FFCP PHASE1:Mm9::chr4:128798478..128798559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15444 | |EntrezGene=15444 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=235 | |MCL_coexpression_id=235 | ||
|TSSclassifier=NA | |||
|UniProt=P84075 | |UniProt=P84075 | ||
|association_with_transcript=0bp_to_ENSMUST00000030572,NM_010471,uc008uwd.2_5end | |association_with_transcript=0bp_to_ENSMUST00000030572,NM_010471,uc008uwd.2_5end | ||
|cluster_id=chr4:128798478..128798559,- | |||
|description=CAGE_peak_1_at_Hpca_5end | |description=CAGE_peak_1_at_Hpca_5end | ||
|id=chr4:128798478..128798559,- | |id=chr4:128798478..128798559,- | ||
|ontology_enrichment_celltype=CL:0000117!2.15e-13!23;CL:0000337!2.15e-13!23;CL:0000540!2.24e-13!33;CL:0000047!2.24e-13!33;CL:0000031!2.24e-13!33;CL:0000404!2.24e-13!33;CL:0000221!3.22e-10!44;CL:0000133!3.22e-10!44;CL:0002319!3.79e-10!43;CL:0000393!4.05e-09!39;CL:0000211!4.05e-09!39 | |ontology_enrichment_celltype=CL:0000117!2.15e-13!23;CL:0000337!2.15e-13!23;CL:0000540!2.24e-13!33;CL:0000047!2.24e-13!33;CL:0000031!2.24e-13!33;CL:0000404!2.24e-13!33;CL:0000221!3.22e-10!44;CL:0000133!3.22e-10!44;CL:0002319!3.79e-10!43;CL:0000393!4.05e-09!39;CL:0000211!4.05e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.18e-15,23;CL:0000337,1.18e-15,23;CL:0000540,5.15e-15,33;CL:0000047,5.15e-15,33;CL:0000031,5.15e-15,33;CL:0000404,5.15e-15,33;CL:0000393,9.54e-11,39;CL:0000211,9.54e-11,39;CL:0000221,5.42e-10,44;CL:0000133,5.42e-10,44;CL:0002319,6.74e-10,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.64e-28!71;UBERON:0003075!9.64e-28!71;UBERON:0007284!9.64e-28!71;UBERON:0001017!7.47e-27!73;UBERON:0005743!7.47e-27!73;UBERON:0000073!1.95e-26!75;UBERON:0001016!1.95e-26!75;UBERON:0004121!4.16e-25!102;UBERON:0000924!4.16e-25!102;UBERON:0006601!4.16e-25!102;UBERON:0000033!6.74e-24!63;UBERON:0001049!1.53e-23!52;UBERON:0005068!1.53e-23!52;UBERON:0006241!1.53e-23!52;UBERON:0007135!1.53e-23!52;UBERON:0000955!2.27e-22!50;UBERON:0006238!2.27e-22!50;UBERON:0002616!9.46e-22!49;UBERON:0003056!4.19e-20!49;UBERON:0002020!2.05e-18!34;UBERON:0003080!1.06e-17!40;UBERON:0002780!4.89e-17!39;UBERON:0001890!4.89e-17!39;UBERON:0006240!4.89e-17!39;UBERON:0002791!2.20e-15!29;UBERON:0003528!2.20e-15!29;UBERON:0001893!2.20e-15!29;UBERON:0000956!7.41e-11!21;UBERON:0001869!7.41e-11!21;UBERON:0000203!7.41e-11!21;UBERON:0007811!9.10e-11!86;UBERON:0000153!2.46e-09!94;UBERON:0002619!9.19e-09!17;UBERON:0002021!3.02e-08!10;UBERON:0000411!3.02e-08!10;UBERON:0001950!3.02e-08!10 | |ontology_enrichment_uberon=UBERON:0002346!9.64e-28!71;UBERON:0003075!9.64e-28!71;UBERON:0007284!9.64e-28!71;UBERON:0001017!7.47e-27!73;UBERON:0005743!7.47e-27!73;UBERON:0000073!1.95e-26!75;UBERON:0001016!1.95e-26!75;UBERON:0004121!4.16e-25!102;UBERON:0000924!4.16e-25!102;UBERON:0006601!4.16e-25!102;UBERON:0000033!6.74e-24!63;UBERON:0001049!1.53e-23!52;UBERON:0005068!1.53e-23!52;UBERON:0006241!1.53e-23!52;UBERON:0007135!1.53e-23!52;UBERON:0000955!2.27e-22!50;UBERON:0006238!2.27e-22!50;UBERON:0002616!9.46e-22!49;UBERON:0003056!4.19e-20!49;UBERON:0002020!2.05e-18!34;UBERON:0003080!1.06e-17!40;UBERON:0002780!4.89e-17!39;UBERON:0001890!4.89e-17!39;UBERON:0006240!4.89e-17!39;UBERON:0002791!2.20e-15!29;UBERON:0003528!2.20e-15!29;UBERON:0001893!2.20e-15!29;UBERON:0000956!7.41e-11!21;UBERON:0001869!7.41e-11!21;UBERON:0000203!7.41e-11!21;UBERON:0007811!9.10e-11!86;UBERON:0000153!2.46e-09!94;UBERON:0002619!9.19e-09!17;UBERON:0002021!3.02e-08!10;UBERON:0000411!3.02e-08!10;UBERON:0001950!3.02e