FFCP PHASE1:Mm9::chr16:32419782..32419839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66061 | |EntrezGene=66061 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQ66,Q9CQJ9 | |UniProt=Q9CQ66,Q9CQJ9 | ||
|association_with_transcript=0bp_to_ENSMUST00000014220,ENSMUST00000080316,NM_025329,uc007yyt.1,uc007yyu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000014220,ENSMUST00000080316,NM_025329,uc007yyt.1,uc007yyu.1_5end | ||
|cluster_id=chr16:32419782..32419839,+ | |||
|description=CAGE_peak_2_at_Tctex1d2_5end | |description=CAGE_peak_2_at_Tctex1d2_5end | ||
|id=chr16:32419782..32419839,+ | |id=chr16:32419782..32419839,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.23e-13!44;CL:0000133!1.23e-13!44;CL:0002319!2.86e-13!43;CL:0000117!5.99e-12!23;CL:0000337!5.99e-12!23;CL:0000055!2.65e-11!50;CL:0000540!6.56e-11!33;CL:0000047!6.56e-11!33;CL:0000031!6.56e-11!33;CL:0000404!6.56e-11!33;CL:0000393!4.17e-09!39;CL:0000211!4.17e-09!39 | |ontology_enrichment_celltype=CL:0000221!1.23e-13!44;CL:0000133!1.23e-13!44;CL:0002319!2.86e-13!43;CL:0000117!5.99e-12!23;CL:0000337!5.99e-12!23;CL:0000055!2.65e-11!50;CL:0000540!6.56e-11!33;CL:0000047!6.56e-11!33;CL:0000031!6.56e-11!33;CL:0000404!6.56e-11!33;CL:0000393!4.17e-09!39;CL:0000211!4.17e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.22e-13,44;CL:0000133,1.22e-13,44;CL:0002319,2.84e-13,43;CL:0000117,5.96e-12,23;CL:0000337,5.96e-12,23;CL:0000540,6.53e-11,33;CL:0000047,6.53e-11,33;CL:0000031,6.53e-11,33;CL:0000404,6.53e-11,33;CL:0000393,4.15e-09,39;CL:0000211,4.15e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.49e-25!75;UBERON:0001016!5.49e-25!75;UBERON:0001017!1.93e-24!73;UBERON:0005743!1.93e-24!73;UBERON:0000033!9.17e-20!63;UBERON:0001049!1.61e-19!52;UBERON:0005068!1.61e-19!52;UBERON:0006241!1.61e-19!52;UBERON:0007135!1.61e-19!52;UBERON:0004121!4.11e-19!102;UBERON:0000924!4.11e-19!102;UBERON:0006601!4.11e-19!102;UBERON:0002020!1.95e-18!34;UBERON:0000955!3.36e-18!50;UBERON:0006238!3.36e-18!50;UBERON:0002346!4.56e-18!71;UBERON:0003075!4.56e-18!71;UBERON:0007284!4.56e-18!71;UBERON:0002616!1.10e-17!49;UBERON:0003056!2.24e-16!49;UBERON:0002791!2.14e-15!29;UBERON:0003528!2.14e-15!29;UBERON:0001893!2.14e-15!29;UBERON:0003080!1.27e-14!40;UBERON:0002780!3.87e-14!39;UBERON:0001890!3.87e-14!39;UBERON:0006240!3.87e-14!39;UBERON:0000956!2.49e-11!21;UBERON:0001869!2.49e-11!21;UBERON:0000203!2.49e-11!21;UBERON:0002619!7.68e-10!17;UBERON:0007811!1.64e-07!86;UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10;UBERON:0000025!6.91e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!5.49e-25!75;UBERON:0001016!5.49e-25!75;UBERON:0001017!1.93e-24!73;UBERON:0005743!1.93e-24!73;UBERON:0000033!9.17e-20!63;UBERON:0001049!1.61e-19!52;UBERON:0005068!1.61e-19!52;UBERON:0006241!1.61e-19!52;UBERON:0007135!1.61e-19!52;UBERON:0004121!4.11e-19!102;UBERON:0000924!4.11e-19!102;UBERON:0006601!4.11e-19!102;UBERON:0002020!1.95e-18!34;UBERON:0000955!3.36e-18!50;UBERON:0006238!3.36e-18!50;UBERON:0002346!4.56e-18!71;UBERON:0003075!4.56e-18!71;UBERON:0007284!4.56e-18!71;UBERON:0002616!1.10e-17!49;UBERON:0003056!2.24e-16!49;UBERON:0002791!2.14e-15!29;UBERON:0003528!2.14e-15!29;UBERON:0001893!2.14e-15!29;UBERON:0003080!1.27e-14!40;UBERON:0002780!3.87e-14!39;UBERON:0001890!3.87e-14!39;UBERON:0006240!3.87e-14!39;UBERON:0000956!2.49e-11!21;UBERON:0001869!2.49e-11!21