FFCP PHASE1:Mm9::chr7:134352086..134352157,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68449 | |EntrezGene=68449 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=247 | |MCL_coexpression_id=247 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BHL3 | |UniProt=Q8BHL3 | ||
|association_with_transcript=-104bp_to_ENSMUST00000035643,ENSMUST00000120705,NM_144522,uc009juo.2_5end | |association_with_transcript=-104bp_to_ENSMUST00000035643,ENSMUST00000120705,NM_144522,uc009juo.2_5end | ||
|cluster_id=chr7:134352086..134352157,- | |||
|description=CAGE_peak_2_at_Tbc1d10b_5end | |description=CAGE_peak_2_at_Tbc1d10b_5end | ||
|id=chr7:134352086..134352157,- | |id=chr7:134352086..134352157,- | ||
|ontology_enrichment_celltype=CL:0000221!1.35e-15!44;CL:0000133!1.35e-15!44;CL:0002319!1.67e-15!43;CL:0000540!7.33e-14!33;CL:0000047!7.33e-14!33;CL:0000031!7.33e-14!33;CL:0000404!7.33e-14!33;CL:0000055!3.51e-13!50;CL:0000117!5.01e-13!23;CL:0000337!5.01e-13!23;CL:0000393!2.37e-12!39;CL:0000211!2.37e-12!39 | |ontology_enrichment_celltype=CL:0000221!1.35e-15!44;CL:0000133!1.35e-15!44;CL:0002319!1.67e-15!43;CL:0000540!7.33e-14!33;CL:0000047!7.33e-14!33;CL:0000031!7.33e-14!33;CL:0000404!7.33e-14!33;CL:0000055!3.51e-13!50;CL:0000117!5.01e-13!23;CL:0000337!5.01e-13!23;CL:0000393!2.37e-12!39;CL:0000211!2.37e-12!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.35e-15,44;CL:0000133,1.35e-15,44;CL:0002319,1.67e-15,43;CL:0000540,7.33e-14,33;CL:0000047,7.33e-14,33;CL:0000031,7.33e-14,33;CL:0000404,7.33e-14,33;CL:0000117,5.01e-13,23;CL:0000337,5.01e-13,23;CL:0000393,2.37e-12,39;CL:0000211,2.37e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.34e-31!73;UBERON:0005743!2.34e-31!73;UBERON:0000073!4.11e-31!75;UBERON:0001016!4.11e-31!75;UBERON:0004121!1.80e-25!102;UBERON:0000924!1.80e-25!102;UBERON:0006601!1.80e-25!102;UBERON:0001049!3.02e-24!52;UBERON:0005068!3.02e-24!52;UBERON:0006241!3.02e-24!52;UBERON:0007135!3.02e-24!52;UBERON:0000955!3.13e-23!50;UBERON:0006238!3.13e-23!50;UBERON:0002616!8.38e-23!49;UBERON:0000033!1.79e-20!63;UBERON:0002346!6.48e-20!71;UBERON:0003075!6.48e-20!71;UBERON:0007284!6.48e-20!71;UBERON:0003080!1.24e-18!40;UBERON:0002780!4.52e-18!39;UBERON:0001890!4.52e-18!39;UBERON:0006240!4.52e-18!39;UBERON:0002020!9.25e-18!34;UBERON:0003056!1.84e-15!49;UBERON:0002791!2.39e-15!29;UBERON:0003528!2.39e-15!29;UBERON:0001893!2.39e-15!29;UBERON:0007811!2.49e-13!86;UBERON:0000153!5.00e-12!94;UBERON:0000956!8.18e-11!21;UBERON:0001869!8.18e-11!21;UBERON:0000203!8.18e-11!21;UBERON:0002619!1.78e-08!17 | |ontology_enrichment_uberon=UBERON:0001017!2.34e-31!73;UBERON:0005743!2.34e-31!73;UBERON:0000073!4.11e-31!75;UBERON:0001016!4.11e-31!75;UBERON:0004121!1.80e-25!102;UBERON:0000924!1.80e-25!102;UBERON:0006601!1.80e-25!102;UBERON:0001049!3.02e-24!52;UBERON:0005068!3.02e-24!52;UBERON:0006241!3.02e-24!52;UBERON:0007135!3.02e-24!52;UBERON:0000955!3.13e-23!50;UBERON:0006238!3.13e-23!50;UBERON:0002616!8.38e-23!49;UBERON:0000033!1.79e-20!63;UBERON:0002346!6.48e-20!71;UBERON:0003075!6.48e-20!71;UBERON:0007284!6.48e-20!71;UBERON:0003080!1.24e-18!40;UBERON:0002780!4.52e-18!39;UBERON:0001890!4.52e-18!39;UBERON:0006240!4.52e-18!39;UBERON:0002020!9.25e-18!34;UBERON:0003056!1.84e-15!49;UBERON:0002791!2.39e-15!29;UBERON:0003528!2.39e-15!29;UBERON:0001893!2.39e-