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.48e-29,64;UBERON:0003075,1.48e-29,64;UBERON:0007284,1.48e-29,64;UBERON:0001017,1.75e-29,73;UBERON:0000073,3.86e-28,54;UBERON:0001016,6.21e-28,75;UBERON:0001049,1.91e-26,52;UBERON:0005068,1.91e-26,52;UBERON:0006241,1.91e-26,52;UBERON:0007135,1.91e-26,52;UBERON:0004121,1.83e-25,95;UBERON:0000924,1.83e-25,95;UBERON:0006601,1.83e-25,95;UBERON:0010371,2.26e-24,73;UBERON:0000955,1.05e-22,47;UBERON:0006238,1.05e-22,47;UBERON:0003056,1.57e-22,49;UBERON:0002616,5.48e-22,46;UBERON:0002020,1.33e-21,34;UBERON:0003080,4.96e-20,40;UBERON:0002780,3.02e-19,39;UBERON:0001890,3.02e-19,39;UBERON:0006240,3.02e-19,39;UBERON:0010314,4.29e-19,92;UBERON:0003528,5.46e-18,29;UBERON:0002791,5.46e-18,29;UBERON:0001893,5.46e-18,29;UBERON:0000956,1.35e-12,21;UBERON:0001869,1.35e-12,21;UBERON:0000203,1.35e-12,21;UBERON:0002619,4.19e-10,17;UBERON:0002021,1.58e-09,10;UBERON:0000411,1.58e-09,10;UBERON:0001950,1.58e-09,10;UBERON:0003076,6.24e-07,12;UBERON:0003057,6.24e-07,12 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,72.3718399185604,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.436050312760893,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,33.3822160418336,43.3772603003067,33.5930643858275,0.338844532069132,0.889294796111139,0,0.988866362566974,0.7104801149461,0,0.384218305321555,23.7449212186414,24.8410926530311,23.3460707100034,137.112472513826,159.246218026113,18.4961106814581,12.9391385874619,20.2228133054205,135.442533629248,182.975955476074,202.607017364985,26.9048026969595,21.3166209593614,17.7110545989298,104.693624625518,181.209560430201,192.06739745545,97.522061791784,118.168495063255,57.038230422542,0.454357159999104,0.755715601067855,0,0,0,0,0,0,16.7128859956785,0,0,0,1.69012103732017,0,0,0,0,0,0,10.1623652949963,0,6.08612770165782,4.68410382268567,4.26251669636998,2.7673859670727,3.46662073271032,4.8211369925639,1.13099932196708,1.73036477414062,0.289198713839823,0,0.485300549842228,0,0,0,43.6243387547205,35.3964934514739,0,0,0,0,226.483446780092,1104.86395580698,68.2303131972854,430.562841116269,451.337782188033,169.347256316041,343.951477703646,2.85150218780886,0.248813941220186,0,10.1012090825508,0.260240885925407,1.60931473103431,3.06105620669094,9.19299388797862,13.1990808353576,13.1957131893395,14.2426621330788,21.4723797713383,0,0.756424320671277,0.527853372491847,1.31517439456545,0.278047249225598,0.696504333044333,0,2.18937693500343,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.462801338662135,0.232533944750408,0,0.116765342367169,0.658239399653922,0,0,0.146199987425332,0.219550115291051,0,1345.22480096472,48.2622632058844,0,1.32225283331772,0.213288250535234,1.39342003116263,2.19074684247559,1.4117846723634,1.33426826306922,1.90225626112559,0.949058123089023,2.47048432086016,1.00534083520108,1.59165177632921,0.974820435595601,0,0.648414149624083,0.398282546508734,0.948339504765408,1.37098215131675,0,0.814605311381257,0.581857461502877,0.210407459670956,0.316182685621286,0,0,0,0,1.66845105716094,0.589676985339609,0.674586337154561,0,0.72353147925725,0.50925170356284,0.575392274901621,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.651859905768103,0.169745085775188,0.704070744865506,1.17254380209271,0.714130922658041,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,93.2798927829071,78.6490417033683,0,0,1.26203287766503,2.73307121007647,4.52389135238878,0.716906393857656,2.00518806674155,1.69845918473299,3.23848561339915,1.46127928955656,4.34816555741176,85.7927914846225,0.141940085