;UBERON:0000203!2.49e-11!21;UBERON:0002619!7.68e-10!17;UBERON:0007811!1.64e-07!86;UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10;UBERON:0000025!6.91e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.42e-25,75;UBERON:0001017,1.90e-24,73;UBERON:0004121,3.44e-21,95;UBERON:0000924,3.44e-21,95;UBERON:0006601,3.44e-21,95;UBERON:0002346,6.04e-21,64;UBERON:0003075,6.04e-21,64;UBERON:0007284,6.04e-21,64;UBERON:0000073,9.13e-21,54;UBERON:0010314,1.31e-19,92;UBERON:0001049,1.59e-19,52;UBERON:0005068,1.59e-19,52;UBERON:0006241,1.59e-19,52;UBERON:0007135,1.59e-19,52;UBERON:0002020,1.93e-18,34;UBERON:0010371,2.48e-17,73;UBERON:0000955,1.50e-16,47;UBERON:0006238,1.50e-16,47;UBERON:0003056,2.22e-16,49;UBERON:0002616,4.82e-16,46;UBERON:0003528,2.12e-15,29;UBERON:0002791,2.12e-15,29;UBERON:0001893,2.12e-15,29;UBERON:0003080,1.26e-14,40;UBERON:0002780,3.84e-14,39;UBERON:0001890,3.84e-14,39;UBERON:0006240,3.84e-14,39;UBERON:0000956,2.47e-11,21;UBERON:0001869,2.47e-11,21;UBERON:0000203,2.47e-11,21;UBERON:0002619,7.64e-10,17;UBERON:0002021,3.85e-07,10;UBERON:0000411,3.85e-07,10;UBERON:0001950,3.85e-07,10;UBERON:0000025,7.25e-07,114 | |||
|phase1_expression=11.0502704502308,2.44282785347553,0,1.51232105653415,1.00179145989269,1.00727563147134,1.40167584357315,0.516493293766305,0.140788722151667,0,0.171217968225505,0.8774937489487,0,0.262261207256992,4.33042690360362,3.03712901084739,1.39912375625629,1.26184866143295,3.01651753932625,2.97072756258621,44.5626840391606,5.06383851124515,6.52999472847338,3.03985603307473,4.5881856213434,1.72269589234506,1.7230479846363,0.646413698057667,1.33016393619462,0.756090389279792,1.33038306393183,0,1.23012957516914,0,3.17736781726402,3.32469290716985,2.04169356262369,11.7188856606334,10.1573594788094,11.5175223674236,10.5881667845583,10.2456822743767,15.5363312969969,3.65100772129174,4.46058497365864,4.03802854755699,1.56478268869608,12.4274339136855,8.34807494390993,6.9994763666742,8.81914456239784,21.5628846547457,2.68452169692378,0.725362142011344,0,3.08711323243136,2.29226751951005,2.57836046138721,10.5204559646991,9.52183762689659,5.07065122804943,3.38844532069132,5.33576877666684,2.2497492932035,1.97773272513395,0,7.19040265244171,6.53171119046643,8.50254820929517,8.50537411489651,7.78202357000113,11.9973413449598,13.2521124570968,13.229006315215,8.91362880469598,7.35375029288017,13.2139057199266,11.8749224419225,11.2132769277058,11.6059933202571,11.8019060247108,6.25096044668112,18.9844439320939,17.4456409109821,13.4462458043593,13.258286346315,14.3795397607094,13.2343606535963,7.64834552665159,4.76100828672749,4.63783181922684,3.44169550792555,3.39985666853875,4.31762553310254,0.649776417447669,2.24013443548668,11.5164424508037,3.40860645156115,5.97507810586598,2.82671659608272,7.88723150749411,2.56652954828636,7.64415719119937,0,1.5154372870785,2.78695852022608,4.04419556011827,8.67797485864856,2.84831672011889,3.56261133755579,3.81667718885499,2.13125834818499,2.99800146432876,3.3158980921577,2.70454026412121,2.89033160058254,0.988779870937496,4.19338135067744,4.42305275974937,1.7794353494215,2.65009822152472,3.39412677194655,5.59175283654366,9.9545470983926,7.74952815209784,1.53274233125155,3.23500836165985,3.59941638596045,4.70159840170339,11.0845073159569,11.4375150704657,9.04711335212624,11.298580812498,14.5757810678288,12.0517065844545,11.0324