15!29;UBERON:0007811!2.49e-13!86;UBERON:0000153!5.00e-12!94;UBERON:0000956!8.18e-11!21;UBERON:0001869!8.18e-11!21;UBERON:0000203!8.18e-11!21;UBERON:0002619!1.78e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.34e-31,73;UBERON:0001016,4.11e-31,75;UBERON:0004121,6.68e-26,95;UBERON:0000924,6.68e-26,95;UBERON:0006601,6.68e-26,95;UBERON:0000073,1.86e-25,54;UBERON:0001049,3.02e-24,52;UBERON:0005068,3.02e-24,52;UBERON:0006241,3.02e-24,52;UBERON:0007135,3.02e-24,52;UBERON:0000955,2.17e-21,47;UBERON:0006238,2.17e-21,47;UBERON:0002616,5.70e-21,46;UBERON:0002346,9.88e-21,64;UBERON:0003075,9.88e-21,64;UBERON:0007284,9.88e-21,64;UBERON:0010371,4.62e-19,73;UBERON:0003080,1.24e-18,40;UBERON:0002780,4.52e-18,39;UBERON:0001890,4.52e-18,39;UBERON:0006240,4.52e-18,39;UBERON:0002020,9.25e-18,34;UBERON:0010314,6.74e-16,92;UBERON:0003056,1.84e-15,49;UBERON:0003528,2.39e-15,29;UBERON:0002791,2.39e-15,29;UBERON:0001893,2.39e-15,29;UBERON:0000956,8.18e-11,21;UBERON:0001869,8.18e-11,21;UBERON:0000203,8.18e-11,21;UBERON:0002619,1.78e-08,17 | |||
|phase1_expression=8.96833543786846,6.2815573375085,3.63999391511629,4.23449895829562,4.50806156951712,4.70061961353291,3.73780224952841,5.81054955487093,5.20918271961167,1.40438715793196,2.91070545983358,3.43020283679947,8.38883576662908,6.38168937658681,6.32908547449759,5.26435695213547,5.59649502502517,9.30613387806801,8.08975158273859,11.0341309467488,7.73893940374735,6.25532992565577,3.6567970479451,2.55987876469451,1.83527424853736,6.31655160526522,6.03066794622705,2.37018355954478,3.99049180858385,3.78045194639896,2.88249663851896,5.08024538767705,9.22597181376855,0,3.75507105676657,3.32469290716985,2.6542016314108,21.7636447983192,15.626706890476,21.4644735029257,22.9410280332096,30.7370468231301,23.3044969454954,6.42073771675444,5.17022349219524,4.40512205188036,8.60630478782843,7.19483016055474,11.2039953194581,7.19390626574849,6.29938897314131,10.062679505548,10.0669563634642,6.5282592781021,7.73015738027667,5.91696702882678,7.16333599846892,11.3447860301037,19.624696703381,9.52183762689659,12.6766280701236,7.45457970552091,10.6715375533337,21.5975932147536,21.7550599764734,35.524005747305,15.8788058574755,24.974189845901,17.4198548678242,16.7407363531296,19.1395714829758,20.2812198926701,13.0312439161452,13.5964787128599,13.0349840584801,13.7882817991503,12.1127469099328,22.0899094887375,18.4327839907492,16.2220133908138,16.5592634920361,13.022834263919,29.5933978941464,18.0084035210138,20.3221669543157,12.9636577608414,13.2405663143166,13.2343606535963,7.72407171998477,5.81901012822248,5.50742528533188,1.72084775396277,2.03991400112325,0.539703191637817,1.29955283489534,2.68816132258401,4.21333260395256,3.40860645156115,5.97507810586598,4.24007489412408,7.60554466794075,8.98285341900225,7.64415719119937,7.11066703153331,4.97929394325792,3.80039798212648,6.57181778519218,3.53970027129086,2.84831672011889,7.42210695324124,6.41895709034703,6.69824052286711,5.5347719341454,6.33035090321015,5.40908052824242,7.53999547978053,4.94389935468748,2.60278842455841,8.84610551949874,6.63244084784378,8.39197770149496,3.87900202508178,7.45567044872489,13.4679166625312,14.6612694769419,4.59822699375465,4.43315960671905,2.99951365496704,3.30382590389968,15.5782264981016,13.2675174817402,16.3350657746724,17.5562563394199