FFCP PHASE1:Mm9::chr8:106772399..106772469,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57813 | |EntrezGene=57813 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=247 | |MCL_coexpression_id=247 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BN51 | |UniProt=Q8BN51 | ||
|association_with_transcript=0bp_to_ENSMUST00000050211,NM_021028,NR_045642,uc009naa.2,uc009nab.2_5end | |association_with_transcript=0bp_to_ENSMUST00000050211,NM_021028,NR_045642,uc009naa.2,uc009nab.2_5end | ||
|cluster_id=chr8:106772399..106772469,- | |||
|description=CAGE_peak_1_at_Tk2_5end | |description=CAGE_peak_1_at_Tk2_5end | ||
|id=chr8:106772399..106772469,- | |id=chr8:106772399..106772469,- | ||
|ontology_enrichment_celltype=CL:0000723!3.33e-12!91;CL:0000048!3.33e-12!91;CL:0000117!1.42e-11!23;CL:0000337!1.42e-11!23;CL:0000393!3.23e-10!39;CL:0000211!3.23e-10!39;CL:0000055!4.05e-10!50;CL:0000034!4.72e-10!97;CL:0000540!8.84e-10!33;CL:0000047!8.84e-10!33;CL:0000031!8.84e-10!33;CL:0000404!8.84e-10!33;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0002319!2.45e-09!43 | |ontology_enrichment_celltype=CL:0000723!3.33e-12!91;CL:0000048!3.33e-12!91;CL:0000117!1.42e-11!23;CL:0000337!1.42e-11!23;CL:0000393!3.23e-10!39;CL:0000211!3.23e-10!39;CL:0000055!4.05e-10!50;CL:0000034!4.72e-10!97;CL:0000540!8.84e-10!33;CL:0000047!8.84e-10!33;CL:0000031!8.84e-10!33;CL:0000404!8.84e-10!33;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0002319!2.45e-09!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,3.33e-12,91;CL:0000048,3.33e-12,91;CL:0000117,1.42e-11,23;CL:0000337,1.42e-11,23;CL:0000393,3.23e-10,39;CL:0000211,3.23e-10,39;CL:0000034,4.72e-10,97;CL:0000540,8.84e-10,33;CL:0000047,8.84e-10,33;CL:0000031,8.84e-10,33;CL:0000404,8.84e-10,33;CL:0000221,1.84e-09,44;CL:0000133,1.84e-09,44;CL:0002319,2.45e-09,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.53e-18!73;UBERON:0005743!2.53e-18!73;UBERON:0004121!4.39e-18!102;UBERON:0000924!4.39e-18!102;UBERON:0006601!4.39e-18!102;UBERON:0002346!4.17e-17!71;UBERON:0003075!4.17e-17!71;UBERON:0007284!4.17e-17!71;UBERON:0000073!7.48e-17!75;UBERON:0001016!7.48e-17!75;UBERON:0001049!4.95e-15!52;UBERON:0005068!4.95e-15!52;UBERON:0006241!4.95e-15!52;UBERON:0007135!4.95e-15!52;UBERON:0002020!1.14e-14!34;UBERON:0000955!4.71e-14!50;UBERON:0006238!4.71e-14!50;UBERON:0002616!7.75e-14!49;UBERON:0000033!9.68e-14!63;UBERON:0002791!3.03e-12!29;UBERON:0003528!3.03e-12!29;UBERON:0001893!3.03e-12!29;UBERON:0007811!1.84e-11!86;UBERON:0000475!1.90e-11!200;UBERON:0003080!2.12e-11!40;UBERON:0003056!4.62e-11!49;UBERON:0002780!5.62e-11!39;UBERON:0001890!5.62e-11!39;UBERON:0006240!5.62e-11!39;UBERON:0000153!3.80e-09!94;UBERON:0000956!1.02e-08!21;UBERON:0001869!1.02e-08!21;UBERON:0000203!1.02e-08!21;UBERON:0002619!1.63e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!2.53e-18!73;UBERON:0005743!2.53e-18!73;UBERON:0004121!4.39e-18!102;UBERON:0000924!4.39e-18!102;UBERON:0006601!4.39e-18!102;UBERON:0002346!4.17e-17!71;UBERON:0003075!4.17e-17!71;UBERON:0007284!4.17e-17!71;UBERON:0000073!7.48e-17!75;UBERON:0001016!7.48e-17!75;UBERON:0001049!4.95e-15!52;UBERON:0005068!4.95e-15!52;UBERON:0006241!4.95e-15!52;UBERON:0007135!4.95e-15!52;UBERON:0002020!1.14e-14!34;UBERON:0000955!4.71e-14!50;UBERON:0006238!4.71e-14!50;UBERON:0002616!7.75e-14!49;UBERON:0000033!9.68e-14!63;UBERON:0002791!3.03e-12!29;UBERON:0003528!3.03e-12!29;UBERON:0001893!3.03e-12!29;UBERON:0007811!1.84e-11!86;UBERON:0000475!1.90e-11!200;UBERON:0003080!2.12e-11!40;UBERON:0003056!4.62e-11!49;UBERON:0002780!5.62e-11!39;UBERON:0001890!5.62e-11!39;UBERON:0006240!5.62e-11!39;UBERON:0000153!3.80e-09!94;UBERON:0000956!1.02e-08!21;UBERON:0001869!1.02e-08!21;UBERON:0000203!1.02e-08!21;UBERON:0002619!1.63e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.53e-18,73;UBERON:0001016,7.48e-17,75;UBERON:0000073,2.85e-16,54;UBERON:0004121,3.33e-15,95;UBERON:0000924,3.33e-15,95;UBERON:0006601,3.33e-15,95;UBERON:0001049,4.95e-15,52;UBERON:0005068,4.95e-15,52;UBERON:0006241,4.95e-15,52;UBERON:0007135,4.95e-15,52;UBERON:0002020,1.14e-14,34;UBERON:0002346,2.88e-14,64;UBERON:0003075,2.88e-14,64;UBERON:0007284,2.88e-14,64;UBERON:0000955,1.95e-12,47;UBERON:0006238,1.95e-12,47;UBERON:0010371,2.12e-12,73;UBERON:0003528,3.03e-12,29;UBERON:0002791,3.03e-12,29;UBERON:0001893,3.03e-12,29;UBERON:0002616,3.18e-12,46;UBERON:0003080,2.12e-11,40;UBERON:0003056,4.62e-11,49;UBERON:0002780,5.62e-11,39;UBERON:0001890,5.62e-11,39;UBERON:0006240,5.62e-11,39;UBERON:0010314,8.21e-09,92;UBERON:0000956,1.02e-08,21;UBERON:0001869,1.02e-08,21;UBERON:0000203,1.02e-08,21;UBERON:0002619,1.63e-07,17 | |||
|phase1_expression=21.9403920533568,3.14077866875425,6.82498859084304,6.35174843744343,6.01074875935617,6.37941233265181,7.94282978024787,89.6115864684539,51.52867230751,62.9633575806162,16.4369249496485,13.7208113471979,74.3011167901433,77.1922153359747,33.6440859433819,27.3341610976265,18.88817070946,81.3892386624253,87.0676653396441,87.4242682703942,21.3458658279185,14.0993150705257,8.8807928307238,10.5594999043648,11.9292826154928,4.59385571292016,6.46142994238612,6.46413698057667,7.03086651988583,6.80481350351813,6.87364583031445,20.9560122241678,20.2971379902908,15.8481681015439,6.93243887403059,6.64938581433969,9.59595974433135,91.2398955006459,66.413504284523,63.8698967648034,175.292983433242,129.095596657146,82.5367600152961,36.8877676668441,33.8598950273179,23.1268907723719,24.2541316747892,22.6746162635664,26.3623419281366,37.1361107231881,20.1580447140522,21.5628846547457,52.851520908187,55.1275227928622,30.9206295211067,16.2073444702647,24.3553423947943,27.3306208907044,46.5327859977075,75.6457100359007,63.3831403506179,25.4133399051849,27.5681386794453,77.841325544841,101.853235344398,92.362414942993,44.6404164672423,31.890119341689,29.5515395079161,44.5519596494579,39.3307677727084,55.4162909743379,61.6223229255002,38.0946385558507,33.3542239143463,73.5375029288017,80.3845931295537,56.5654907717382,54.8375323724789,49.8530167620133,38.2418350258072,50.007683573449,51.6488548152555,69.2198010338966,54.5489744563212,58.3364599237862,42.9962476013291,43.2446714314697,11.1317504199781,11.0334477755907,42.320215350445,30.1148356943485,32.638624017972,34.5410042648203,37.6870322119648,41.2184736129549,22.611551641212,13.1231348385104,9.35229616570328,14.8402621294343,25.3518155598025,25.6652954828636,28.028576367731,63.9960032837998,9.30911476348221,14.4415123320806,12.6381111253696,19.2970756725211,39.0996204307229,74.517953810542,21.5121805190008,48.7144765299426,45.6618684566996,45.0660695252341,47.2706602685533,48.7586374359141,23.9779118702343,22.991297750266,28.307537662396,11.4854463462661,15.9005893291483,15.5160081003271,20.5030937339934,23.1296