058886075,1.83310854930569,3.4833951770826,2.77995034277042,6.73413938836717,4.29397461776922,6.43725892413724,4.14142898552303,7.38453607395004,3.87808045162569,5.89323113310309,6.46541899462129,11.9003550539947,3.23351989399263,3.21480336285293,4.92663147659057,3.06874025398605,3.05851974148158,1.74126083261083,3.2925141825271,3.18454826909589,9.83098462238529,5.40430604940902,5.11494298912067,4.76389276831654,3.75241695969754,3.24111710629827,2.84093682702252,4.13204886669548,7.0962871928194,9.53389173476672,6.9751084363901,4.90414437942112,6.41783414662574,4.76085645829376,5.02626619184305,4.82459958503597,6.58650345873152,5.50246316917524,13.6688466566683,9.05560588937703,2.97376904685418,3.70230793328962,3.19932375802851,4.18026009348789,4.12375876230699,4.03367049246685,3.11329261382818,3.80451252225118,0.949058123089023,3.45867804920423,3.77002813200404,2.78539060857611,2.9244613067868,2.69645822596266,2.16138049874694,1.1948476395262,5.12103332573321,4.56994050438915,6.76246414038483,4.68398054044223,5.04276466635827,3.22624771495465,6.19718063817721,5.75679577120448,6.75094529717912,5.42947521255922,0.296452627087149,2.33583148002532,2.75182593158484,0.899448449539415,1.21716072833102,1.68824011826692,1.52775511068852,1.43848068725405,0.486405680325106,2.19649130550465,0,2.23284568601102,2.18426371180192,2.52578877947112,1.79397413521912,1.92977408545347,4.80358294433172,4.54779388249163,3.09633455239849,3.22515662972857,4.92849521405854,3.51763140627813,4.52282917683426,2.34160377429359,2.83743259391144,1.99318220683897,2.23236676120482,2.13022309130459,3.45369963731791,2.89298117163023,4.52373851817817,6.52686820582452,0,0.827810238914197,13.1651483789989,10.5490517932983,6.88526770582037,5.04941854408746,5.67914794949262,2.73307121007647,3.87762115919038,3.82350076724083,6.01556420022464,3.67999490025482,5.66734982344852,3.79932615284705,3.16230222357219,11.2462460747632,3.12268187458191,2.13678724400706,3.4206261464251,4.94910368917606,1.32745138339963,3.15614827001476,2.72091201268276,3.20628635585027,2.06711325016541,2.45948118355142,2.06742634534577,2.54473610634254,3.20847640546249,2.52829406348653,1.05418608574999,2.06271086496374,4.08527526904546,5.04171063287669,2.97524972700335,3.85806663056866,5.14286677562593,3.56737635204141,3.78462747384878,2.13125464380219,1.64270195644597,1.48282449604674,2.20528398054962,3.13283880588812,1.61464426695906,3.01564624640779,3.58117032009409,2.46211349617592,2.04036585640896,10.0129663085675,2.73393409276564,2.68302928352189,2.22233432843654,2.44878994106098,1.6403307326523,1.60144721244566,5.09935289981566,5.03825228365169,2.9021994498929,4.77335309007557,3.47969592939249,3.65975040828328,4.10420295122845,4.39085421630384,3.49380101993884,2.83215127408124,1.32245529160537,3.66458318777641,3.88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| |phase1_expression=11.0502704502308,2.44282785347553,0,1.51232105653415,1.00179145989269,1.00727563147134,1.40167584357315,0.516493293766305,0.140788722151667,0,0.171217968225505,0.8774937489487,0,0.262261207256992,4.33042690360362,3.03712901084739,1.39912375625629,1.26184866143295,3.01651753932625,2.97072756258621,44.5626840391606,5.06383851124515,6.52999472847338,3.03985603307473,4.5881856213434,1.72269589234506,1.7230479846363,0.646413698057667,1.33016393619462,0.756090389279792,1.33