,16.3657892691412,13.0906468072523,13.9527486238272,8.86002465497752,6.22034853050465,5.05445516867349,3.99839526184301,5.07469727554544,8.96618207290544,5.94205028357652,4.37043971723574,7.68812440410005,5.25266253167884,6.55912071918102,6.98499100995342,4.95806383745537,5.8622884852024,6.862093842394,6.1374805079721,5.00485048606076,7.3132954969655,6.37924622864625,6.56813080501028,3.51106593656617,1.80143534980301,8.52490498186778,4.97101854085205,5.8631514995274,3.42117916775928,4.26140524053378,5.70616272067471,5.39934895105824,4.65067889500816,4.82892122519315,5.25444040652263,5.26591519723137,5.25335885053105,5.59374785866405,8.77199924551994,4.83010253640311,7.38135303182045,15.9820360908737,14.9211687949962,1.98251269790279,2.3800550999719,5.97207101498655,5.57368012465052,5.02583099156164,2.8235693447268,4.89231696458715,3.99473814836374,3.79623249235609,3.62337700392824,4.02136334080431,5.96869416123452,2.33956904542944,4.49409704327111,6.48414149624083,3.98282546508734,4.74169752382704,3.31320686568214,4.50830942692322,4.48032921259691,5.43066964069352,4.76923575254166,4.93244989569207,4.28069429140846,2.04098346193787,4.56569506510662,1.77871576252289,4.50481785433454,4.52085688760367,2.9232074610031,3.65148218499305,2.65294875727659,3.56476192493988,2.30156909960649,3.40483976227574,4.11842119782122,8.62609239164127,2.60498663367952,4.05648975048929,3.03094653536534,1.4351793081753,0.964887042726734,7.7596339869974,9.09558776498327,6.68156403412306,5.94107800213158,6.33663670378956,6.70025029767263,4.28478553594825,9.56154874503214,6.30540576424764,7.30833475840957,10.2051051940792,7.70157579163969,9.49767400262426,7.23245292907558,9.04747703635634,8.70249094109935,2.95058563811422,8.00216564283724,16.215609588767,14.0654023910644,4.75411341592359,4.79694761688309,8.20321370482267,5.0757036758563,7.53981892064796,8.12493913038677,8.24355094104858,8.49229592366497,10.5250782435473,9.9366991689846,8.30104333687699,11.5675673911851,5.53566332312248,6.94455854302295,11.8907480328111,7.58862565673663,2.65490276679926,5.34117399540959,4.53485335447127,5.09233715340925,5.90603785761546,6.7635732547664,4.13485269069154,6.5436071305951,6.41695281092498,5.05658812697306,5.27093042874994,2.06271086496374,9.19186935535228,7.20244376125241,8.66703181344455,9.85950361145325,8.15765074754458,9.63191615051181,8.06290200950393,13.700922710157,5.86679270159276,5.93129798418696,4.6310963591542,8.40919890001548,5.8127193610526,5.72972786817481,5.49112782414428,4.76008609260678,4.95517422270746,17.9862542950194,7.68918963590337,9.90656966223468,5.18544676635193,5.46268525313604,5.74115756428306,6.63456702298916,4.41943917984024,4.05859211738608,5.2515990045681,2.86401185404534,8.85740782027179,3.86306987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|phase1_expression=8.96833543786846,6.2815573375085,3.63999391511629,4.23449895829562,4.50806156951712,4.70061961353291,3.73780224952841,5.81054955487093,5.20918271961167,1.40438715793196,2.91070545983358,3.43020283679947,8.38883576662908,6.38168937658681,6.32908547449759,5.26435695213547,5.59649502502517,9.30613387806801,8.08975158273859,11.0341309467488,7.73893940374735,6.25532992565577,3.6567970479451,2.55987876469451,1.83527424853736,6.31655160526522,6.03066794622705,2.37018355954478,