FFCP PHASE1:Mm9::chr16:5013653..5013662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66049 | |EntrezGene=66049 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q3TDK6 | |UniProt=Q3TDK6 | ||
|association_with_transcript=-7bp_to_NM_133185,uc007ybk.1_5end | |association_with_transcript=-7bp_to_NM_133185,uc007ybk.1_5end | ||
|cluster_id=chr16:5013653..5013662,- | |||
|description=CAGE_peak_2_at_Rogdi_5end | |description=CAGE_peak_2_at_Rogdi_5end | ||
|id=chr16:5013653..5013662,- | |id=chr16:5013653..5013662,- | ||
|ontology_enrichment_celltype=CL:0000117!7.89e-12!23;CL:0000337!7.89e-12!23;CL:0000221!4.42e-08!44;CL:0000133!4.42e-08!44;CL:0002319!4.72e-08!43 | |ontology_enrichment_celltype=CL:0000117!7.89e-12!23;CL:0000337!7.89e-12!23;CL:0000221!4.42e-08!44;CL:0000133!4.42e-08!44;CL:0002319!4.72e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.83e-12,23;CL:0000337,4.83e-12,23;CL:0000221,8.95e-08,44;CL:0000133,8.95e-08,44;CL:0002319,9.66e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.63e-25!52;UBERON:0005068!5.63e-25!52;UBERON:0006241!5.63e-25!52;UBERON:0007135!5.63e-25!52;UBERON:0001017!1.90e-24!73;UBERON:0005743!1.90e-24!73;UBERON:0000955!8.17e-24!50;UBERON:0006238!8.17e-24!50;UBERON:0000073!2.26e-23!75;UBERON:0001016!2.26e-23!75;UBERON:0002616!3.67e-23!49;UBERON:0000033!1.17e-22!63;UBERON:0002346!1.69e-20!71;UBERON:0003075!1.69e-20!71;UBERON:0007284!1.69e-20!71;UBERON:0004121!3.25e-20!102;UBERON:0000924!3.25e-20!102;UBERON:0006601!3.25e-20!102;UBERON:0003080!3.56e-18!40;UBERON:0002020!3.93e-18!34;UBERON:0002780!1.90e-17!39;UBERON:0001890!1.90e-17!39;UBERON:0006240!1.90e-17!39;UBERON:0003056!2.38e-17!49;UBERON:0002791!2.37e-15!29;UBERON:0003528!2.37e-15!29;UBERON:0001893!2.37e-15!29;UBERON:0000025!2.14e-13!114;UBERON:0004111!3.56e-13!122;UBERON:0000956!2.23e-11!21;UBERON:0001869!2.23e-11!21;UBERON:0000203!2.23e-11!21;UBERON:0002619!1.49e-09!17;UBERON:0000153!2.98e-08!94;UBERON:0002021!1.27e-07!10;UBERON:0000411!1.27e-07!10;UBERON:0001950!1.27e-07!10;UBERON:0007811!1.36e-07!86;UBERON:0003076!2.19e-07!12;UBERON:0003057!2.19e-07!12 | |ontology_enrichment_uberon=UBERON:0001049!5.63e-25!52;UBERON:0005068!5.63e-25!52;UBERON:0006241!5.63e-25!52;UBERON:0007135!5.63e-25!52;UBERON:0001017!1.90e-24!73;UBERON:0005743!1.90e-24!73;UBERON:0000955!8.17e-24!50;UBERON:0006238!8.17e-24!50;UBERON:0000073!2.26e-23!75;UBERON:0001016!2.26e-23!75;UBERON:0002616!3.67e-23!49;UBERON:0000033!1.17e-22!63;UBERON:0002346!1.69e-20!71;UBERON:0003075!1.69e-20!71;UBERON:0007284!1.69e-20!71;UBERON:0004121!3.25e-20!102;UBERON:0000924!3.25e-20!102;UBERON:0006601!3.25e-20!102;UBERON:0003080!3.56e-18!40;UBERON:0002020!3.93e-18!34;UBERON:0002780!1.90e-17!39;UBERON:0001890!1.90e-17!39;UBERON:0006240!1.90e-17!39;UBERON:0003056!2.38e-17!49;UBERON:0002791!2.37e-15!29;UBERON:0003528!2.37e-15!29;UBERON:0001893!2.37e-15!29;UBERON:0000025!2.14e-13!114;UBERON:0004111!3.56e-13!122;UBERON:0000956!2.23e-11!21;UBERON:0001869!2.23e-11!21;UBERON:0000203!2.23e-11!21;UBERON:0002619!1.49e-09!17;UBERON:0000153!2.98e-08!94;UBERON:0002021!1.27e-07!10;UBERON:0000411!1.27e-07!10;UBERON:0001950!1.27e-07!10;UBERON:0007811!1.36e-07!86;UBERON:0003076!2.19e-07!12;UBERON:0003057!2.19e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-26,54;UBERON:0001049,1.83e-25,52;UBERON