038306393183,0,1.23012957516914,0,3.17736781726402,3.32469290716985,2.04169356262369,11.7188856606334,10.1573594788094,11.5175223674236,10.5881667845583,10.2456822743767,15.5363312969969,3.65100772129174,4.46058497365864,4.03802854755699,1.56478268869608,12.4274339136855,8.34807494390993,6.9994763666742,8.81914456239784,21.5628846547457,2.68452169692378,0.725362142011344,0,3.08711323243136,2.29226751951005,2.57836046138721,10.5204559646991,9.52183762689659,5.07065122804943,3.38844532069132,5.33576877666684,2.2497492932035,1.97773272513395,0,7.19040265244171,6.53171119046643,8.50254820929517,8.50537411489651,7.78202357000113,11.9973413449598,13.2521124570968,13.229006315215,8.91362880469598,7.35375029288017,13.2139057199266,11.8749224419225,11.2132769277058,11.6059933202571,11.8019060247108,6.25096044668112,18.9844439320939,17.4456409109821,13.4462458043593,13.258286346315,14.3795397607094,13.2343606535963,7.64834552665159,4.76100828672749,4.63783181922684,3.44169550792555,3.39985666853875,4.31762553310254,0.649776417447669,2.24013443548668,11.5164424508037,3.40860645156115,5.97507810586598,2.82671659608272,7.88723150749411,2.56652954828636,7.64415719119937,0,1.5154372870785,2.78695852022608,4.04419556011827,8.67797485864856,2.84831672011889,3.56261133755579,3.81667718885499,2.13125834818499,2.99800146432876,3.3158980921577,2.70454026412121,2.89033160058254,0.988779870937496,4.19338135067744,4.42305275974937,1.7794353494215,2.65009822152472,3.39412677194655,5.59175283654366,9.9545470983926,7.74952815209784,1.53274233125155,3.23500836165985,3.59941638596045,4.70159840170339,11.0845073159569,11.4375150704657,9.04711335212624,11.298580812498,14.5757810678288,12.0517065844545,11.0324058886075,1.83310854930569,3.4833951770826,2.77995034277042,6.73413938836717,4.29397461776922,6.43725892413724,4.14142898552303,7.38453607395004,3.87808045162569,5.89323113310309,6.46541899462129,11.9003550539947,3.23351989399263,3.21480336285293,4.92663147659057,3.06874025398605,3.05851974148158,1.74126083261083,3.2925141825271,3.18454826909589,9.83098462238529,5.40430604940902,5.11494298912067,4.76389276831654,3.75241695969754,3.24111710629827,2.84093682702252,4.13204886669548,7.0962871928194,9.53389173476672,6.9751084363901,4.90414437942112,6.41783414662574,4.76085645829376,5.02626619184305,4.82459958503597,6.58650345873152,5.50246316917524,13.6688466566683,9.05560588937703,2.97376904685418,3.70230793328962,3.19932375802851,4.18026009348789,4.12375876230699,4.03367049246685,3.11329261382818,3.80451252225118,0.949058123089023,3.45867804920423,3.77002813200404,2.78539060857611,2.9244613067868,2.69645822596266,2.16138049874694,1.1948476395262,5.12103332573321,4.56994050438915,6.76246414038483,4.68398054044223,5.04276466635827,3.22624771495465,6.19718063817721,5.75679577120448,6.75094529717912,5.42947521255922,0.296452627087149,2.33583148002532,2.75182593158484,0.899448449539415,1.21716072833102,1.68824011826692,1.52775511068852,1.43848068725405,0.486405680325106,2.19649130550465,0,2.23284568601102,2.18426371180192,2.52578877947112,1.79397413521912,1.92977408545347,4.80358294433172,4.54779388249163,3.09633455239849,3.22515662972857,4.92849521405854,3.51763140627813,4.52282917683426,2.34160377429359,2.83743259391144,1.99318220683897,2.23236676120482,2.13022309130459,3.45369963731791,2.89298117163023,4.52373851817817