3.99049180858385,3.78045194639896,2.88249663851896,5.08024538767705,9.22597181376855,0,3.75507105676657,3.32469290716985,2.6542016314108,21.7636447983192,15.626706890476,21.4644735029257,22.9410280332096,30.7370468231301,23.3044969454954,6.42073771675444,5.17022349219524,4.40512205188036,8.60630478782843,7.19483016055474,11.2039953194581,7.19390626574849,6.29938897314131,10.062679505548,10.0669563634642,6.5282592781021,7.73015738027667,5.91696702882678,7.16333599846892,11.3447860301037,19.624696703381,9.52183762689659,12.6766280701236,7.45457970552091,10.6715375533337,21.5975932147536,21.7550599764734,35.524005747305,15.8788058574755,24.974189845901,17.4198548678242,16.7407363531296,19.1395714829758,20.2812198926701,13.0312439161452,13.5964787128599,13.0349840584801,13.7882817991503,12.1127469099328,22.0899094887375,18.4327839907492,16.2220133908138,16.5592634920361,13.022834263919,29.5933978941464,18.0084035210138,20.3221669543157,12.9636577608414,13.2405663143166,13.2343606535963,7.72407171998477,5.81901012822248,5.50742528533188,1.72084775396277,2.03991400112325,0.539703191637817,1.29955283489534,2.68816132258401,4.21333260395256,3.40860645156115,5.97507810586598,4.24007489412408,7.60554466794075,8.98285341900225,7.64415719119937,7.11066703153331,4.97929394325792,3.80039798212648,6.57181778519218,3.53970027129086,2.84831672011889,7.42210695324124,6.41895709034703,6.69824052286711,5.5347719341454,6.33035090321015,5.40908052824242,7.53999547978053,4.94389935468748,2.60278842455841,8.84610551949874,6.63244084784378,8.39197770149496,3.87900202508178,7.45567044872489,13.4679166625312,14.6612694769419,4.59822699375465,4.43315960671905,2.99951365496704,3.30382590389968,15.5782264981016,13.2675174817402,16.3350657746724,17.5562563394199,16.3657892691412,13.0906468072523,13.9527486238272,8.86002465497752,6.22034853050465,5.05445516867349,3.99839526184301,5.07469727554544,8.96618207290544,5.94205028357652,4.37043971723574,7.68812440410005,5.25266253167884,6.55912071918102,6.98499100995342,4.95806383745537,5.8622884852024,6.862093842394,6.1374805079721,5.00485048606076,7.3132954969655,6.37924622864625,6.56813080501028,3.51106593656617,1.80143534980301,8.52490498186778,4.97101854085205,5.8631514995274,3.42117916775928,4.26140524053378,5.70616272067471,5.39934895105824,4.65067889500816,4.82892122519315,5.25444040652263,5.26591519723137,5.25335885053105,5.59374785866405,8.77199924551994,4.83010253640311,7.38135303182045,15.9820360908737,14.9211687949962,1.98251269790279,2.3800550999719,5.97207101498655,5.57368012465052,5.02583099156164,2.8235693447268,4.89231696458715,3.99473814836374,3.79623249235609,3.62337700392824,4.02136334080431,5.96869416123452,2.33956904542944,4.49409704327111,6.48414149624083,3.98282546508734,4.74169752382704,3.31320686568214,4.50830942692322,4.48032921259691,5.43066964069352,4.76923575254166,4.93244989569207,4.28069429140846,2.04098346193787,4.56569506510662,1.77871576252289,4.50481785433454,4.52085688760367,2.9232074610031,3.65148218499305,2.65294875727659,3.56476192493988,2.30156909960649,3.40483976227574,4.11842119782122,8.62609239164127,2.60498663367952,4.05648975048929,3.03094653536534,1.4351793081753,0.964887042726734,7.7596339869974,9.09558776498327,6.68156403412306,5.94107800213158,6.33663670378956,6.70025029767