829639122,23.8769245767339,9.45191104271788,7.6681679683789,5.99902730993408,7.37007317023775,46.2853075760902,44.8350590762254,39.0785035071008,41.7178368461464,34.2658712822643,34.2850273523274,37.1532492425165,17.2108524907035,25.1302080632388,39.6774730740869,34.9333480771547,14.9638509407109,20.2313851901456,20.8872070574205,17.9338733224501,21.5675702309709,20.1138540847214,24.8309570083281,29.2334808935088,10.5628316537093,10.2117283290622,13.0203831881322,16.2204841996405,11.6779844674751,12.537077994798,13.7874031393322,17.3159812132089,7.72434506044558,6.94839349209731,10.5140494776369,10.9776659443816,11.0227248191115,11.1638478105829,8.28606574548236,10.0349758191176,10.4901636763417,7.67362017676346,10.1943892531855,12.1435956061856,9.2153515951549,11.3275550214576,12.3224590509701,11.8421989814519,11.8557062257167,15.9705638324842,29.6508827475419,36.531137394646,10.2429822724977,6.08236303326152,13.650448034255,10.9151235774406,10.4382643670896,11.6976444281539,12.2307924114679,14.0766963323294,9.49058123089023,15.481701744057,18.8501406600202,16.5133871794155,13.8424501854575,6.29173586057955,9.51007419448655,10.9527700289902,18.3977863924489,12.224590849241,9.01661885384643,11.4044743593376,12.2190066915604,15.9208311151023,16.2517900409341,14.9086249459398,15.5428740562961,24.1858441286729,27.5700943191048,9.00963570866908,7.46924181430171,5.8464149220062,7.50582449137461,7.95884627182976,12.2220408855082,12.083237772934,17.0241988113787,15.9245619649087,28.7536413054709,25.3055844414582,25.587089195394,24.5001511608698,22.7834715172828,26.5343936749852,33.9945869906553,13.0749074121634,8.31121379854332,11.2031756611624,13.1426539041561,15.5780819420889,15.9489239393629,18.3425628986331,14.9753386900881,14.8381342064679,17.5400245523236,24.2517705779292,24.5212674249572,31.9674419465141,84.4431190059925,64.7247763744264,17.7035138286853,19.8674457339407,40.137647496948,36.8044695899518,14.4262751931474,15.9056684138755,16.4064274096453,18.7410597262386,20.8960695800815,16.7278158566786,17.8238939265915,24.3445816478396,21.8597778904443,21.9191893433484,24.1125544547379,30.5255250600717,30.9429385754026,22.9704628730759,22.8041743095006,31.6742636107268,22.5666735177937,14.8096188054539,11.1859716076958,13.9567759019365,19.489924930131,18.1386737286917,23.5169746783081,18.5402202033528,18.8943610543902,26.5470876666085,22.1379078007497,18.5643977846736,36.0865982099015,19.8067203434441,21.2148241403717,10.2881776815164,21.4581682707151,20.334045206636,13.8221177305782,23.7482660309387,15.9576761483323,29.444657850071,35.9461288829588,21.2703266294509,18.729873496725,10.7357006372117,11.8178620563105,13.459553779095,12.2421951384537,45.8000495965959,34.5159179211662,19.1939787205797,18.8898417917106,19.7786879854926,21.597687979922,30.656275209674,12.918360679533,16.6542228265153,12.9907975376158,27.6854479224383,14.8677916983134,10.