,6.52686820582452,0,0.827810238914197,13.1651483789989,10.5490517932983,6.88526770582037,5.04941854408746,5.67914794949262,2.73307121007647,3.87762115919038,3.82350076724083,6.01556420022464,3.67999490025482,5.66734982344852,3.79932615284705,3.16230222357219,11.2462460747632,3.12268187458191,2.13678724400706,3.4206261464251,4.94910368917606,1.32745138339963,3.15614827001476,2.72091201268276,3.20628635585027,2.06711325016541,2.45948118355142,2.06742634534577,2.54473610634254,3.20847640546249,2.52829406348653,1.05418608574999,2.06271086496374,4.08527526904546,5.04171063287669,2.97524972700335,3.85806663056866,5.14286677562593,3.56737635204141,3.78462747384878,2.13125464380219,1.64270195644597,1.48282449604674,2.20528398054962,3.13283880588812,1.61464426695906,3.01564624640779,3.58117032009409,2.46211349617592,2.04036585640896,10.0129663085675,2.73393409276564,2.68302928352189,2.22233432843654,2.44878994106098,1.6403307326523,1.60144721244566,5.09935289981566,5.03825228365169,2.9021994498929,4.77335309007557,3.47969592939249,3.65975040828328,4.10420295122845,4.39085421630384,3.49380101993884,2.83215127408124,1.32245529160537,3.66458318777641,3.88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| ||
|short_description=p2@Tctex1d2 | |short_description=p2@Tctex1d2 | ||
}} | }} |
Latest revision as of 21:27, 1 October 2015
Short description: | p2@Tctex1d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tctex1d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000014220, ENSMUST00000080316, NM_025329, uc007yyt.1, uc007yyu.1_5end |
EntrezGene: | Tctex1d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.22e-13 | 44 |
neurectodermal cell | 1.22e-13 | 44 |
neural cell | 2.84e-13 | 43 |
CNS neuron (sensu Vertebrata) | 5.96e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.96e-12 | 23 |
neuron | 6.53e-11 | 33 |
neuronal stem cell | 6.53e-11 | 33 |
neuroblast | 6.53e-11 | 33 |
electrically signaling cell | 6.53e-11 | 33 |
electrically responsive cell | 4.15e-09 | 39 |
electrically active cell | 4.15e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.42e-25 | 75 |
central nervous system | 1.90e-24 | 73 |
ectoderm-derived structure | 3.44e-21 | 95 |
ectoderm | 3.44e-21 | 95 |
presumptive ectoderm | 3.44e-21 | 95 |
neurectoderm | 6.04e-21 | 64 |
neural plate | 6.04e-21 | 64 |
presumptive neural plate | 6.04e-21 | 64 |
regional part of nervous system | 9.13e-21 | 54 |
structure with developmental contribution from neural crest | 1.31e-19 | 92 |
neural tube | 1.59e-19 | 52 |
neural rod | 1.59e-19 | 52 |
future spinal cord | 1.59e-19 | 52 |
neural keel | 1.59e-19 | 52 |
gray matter | 1.93e-18 | 34 |
ecto-epithelium | 2.48e-17 | 73 |
brain | 1.50e-16 | 47 |
future brain | 1.50e-16 | 47 |
pre-chordal neural plate | 2.22e-16 | 49 |
regional part of brain | 4.82e-16 | 46 |
brain grey matter | 2.12e-15 | 29 |
regional part of telencephalon | 2.12e-15 | 29 |
telencephalon | 2.12e-15 | 29 |
anterior neural tube | 1.26e-14 | 40 |
regional part of forebrain | 3.84e-14 | 39 |
forebrain | 3.84e-14 | 39 |
future forebrain | 3.84e-14 | 39 |
cerebral cortex | 2.47e-11 | 21 |
cerebral hemisphere | 2.47e-11 | 21 |
pallium | 2.47e-11 | 21 |
regional part of cerebral cortex | 7.64e-10 | 17 |
occipital lobe | 3.85e-07 | 10 |
visual cortex | 3.85e-07 | 10 |
neocortex | 3.85e-07 | 10 |
tube | 7.25e-07 | 114 |