263,4.28478553594825,9.56154874503214,6.30540576424764,7.30833475840957,10.2051051940792,7.70157579163969,9.49767400262426,7.23245292907558,9.04747703635634,8.70249094109935,2.95058563811422,8.00216564283724,16.215609588767,14.0654023910644,4.75411341592359,4.79694761688309,8.20321370482267,5.0757036758563,7.53981892064796,8.12493913038677,8.24355094104858,8.49229592366497,10.5250782435473,9.9366991689846,8.30104333687699,11.5675673911851,5.53566332312248,6.94455854302295,11.8907480328111,7.58862565673663,2.65490276679926,5.34117399540959,4.53485335447127,5.09233715340925,5.90603785761546,6.7635732547664,4.13485269069154,6.5436071305951,6.41695281092498,5.05658812697306,5.27093042874994,2.06271086496374,9.19186935535228,7.20244376125241,8.66703181344455,9.85950361145325,8.15765074754458,9.63191615051181,8.06290200950393,13.700922710157,5.86679270159276,5.93129798418696,4.6310963591542,8.40919890001548,5.8127193610526,5.72972786817481,5.49112782414428,4.76008609260678,4.95517422270746,17.9862542950194,7.68918963590337,9.90656966223468,5.18544676635193,5.46268525313604,5.74115756428306,6.63456702298916,4.41943917984024,4.05859211738608,5.2515990045681,2.86401185404534,8.85740782027179,3.86306987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| ||
|short_description=p2@Tbc1d10b | |short_description=p2@Tbc1d10b | ||
}} | }} |
Latest revision as of 22:23, 25 September 2015
Short description: | p2@Tbc1d10b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tbc1d10b_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | -104bp_to_ENSMUST00000035643, ENSMUST00000120705, NM_144522, uc009juo.2_5end |
EntrezGene: | Tbc1d10b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.35e-15 | 44 |
neurectodermal cell | 1.35e-15 | 44 |
neural cell | 1.67e-15 | 43 |
neuron | 7.33e-14 | 33 |
neuronal stem cell | 7.33e-14 | 33 |
neuroblast | 7.33e-14 | 33 |
electrically signaling cell | 7.33e-14 | 33 |
CNS neuron (sensu Vertebrata) | 5.01e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.01e-13 | 23 |
electrically responsive cell | 2.37e-12 | 39 |
electrically active cell | 2.37e-12 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.34e-31 | 73 |
nervous system | 4.11e-31 | 75 |
ectoderm-derived structure | 6.68e-26 | 95 |
ectoderm | 6.68e-26 | 95 |
presumptive ectoderm | 6.68e-26 | 95 |
regional part of nervous system | 1.86e-25 | 54 |
neural tube | 3.02e-24 | 52 |
neural rod | 3.02e-24 | 52 |
future spinal cord | 3.02e-24 | 52 |
neural keel | 3.02e-24 | 52 |
brain | 2.17e-21 | 47 |
future brain | 2.17e-21 | 47 |
regional part of brain | 5.70e-21 | 46 |
neurectoderm | 9.88e-21 | 64 |
neural plate | 9.88e-21 | 64 |
presumptive neural plate | 9.88e-21 | 64 |
ecto-epithelium | 4.62e-19 | 73 |
anterior neural tube | 1.24e-18 | 40 |
regional part of forebrain | 4.52e-18 | 39 |
forebrain | 4.52e-18 | 39 |
future forebrain | 4.52e-18 | 39 |
gray matter | 9.25e-18 | 34 |
structure with developmental contribution from neural crest | 6.74e-16 | 92 |
pre-chordal neural plate | 1.84e-15 | 49 |
brain grey matter | 2.39e-15 | 29 |
regional part of telencephalon | 2.39e-15 | 29 |
telencephalon | 2.39e-15 | 29 |
cerebral cortex | 8.18e-11 | 21 |
cerebral hemisphere | 8.18e-11 | 21 |
pallium | 8.18e-11 | 21 |
regional part of cerebral cortex | 1.78e-08 | 17 |