FFCP PHASE1:Hg19::chr2:169926089..169926100,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:169926089..169926100,+
|short_description=p5@DHRS9
|description=CAGE_peak_5_at_DHRS9_5end
|association_with_transcript=3bp_to_ENST00000421653_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10170 | |EntrezGene=10170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16888 | |HGNC=16888 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000421653_5end | |||
|cluster_id=chr2:169926089..169926100,+ | |||
|coexpression_cluster_id=C2667 | |||
|description=CAGE_peak_5_at_DHRS9_5end | |||
|id=chr2:169926089..169926100,+ | |||
|ontology_enrichment_celltype=CL:0000557!4.42e-54!71;CL:0002009!6.38e-54!65;CL:0002194!3.30e-51!63;CL:0000576!3.30e-51!63;CL:0000040!3.30e-51!63;CL:0000559!3.30e-51!63;CL:0000766!9.54e-51!76;CL:0000839!2.14e-50!70;CL:0000763!4.14e-41!112;CL:0000049!4.14e-41!112;CL:0002057!2.90e-40!42;CL:0000860!1.10e-36!45;CL:0002031!6.78e-24!124;CL:0000738!6.54e-23!140;CL:0002032!6.16e-22!165;CL:0000837!6.16e-22!165;CL:0000037!3.24e-20!172;CL:0000566!3.24e-20!172;CL:0002087!5.67e-20!119;CL:0000988!5.25e-18!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.84e-68;33!CL:0002057;1.84e-68;33!CL:0000473;4.34e-61;39!CL:0000234;4.34e-61;39!CL:0000576;1.68e-47;48!CL:0000766;1.10e-29;69!CL:0000763;5.85e-17;100!CL:0002087;5.79e-11;104!CL:0002619;2.09e-10;3!CL:0000738;7.08e-10;136!CL:0000235;6.31e-08;6!CL:0001014;4.57e-07;2!CL:0001016;4.57e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.39e-80,61;CL:0000557,2.62e-76,67;CL:0002194,2.35e-75,59;CL:0000576,2.35e-75,59;CL:0000040,2.35e-75,59;CL:0000559,2.35e-75,59;CL:0000839,4.92e-70,66;CL:0000473,5.18e-64,48;CL:0000234,5.18e-64,48;CL:0000766,2.23e-63,72;CL:0000860,2.83e-57,42;CL:0002057,2.83e-57,42;CL:0000763,8.77e-46,108;CL:0000049,8.77e-46,108;CL:0002031,6.12e-38,120;CL:0002087,8.26e-34,115;CL:0000738,3.35e-32,136;CL:0002032,4.39e-27,161;CL:0000837,4.39e-27,161;CL:0000037,1.70e-25,168;CL:0000988,1.22e-23,177;CL:0002619,2.30e-10,3;CL:0000235,6.03e-08,6;CL:0000134,1.17e-07,354;CL:0002320,2.62e-07,361;CL:0001014,3.86e-07,2;CL:0001016,3.86e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.34e-44;42!CL:0000049;2.28e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.03e-46!80;UBERON:0001474!2.77e-41!86;UBERON:0002390!2.88e-39!102;UBERON:0003061!2.88e-39!102;UBERON:0002193!1.28e-36!112;UBERON:0004765!2.44e-32!101;UBERON:0001434!2.44e-32!101;UBERON:0002405!1.63e-29!115;UBERON:0002204!2.07e-15!167;UBERON:0003081!3.80e-15!216;UBERON:0000926!3.89e-07!448;UBERON:0004120!3.89e-07!448;UBERON:0006603!3.89e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.59e-66,76;UBERON:0001474,1.80e-60,82;UBERON:0002390,1.25e-56,98;UBERON:0003061,1.25e-56,98;UBERON:0004765,3.68e-54,90;UBERON:0002405,4.52e-52,93;UBERON:0002193,2.37e-50,108;UBERON:0001434,1.11e-47,100;UBERON:0002204,1.46e-25,167;UBERON:0003081,1.20e-22,203;UBERON:0000926,5.28e-12,315;UBERON:0004120,5.28e-12,315;UBERON:0006603,5.28e-12,315;UBERON:0002050,7.04e-07,564;UBERON:0002384,7.79e-07,371 | |||
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| ||
|short_description=p5@DHRS9 | |||
}} | }} |
Latest revision as of 01:52, 18 September 2015
Short description: | p5@DHRS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DHRS9_5end |
Coexpression cluster: | C2667_CD14_acute_Macrophage_immature_Monocytederived_Mast_trachea |
Association with transcript: | 3bp_to_ENST00000421653_5end |
EntrezGene: | DHRS9 |
HGNC: | 16888 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.39e-80 | 61 |
granulocyte monocyte progenitor cell | 2.62e-76 | 67 |
monopoietic cell | 2.35e-75 | 59 |
monocyte | 2.35e-75 | 59 |
monoblast | 2.35e-75 | 59 |
promonocyte | 2.35e-75 | 59 |
myeloid lineage restricted progenitor cell | 4.92e-70 | 66 |
defensive cell | 5.18e-64 | 48 |
phagocyte | 5.18e-64 | 48 |
myeloid leukocyte | 2.23e-63 | 72 |
classical monocyte | 2.83e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-57 | 42 |
myeloid cell | 8.77e-46 | 108 |
common myeloid progenitor | 8.77e-46 | 108 |
hematopoietic lineage restricted progenitor cell | 6.12e-38 | 120 |
nongranular leukocyte | 8.26e-34 | 115 |
leukocyte | 3.35e-32 | 136 |
hematopoietic oligopotent progenitor cell | 4.39e-27 | 161 |
hematopoietic multipotent progenitor cell | 4.39e-27 | 161 |
hematopoietic stem cell | 1.70e-25 | 168 |
hematopoietic cell | 1.22e-23 | 177 |
adult endothelial progenitor cell | 2.30e-10 | 3 |
macrophage | 6.03e-08 | 6 |
mesenchymal cell | 1.17e-07 | 354 |
connective tissue cell | 2.62e-07 | 361 |
CD1a-positive Langerhans cell | 3.86e-07 | 2 |
immature CD1a-positive Langerhans cell | 3.86e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.59e-66 | 76 |
bone element | 1.80e-60 | 82 |
hematopoietic system | 1.25e-56 | 98 |
blood island | 1.25e-56 | 98 |
skeletal element | 3.68e-54 | 90 |
immune system | 4.52e-52 | 93 |
hemolymphoid system | 2.37e-50 | 108 |
skeletal system | 1.11e-47 | 100 |
musculoskeletal system | 1.46e-25 | 167 |
lateral plate mesoderm | 1.20e-22 | 203 |
mesoderm | 5.28e-12 | 315 |
mesoderm-derived structure | 5.28e-12 | 315 |
presumptive mesoderm | 5.28e-12 | 315 |
embryonic structure | 7.04e-07 | 564 |
connective tissue | 7.79e-07 | 371 |