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| |phase1_expression=21.9403920533568,3.14077866875425,6.82498859084304,6.35174843744343,6.01074875935617,6.37941233265181,7.94282978024787,89.6115864684539,51.52867230751,62.9633575806162,16.4369249496485,13.7208113471979,74.3011167901433,77.1922153359747,33.6440859433819,27.3341610976265,18.88817070946,81.3892386624253,87.0676653396441,87.4242682703942,21.3458658279185,14.0993150705257,8.8807928307238,10.5594999043648,11.9292826154928,4.59385571292016,6.46142994238612,6.46413698057667,7.03086651988583,6.80481350351813,6.87364583031445,20.9560122241678,20.2971379902908,15.8481681015439,6.93243887403059,6.64938581433969,9.59595974433135,91.2398955006459,66.413504284523,63.8698967648034,175.292983433242,129.095596657146,82.5367600152961,36.8877676668441,33.8598950273179,23.1268907723719,24.2541316747892,22.6746162635664,26.3623419281366,37.1361107231881,20.1580447140522,21.5628846547457,52.851520908187,55.1275227928622,30.9206295211067,16.2073444702647,24.3553423947943,27.3306208907044,46.5327859977075,75.6457100359007,63.3831403506179,25.4133399051849,27.5681386794453,77.841325544841,101.853235344398,92.362414942993,44.6404164672423,31.890119341689,29.5515395079161,44.5519596494579,39.3307677727084,55.4162909743379,61.6223229255002,38.0946385558507,33.3542239143463,73.5375029288017,80.3845931295537,56.5654907717382,54.8375323724789,49.8530167620133,38.2418350258072,50.007683573449,51.6488548152555,69.2198010338966,54.5489744563212,58.3364599237862,42.9962476013291,43.2446714314697,11.1317504199781,11.0334477755907,42.320215350445,30.1148356943485,32.638624017972,34.5410042648203,37.6870322119648,41.2184736129549,22.611551641212,13.1231348385104,9.35229616570328,14.8402621294343,25.3518155598025,25.6652954828636,28.028576367731,63.9960032837998,9.30911476348221,14.4415123320806,12.6381111253696,19.2970756725211,39.0996204307229,74.517953810542,21.5121805190008,48.7144765299426,45.6618684566996,45.0660695252341,47.2706602685533,48.7586374359141,23.9779118702343,22.991297750266,28.307537662396,11.4854463462661,15.9005893291483,15.5160081003271,20.5030937339934,23.1296829639122,23.8769245767339,9.45191104271788,7.6681679683789,5.99902730993408,7.37007317023775,46.2853075760902,44.8350590762254,39.0785035071008,41.7178368461464,34.2658712822643,34.2850273523274,37.1532492425165,17.2108524907035,25.1302080632388,39.6774730740869,34.9333480771547,14.9638509407109,20.2313851901456,20.8872070574205,17.9338733224501,21.5675702309709,20.1138540847214,24.8309570083281,29.2334808935088,10.5628316537093,10.2117283290622,13.0203831881322,16.2204841996405,11.6779844674751,12.537077994798,13.7874031393322,17.3159812132089,7.72434506044558,6.94839349209731,10.5140494776369,10.9776659443816,11.0227248191115,11.1638478105829,8.28606574548236,10.0349758191176,10.4901636763417,7.67362017676346,10.1943892531855,12.1435956061856,9.2153515951549,11.3275550214576,12.3224590509701,11.8421989814519,11.8557062257167,15.9705638324842,29.6508827475419,36.531137394646,10.2429822724977,6.08236303326152,13.650448034255,10.9151235774406,10.4382643670896,11.6976444281539,12.2307924114679,14.0766963323294,9.49058123089023,15.481701744057,18.8501406600202,16.5133871794155,13.8424501854575,6.29173586057955,9.51007419448655,10.9527700289902,18.3977863924489,12.224590849241,9.01661885384643,11.4044743593376,12.2190066915604,15.9208311151023,16.2517900409341,14.9086249459398,15.5428740562961,24.1858441286729,27.5700943191048,9.00963570866908,7.46924181430171,5.8464149220062,7.50582449137461,7.95884627182976,12.2220408855082,12.083237772934,17.0241988113787,15.9245619649087,28.7536413054709,25.3055844414582,25.587089195394,24.5001511608698,22.7834715172828,26.5343936749852,33.9945869906553,13.0749074121634,8.31121379854332