:0005068,1.83e-25,52;UBERON:0006241,1.83e-25,52;UBERON:0007135,1.83e-25,52;UBERON:0001017,1.61e-24,73;UBERON:0001016,3.53e-23,75;UBERON:0000955,1.93e-22,47;UBERON:0006238,1.93e-22,47;UBERON:0002346,2.47e-22,64;UBERON:0003075,2.47e-22,64;UBERON:0007284,2.47e-22,64;UBERON:0002616,8.70e-22,46;UBERON:0004121,1.04e-20,95;UBERON:0000924,1.04e-20,95;UBERON:0006601,1.04e-20,95;UBERON:0010371,9.95e-19,73;UBERON:0003080,1.61e-18,40;UBERON:0002020,1.78e-18,34;UBERON:0002780,8.88e-18,39;UBERON:0001890,8.88e-18,39;UBERON:0006240,8.88e-18,39;UBERON:0003056,1.12e-17,49;UBERON:0010314,1.84e-17,92;UBERON:0003528,1.23e-15,29;UBERON:0002791,1.23e-15,29;UBERON:0001893,1.23e-15,29;UBERON:0000025,3.58e-13,114;UBERON:0004111,7.10e-13,122;UBERON:0000956,1.39e-11,21;UBERON:0001869,1.39e-11,21;UBERON:0000203,1.39e-11,21;UBERON:0002619,1.02e-09,17;UBERON:0002021,9.49e-08,10;UBERON:0000411,9.49e-08,10;UBERON:0001950,9.49e-08,10;UBERON:0003076,1.65e-07,12;UBERON:0003057,1.65e-07,12 | |||
|phase1_expression=1.92178616525753,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0.387369970324729,0,0,0,0.0797721589953364,0,0,0.333109761815663,0,0,0.315462165358238,1.50825876966313,0.42438965179803,3.57181818634493,0.992909512008853,1.30599894569468,0.799962113967033,1.14704640533585,0,0,0.215471232685889,0.380046838912748,0,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0,3.76678467663217,0,1.0470474879476,4.1176204162171,1.36609096991689,4.36959317728038,1.00717454380462,1.82478476195126,0.734187008646726,6.25913075478431,2.61630187656536,2.19686182734472,2.91644848611425,3.91961980551015,4.31257693094915,0.838913030288682,0,0,0.514518872071894,1.14613375975503,0.515672092277442,5.26022798234954,7.40587370980846,6.33831403506179,2.03306719241479,2.66788438833342,2.2497492932035,0.988866362566974,1.4209602298922,4.19440154725767,4.61061966385865,3.94020526772215,5.13022565660425,3.99617426567626,9.99778445413313,10.6016899656774,4.40966877173835,2.77951865952885,3.67687514644008,4.40463523997555,10.9811110753261,9.5236050618871,5.67111037239834,4.57438218012048,2.6045668527838,11.725685958058,9.56696437053856,7.48711414106369,6.48182888042069,5.55249555116501,5.21918448310842,0.984440513331393,1.51143120213571,1.15945795480671,1.72084775396277,2.03991400112325,2.69851595818909,3.89865850468601,4.92829575807069,1.68533304158102,1.02258193546835,0.779358013808606,0.70667914902068,2.11265129665021,0,0,0,0.865964164044856,0,0.505524445014783,1.25602267690966,2.84831672011889,2.22663208597237,1.90833859442749,2.43572382649713,1.61430848079241,1.50722640552623,1.17588707135705,1.25666591329675,2.71914464507811,2.31358971071859,0,0.808834249737046,0.662524555381181,1.45462575940567,3.72783522436244,11.1256702864388,7.54008144528438,0.510914110417183,0.239630249011841,2.39961092397363,0.381210681219194,17.6752954497691,16.0125210986519,4.64921102817598,11.6462294528825,8.95004100656157,13.714010940931,10.5456820994042,0.916554274652847,1.8661045591514,3.0326731012041,3.78795340595653,1.56144531555244,2.06911893990126,1.62055916824814,2.10986744970001,1.97305847538851,1.66547836370305,2.06143794031403,7.76110112217047,2.15567992932842,2.26927296201383,2.46331573829528,2.41115305670332,3.05851974148158,1.74126083261083,1.02891068203972,2.38841120182192,0.702213