333,0,0.856089841127525,0.797721589953364,0.684802919724823,0.699363219351979,3.66420737997229,4.25198061518635,1.39912375625629,1.89277299214943,1.64537320326887,2.54633791078818,1.9559956734746,1.58865521921416,2.61199789138935,0.799962113967033,0.91763712426868,0.57423196411502,0.430761996159075,0.215471232685889,0.950117097281869,0.252030129759931,0.221730510655305,3.81018404075779,4.30545351309199,0,0.288851619751275,0.332469290716985,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0.971020706062307,6.79842817068117,5.47435428585379,3.30384153891027,4.69434806608824,10.0291571935005,5.71184075109627,4.08302788055995,6.99932108126813,8.62515386189829,0.503347818173209,2.17608642603403,1.00828139742739,4.63066984864705,6.87680255853016,4.64104883049698,4.45096213891115,2.64495489636016,6.33831403506179,3.72728985276045,7.11435836888911,17.0980946283466,23.7327927016074,22.0248835633291,9.58720353658895,8.4528027170742,5.08079100311541,6.48028503992115,7.57169860864975,5.14171771926846,4.63823935998388,4.16468717330844,5.84657373211242,4.5960939330501,7.70811166995721,4.97980618532232,4.91540906419979,3.82470234417562,4.57438218012048,6.25096044668112,5.58365998002762,5.6276261003168,6.1119299110724,7.07108605136802,5.26775218956681,2.98239113320481,5.30083353332288,5.44115232768856,9.56552812715537,1.72084775396277,0,1.07940638327563,1.29955283489534,0.896053774194671,1.82577746171277,3.91989741929533,1.55871602761721,3.18005617059306,1.83096445709685,5.13305909657271,12.7402619853323,7.11066703153331,0.865964164044856,1.52015919285059,0.505524445014783,1.48439043634778,2.07150306917737,3.26572705942614,3.12273588179045,5.48037860961854,6.45723392316964,3.3158980921577,3.76283862834255,4.90099706185734,3.46072954828123,2.31358971071859,1.76922110389975,2.91180329905337,2.87093973998512,2.90925151881133,1.86391761218122,4.68449275218475,2.51336048176146,1.27728527604296,2.75574786363617,2.39961092397363,2.41433431438823,5.54225365797844,7.77751024791665,3.8952849154988,5.9100268865374,4.85859368927628,3.94797284663164,6.00292673350703,3.25885964321012,2.61254638281195,0.758168275301024,1.47309299120532,4.16385417480652,2.29902104433473,3.06105620669094,4.67184935290717,4.28629944653366,4.35586648968489,4.2165776051878,6.72628763921441,2.37124792226126,2.64748512234947,4.22282697993477,2.84954452155847,4.44875598760957,4.179025998266,4.11564272815887,3.58261680273288,2.1066395619397,2.31613116403244,3.12579849335152,2.69263504296152,3.75241695969754,2.16074473753218,2.60419209143731,2.36117078096885,2.46827380619805,2.55787339225449,1.87791380979733,2.56883753207773,2.30383789878873,2.46251196118643,1.94565142910054,2.04679982395465,1.75640092232841,2.81833479396781,7.36014819974445,5.55684906848136,0.660837565967596,1.85115396664481,2.13288250535234,2.55460339046482,2.06187938115349,3.02525286935014,1.77902435075896,1.14135375667535,3.79623249235609,2.14108641141214,2.01068167040216,2.58643413653496,1.9496408711912,2.69645822596266,1.72910439899755,1.1948476395262,2.27601481143698,2.97046132785295,7.88954149711563,2.44381593414377,2.71533482034676,2.59502533594179,2.52946148497029,1.47610147979602,2.82597710114475,1.48076596706161,0.889357881261447,2.33583148002532,2.35870794135844,2.69834534861824,3.24576194221605,2.65294875727659,1.01850340712568,2.30156909960649,0.972811360650212,1.37280706594041,2.87536413054709,2.23284568601102,2.49630138491648,0.757736633841335,1.07638448113147,1.4473305640901,0.923765950833023,3.22135400