,11.2031756611624,13.1426539041561,15.5780819420889,15.9489239393629,18.3425628986331,14.9753386900881,14.8381342064679,17.5400245523236,24.2517705779292,24.5212674249572,31.9674419465141,84.4431190059925,64.7247763744264,17.7035138286853,19.8674457339407,40.137647496948,36.8044695899518,14.4262751931474,15.9056684138755,16.4064274096453,18.7410597262386,20.8960695800815,16.7278158566786,17.8238939265915,24.3445816478396,21.8597778904443,21.9191893433484,24.1125544547379,30.5255250600717,30.9429385754026,22.9704628730759,22.8041743095006,31.6742636107268,22.5666735177937,14.8096188054539,11.1859716076958,13.9567759019365,19.489924930131,18.1386737286917,23.5169746783081,18.5402202033528,18.8943610543902,26.5470876666085,22.1379078007497,18.5643977846736,36.0865982099015,19.8067203434441,21.2148241403717,10.2881776815164,21.4581682707151,20.334045206636,13.8221177305782,23.7482660309387,15.9576761483323,29.444657850071,35.9461288829588,21.2703266294509,18.729873496725,10.7357006372117,11.8178620563105,13.459553779095,12.2421951384537,45.8000495965959,34.5159179211662,19.1939787205797,18.8898417917106,19.7786879854926,21.597687979922,30.656275209674,12.918360679533,16.6542228265153,12.9907975376158,27.6854479224383,14.8677916983134,10.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| ||
|short_description=p1@Tk2 | |short_description=p1@Tk2 | ||
}} | }} |
Latest revision as of 06:36, 27 September 2015
Short description: | p1@Tk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | 0bp_to_ENSMUST00000050211, NM_021028, NR_045642, uc009naa.2, uc009nab.2_5end |
EntrezGene: | Tk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 3.33e-12 | 91 |
multi fate stem cell | 3.33e-12 | 91 |
CNS neuron (sensu Vertebrata) | 1.42e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.42e-11 | 23 |
electrically responsive cell | 3.23e-10 | 39 |
electrically active cell | 3.23e-10 | 39 |
stem cell | 4.72e-10 | 97 |
neuron | 8.84e-10 | 33 |
neuronal stem cell | 8.84e-10 | 33 |
neuroblast | 8.84e-10 | 33 |
electrically signaling cell | 8.84e-10 | 33 |
ectodermal cell | 1.84e-09 | 44 |
neurectodermal cell | 1.84e-09 | 44 |
neural cell | 2.45e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.53e-18 | 73 |
nervous system | 7.48e-17 | 75 |
regional part of nervous system | 2.85e-16 | 54 |
ectoderm-derived structure | 3.33e-15 | 95 |
ectoderm | 3.33e-15 | 95 |
presumptive ectoderm | 3.33e-15 | 95 |
neural tube | 4.95e-15 | 52 |
neural rod | 4.95e-15 | 52 |
future spinal cord | 4.95e-15 | 52 |
neural keel | 4.95e-15 | 52 |
gray matter | 1.14e-14 | 34 |
neurectoderm | 2.88e-14 | 64 |
neural plate | 2.88e-14 | 64 |
presumptive neural plate | 2.88e-14 | 64 |
brain | 1.95e-12 | 47 |
future brain | 1.95e-12 | 47 |
ecto-epithelium | 2.12e-12 | 73 |
brain grey matter | 3.03e-12 | 29 |
regional part of telencephalon | 3.03e-12 | 29 |
telencephalon | 3.03e-12 | 29 |
regional part of brain | 3.18e-12 | 46 |
anterior neural tube | 2.12e-11 | 40 |
pre-chordal neural plate | 4.62e-11 | 49 |
regional part of forebrain | 5.62e-11 | 39 |
forebrain | 5.62e-11 | 39 |
future forebrain | 5.62e-11 | 39 |
structure with developmental contribution from neural crest | 8.21e-09 | 92 |
cerebral cortex | 1.02e-08 | 21 |
cerebral hemisphere | 1.02e-08 | 21 |
pallium | 1.02e-08 | 21 |
regional part of cerebral cortex | 1.63e-07 | 17 |