208269,4.62970569534864,2.60619134965722,0.989820737835213,0,2.42780636154981,3.62788268357701,2.07465587731488,3.2483208216885,1.22974059177571,1.29214146584111,1.81766864738753,1.06949213515416,0.632073515871632,0,0,1.36175842301515,0.900305470156551,1.81102157295856,1.71469628025274,2.6601035046341,4.8159580752559,4.77192159746151,7.00269382963578,0.23467170806371,8.47328283455281,2.8668691747145,0,0,0.0603129249281559,0,0,0.291480836629851,82.5142593946768,0,0,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,1.21991680276109,0.648032044930808,0.418176592028937,0,0.539457385539283,0.41326727862668,0,0.518459893167171,0.621339313086926,0,0.897099276263873,0.827292452285488,0.972255941720238,1.54991788173277,1.520605129417,1.05621514781179,0.39061315453185,0.419437377702843,0,0,0.316011120628178,0.202725215290164,0.821687657318618,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,2.12508553435409,0,0.36630324853453,0.214368379079066,0,304.965995013216,290.925549472536,304.20751763632,241.797427557568,432.972152495046,424.531370333012,434.714490149283,419.249040201749,374.748772229937,457.182355276857,2.17953429926771,1.19707462020309,4.43907374960749,6.32077464377565,9.22297915563122,10.1113929647508,7.77863547305653,10.3017528619447,6.09746498224449,8.33900798820532,7.85785829659743,6.03604292435444,6.55490552289177,6.14641463086745,8.15583659169708,7.1444053692461,8.22778714208474,5.59436739344745,9.47797571847605,6.18235464564469,7.20025430009372,5.50174999093946,7.62995807831427,6.54058874845478,6.39943786824248,6.76916863133412,9.14639864363863,8.94437018888666,7.19761803383067,11.2228454331548,8.42308628681636,7.09232273104057,6.95692773388472,7.2820315357404,7.13754460630223,19.7350356570977,7.95367468714389,7.30561583764214,4.97349663378993,5.95596831622692,4.63735671240843 | |phase1_expression=3.04282809499109,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,72.3718399185604,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.436050312760893,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,33.3822160418336,43.3772603003067,33.5930643858275,0.338844532069132,0.889294796111139,0,0.988866362566974,0.7104801149461,0,0.384218305321555,23.7449212186414,24.8410926530311,23.3460707100034,137.112472513826,159.246218026113,18.4961106814581,12.9391385874619,20.2228133054205,135.442533629248,182.975955476074,202.607017364985,26.9048026969595,21.3166209593614,17.7110545989298,104.693624625518,181.209560430201,192.06739745545,97.522061791784,118.168495063255,57.038230422542,0.454357159999104,0.755715601067855,0,0,0,0,0,0,16.7128859956785,0,0,0,1.69012103732017,0,0,0,0,0,0,10.1623652949963,0,6.08612770165782,4.68410382268567,4.26251669636998,2.7673859670727,3.46662073271032,4.8211369925639,1.13099932196708,1.73036477414062,0.289198713839823,0,0.485300549842228,0,0,0,43.6243387547205,35.3964934514739,0,0,0,0,226.483446780092,1104.86395580698,68.2303131972854,430.562841116269,451.337782188033,169.347256316041,343.951477703646,2.85150218780886,0.248813941220186,0,10.1012090825508,0.260240885925407,1.60931473103431,3.06105620669094,9.19299388797862,13.1990808353576,13.1957131893395,14.2426621330788,21.4723797713383,0,0.756424320671277,0.527853372491847,1.31517439456545,0.278047249225598,0.696504333044333,0,2.18937693500343,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.462801338662135,0.232533944750408,0,0.116765342367169,0.658239399653922,0,0,0.146199987425332,0.219550115291051,0,1345.22480096472,48.2622632058844,0,1.32225283331772