009824,3.09633455239849,4.07388205860452,3.05097322775053,0.670025029767263,3.80869825417622,3.12213836572478,4.57141917907954,3.76489972402917,2.55127629851979,1.47476983244164,2.93564469172023,2.31438493730419,13.5712155545345,10.3342079925555,2.45882136509518,0.551873492609465,5.45872005958493,5.04010252346474,2.13115428989678,2.01976741763498,4.73262329124385,3.90438744296638,4.95473814785438,4.54040716109849,5.79276552614225,7.35998980050964,4.45291771842384,4.67609372658099,3.16230222357219,7.06906896127976,2.83880170416537,4.27357448801413,4.56083486190013,2.8044920905331,1.32745138339963,4.12727081463468,0.906970670894253,1.88605079755898,2.65771703592696,1.22974059177571,2.58428293168221,0.727067458955011,2.85197902707777,0.948110273807448,0,2.06271086496374,1.02131881726136,1.62054984628179,3.75140182969988,2.35770738534752,2.30542303734956,3.0322698992352,2.46823530903181,1.522324745573,2.3467170806371,2.33015277950202,1.32317038832977,3.2977250588296,3.39075296061402,2.41251699712623,4.65552141612232,4.10352249362653,1.45740418314925,5.19190845629427,2.9048049735635,3.30218988741156,3.88908507476395,3.95573759709851,4.64760374251486,2.74533807847827,1.86976272993241,2.37917468950219,1.10559979043539,3.81868247206045,3.16335993581135,2.23651413839534,2.59212817972323,3.13632444021703,1.74690050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| ||
|short_description=p3@Ap1b1 | |short_description=p3@Ap1b1 | ||
}} | }} |
Latest revision as of 14:14, 1 October 2015
Short description: | p3@Ap1b1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ap1b1_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | -10bp_to_ENSMUST00000009234, uc007hvo.1, uc007hvp.1_5end |
EntrezGene: | Ap1b1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.36e-15 | 43 |
ectodermal cell | 1.18e-14 | 44 |
neurectodermal cell | 1.18e-14 | 44 |
electrically responsive cell | 1.28e-12 | 39 |
electrically active cell | 1.28e-12 | 39 |
neuron | 1.20e-10 | 33 |
neuronal stem cell | 1.20e-10 | 33 |
neuroblast | 1.20e-10 | 33 |
electrically signaling cell | 1.20e-10 | 33 |
CNS neuron (sensu Vertebrata) | 1.65e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-08 | 23 |
embryonic cell | 1.70e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.54e-23 | 75 |
central nervous system | 5.81e-22 | 73 |
ectoderm-derived structure | 1.56e-20 | 95 |
ectoderm | 1.56e-20 | 95 |
presumptive ectoderm | 1.56e-20 | 95 |
neurectoderm | 7.23e-16 | 64 |
neural plate | 7.23e-16 | 64 |
presumptive neural plate | 7.23e-16 | 64 |
regional part of nervous system | 2.63e-15 | 54 |
gray matter | 2.85e-15 | 34 |
neural tube | 2.15e-14 | 52 |
neural rod | 2.15e-14 | 52 |
future spinal cord | 2.15e-14 | 52 |
neural keel | 2.15e-14 | 52 |
ecto-epithelium | 2.37e-14 | 73 |
brain grey matter | 6.68e-14 | 29 |
regional part of telencephalon | 6.68e-14 | 29 |
telencephalon | 6.68e-14 | 29 |
structure with developmental contribution from neural crest | 4.26e-13 | 92 |
brain | 5.40e-13 | 47 |
future brain | 5.40e-13 | 47 |
regional part of brain | 1.75e-12 | 46 |
pre-chordal neural plate | 2.60e-11 | 49 |
cerebral cortex | 3.77e-11 | 21 |
cerebral hemisphere | 3.77e-11 | 21 |
pallium | 3.77e-11 | 21 |
anterior neural tube | 8.47e-11 | 40 |
regional part of forebrain | 2.20e-10 | 39 |
forebrain | 2.20e-10 | 39 |
future forebrain | 2.20e-10 | 39 |
regional part of cerebral cortex | 2.83e-09 | 17 |
occipital lobe | 4.43e-07 | 10 |
visual cortex | 4.43e-07 | 10 |
neocortex | 4.43e-07 | 10 |