187313235,1.28673953557358,0.284163499395593,3.10688658803253,2.81431271977315,1.98068267607116,1.65721314909647,1.57411385397923,2.1597395804233,2.09280550275367,1.07309360559848,0.817357396570186,2.46839774870221,2.13417703302824,2.75633952455909,1.60819986167866,2.19550115291051,1.8788898626452,12.4071069652835,4.32199371992995,0,1.32225283331772,1.70630600428187,2.32236671860439,1.80414445850931,1.4117846723634,0.889512175379481,0.951128130562796,1.42358718463353,0.164698954724011,0.251335208800269,0.596869416123452,1.36474860983384,0,0.864552199498777,0.199141273254367,3.22435431620239,1.71372768914593,0,1.22190796707189,2.71533482034676,1.54298803758701,2.40298841072178,2.36176236767363,3.45397201251025,1.48076596706161,0,1.33476084572875,0.589676985339609,1.12431056192427,0.608580364165509,1.4470629585145,1.2731292589071,1.15078454980324,1.94562272130042,1.37280706594041,0,1.86070473834252,2.80833905803104,2.52578877947112,1.97337154874103,0,2.77129785249907,1.32643988239339,1.79261474086228,1.69745085775188,2.11221223459652,2.01007508930179,2.38043640886014,0.975668239288994,1.41871629695572,1.99318220683897,2.71073106717728,1.80249646187312,1.89953480052485,1.01254341007058,3.01582567878545,1.08781136763742,1.96705709207614,1.10374698521893,10.4357883492065,9.25972324078405,1.14754461763673,0.757412781613119,0.631016438832513,1.95219372148319,0.861693590931196,0.477937595905104,0.445597348164788,1.98153571552183,0,0.584511715822624,1.97643888973262,9.63963949265421,2.55492153374884,2.67098405500883,2.11753047159649,1.97964147567043,0,2.42780636154981,1.81394134178851,1.88605079755898,2.06711325016541,2.76691633149535,1.55056975900933,2.18120237686503,1.06949213515416,1.58018378967908,1.05418608574999,0,3.06395645178409,2.16073312837572,4.52755393239641,1.71469628025274,3.90148514013002,2.14042581122485,2.79733335023606,2.43571959291679,1.64270195644597,2.54198485036584,1.98475558249466,1.81374878235628,0.968786560175433,0.784068024066026,1.07435109602823,1.80554989719567,0.582961673259701,8.90041449650446,0.512612642393558,1.857481811669,1.48155621895769,0.565105371014073,0.410082683163076,0.686334519619568,0.169978429993855,0.419854356970974,0.138199973804424,2.86401185404534,3.16335993581135,1.62655573701479,1.94409613479242,1.25452977608681,2.18362563746178,2.83215127408124,1.23980183588004,1.83229159388821,0.259229946583586,3.10669656543463,7.89170114157866,2.8408143748356,1.48912641411388,3.30567020184881,2.45403664607689,2.53434188236167,2.11243029562357,1.3020438484395,3.04092098834561,3.14059357073808,6.91272015018877,1.26404448251271,1.41907650703115,1.33524244314275,0.649604114888975,0.716106782669926,0.19868135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| ||
|short_description=p2@Rogdi | |short_description=p2@Rogdi | ||
}} | }} |
Latest revision as of 15:28, 25 September 2015
Short description: | p2@Rogdi |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rogdi_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -7bp_to_NM_133185, uc007ybk.1_5end |
EntrezGene: | Rogdi |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.83e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.83e-12 | 23 |
ectodermal cell | 8.95e-08 | 44 |
neurectodermal cell | 8.95e-08 | 44 |
neural cell | 9.66e-08 | 43 |