,0.213288250535234,1.39342003116263,2.19074684247559,1.4117846723634,1.33426826306922,1.90225626112559,0.949058123089023,2.47048432086016,1.00534083520108,1.59165177632921,0.974820435595601,0,0.648414149624083,0.398282546508734,0.948339504765408,1.37098215131675,0,0.814605311381257,0.581857461502877,0.210407459670956,0.316182685621286,0,0,0,0,1.66845105716094,0.589676985339609,0.674586337154561,0,0.72353147925725,0.50925170356284,0.575392274901621,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.651859905768103,0.169745085775188,0.704070744865506,1.17254380209271,0.714130922658041,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,93.2798927829071,78.6490417033683,0,0,1.26203287766503,2.73307121007647,4.52389135238878,0.716906393857656,2.00518806674155,1.69845918473299,3.23848561339915,1.46127928955656,4.34816555741176,85.7927914846225,0.141940085208269,4.62970569534864,2.60619134965722,0.989820737835213,0,2.42780636154981,3.62788268357701,2.07465587731488,3.2483208216885,1.22974059177571,1.29214146584111,1.81766864738753,1.06949213515416,0.632073515871632,0,0,1.36175842301515,0.900305470156551,1.81102157295856,1.71469628025274,2.6601035046341,4.8159580752559,4.77192159746151,7.00269382963578,0.23467170806371,8.47328283455281,2.8668691747145,0,0,0.0603129249281559,0,0,0.291480836629851,82.5142593946768,0,0,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,1.21991680276109,0.648032044930808,0.418176592028937,0,0.539457385539283,0.41326727862668,0,0.518459893167171,0.621339313086926,0,0.897099276263873,0.827292452285488,0.972255941720238,1.54991788173277,1.520605129417,1.05621514781179,0.39061315453185,0.419437377702843,0,0,0.316011120628178,0.202725215290164,0.821687657318618,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,2.12508553435409,0,0.36630324853453,0.214368379079066,0,304.965995013216,290.925549472536,304.20751763632,241.797427557568,432.972152495046,424.531370333012,434.714490149283,419.249040201749,374.748772229937,457.182355276857,2.17953429926771,1.19707462020309,4.43907374960749,6.32077464377565,9.22297915563122,10.1113929647508,7.77863547305653,10.3017528619447,6.09746498224449,8.33900798820532,7.85785829659743,6.03604292435444,6.55490552289177,6.14641463086745,8.15583659169708,7.1444053692461,8.22778714208474,5.59436739344745,9.47797571847605,6.18235464564469,7.20025430009372,5.50174999093946,7.62995807831427,6.54058874845478,6.39943786824248,6.76916863133412,9.14639864363863,8.94437018888666,7.19761803383067,11.2228454331548,8.42308628681636,7.09232273104057,6.95692773388472,7.2820315357404,7.13754460630223,19.7350356570977,7.95367468714389,7.30561583764214,4.97349663378993,5.95596831622692,4.63735671240843 | ||
|short_description=p1@Hpca | |short_description=p1@Hpca | ||
}} | }} |
Latest revision as of 09:12, 26 September 2015
Short description: | p1@Hpca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hpca_5end |
Coexpression cluster: | MCL_coexpression_mm9:235 |
Association with transcript: | 0bp_to_ENSMUST00000030572, NM_010471, uc008uwd.2_5end |
EntrezGene: | Hpca |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.18e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.18e-15 | 23 |
neuron | 5.15e-15 | 33 |
neuronal stem cell | 5.15e-15 | 33 |
neuroblast | 5.15e-15 | 33 |
electrically signaling cell | 5.15e-15 | 33 |
electrically responsive cell | 9.54e-11 | 39 |
electrically active cell | 9.54e-11 | 39 |
ectodermal cell | 5.42e-10 | 44 |
neurectodermal cell | 5.42e-10 | 44 |
neural cell | 6.74e-10 | 43 |