FFCP PHASE1:Mm9::chr2:25463941..25463952,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227624 | |EntrezGene=227624 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q5U3K5 | |UniProt=Q5U3K5 | ||
|association_with_transcript=13bp_to_NM_001024616,uc008isr.1,uc008ist.1,uc008isu.1_5end | |association_with_transcript=13bp_to_NM_001024616,uc008isr.1,uc008ist.1,uc008isu.1_5end | ||
|cluster_id=chr2:25463941..25463952,- | |||
|description=CAGE_peak_2_at_B230208H17Rik_5end | |description=CAGE_peak_2_at_B230208H17Rik_5end | ||
|id=chr2:25463941..25463952,- | |id=chr2:25463941..25463952,- | ||
|ontology_enrichment_celltype=CL:0000117!4.48e-09!23;CL:0000337!4.48e-09!23;CL:0000540!2.10e-08!33;CL:0000047!2.10e-08!33;CL:0000031!2.10e-08!33;CL:0000404!2.10e-08!33 | |ontology_enrichment_celltype=CL:0000117!4.48e-09!23;CL:0000337!4.48e-09!23;CL:0000540!2.10e-08!33;CL:0000047!2.10e-08!33;CL:0000031!2.10e-08!33;CL:0000404!2.10e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.12e-09,23;CL:0000337,2.12e-09,23;CL:0000540,1.06e-08,33;CL:0000047,1.06e-08,33;CL:0000031,1.06e-08,33;CL:0000404,1.06e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.61e-17!71;UBERON:0003075!2.61e-17!71;UBERON:0007284!2.61e-17!71;UBERON:0001017!7.27e-17!73;UBERON:0005743!7.27e-17!73;UBERON:0000955!1.01e-16!50;UBERON:0006238!1.01e-16!50;UBERON:0001049!1.19e-16!52;UBERON:0005068!1.19e-16!52;UBERON:0006241!1.19e-16!52;UBERON:0007135!1.19e-16!52;UBERON:0004121!2.21e-16!102;UBERON:0000924!2.21e-16!102;UBERON:0006601!2.21e-16!102;UBERON:0002616!4.63e-16!49;UBERON:0002020!5.75e-16!34;UBERON:0000073!1.29e-15!75;UBERON:0001016!1.29e-15!75;UBERON:0000033!2.01e-15!63;UBERON:0002791!2.53e-14!29;UBERON:0003528!2.53e-14!29;UBERON:0001893!2.53e-14!29;UBERON:0003080!6.21e-14!40;UBERON:0003056!6.37e-14!49;UBERON:0002780!2.18e-13!39;UBERON:0001890!2.18e-13!39;UBERON:0006240!2.18e-13!39;UBERON:0000956!6.57e-11!21;UBERON:0001869!6.57e-11!21;UBERON:0000203!6.57e-11!21;UBERON:0002619!2.73e-09!17;UBERON:0000153!3.19e-09!94;UBERON:0007811!3.93e-08!86;UBERON:0002021!1.40e-07!10;UBERON:0000411!1.40e-07!10;UBERON:0001950!1.40e-07!10 | |ontology_enrichment_uberon=UBERON:0002346!2.61e-17!71;UBERON:0003075!2.61e-17!71;UBERON:0007284!2.61e-17!71;UBERON:0001017!7.27e-17!73;UBERON:0005743!7.27e-17!73;UBERON:0000955!1.01e-16!50;UBERON:0006238!1.01e-16!50;UBERON:0001049!1.19e-16!52;UBERON:0005068!1.19e-16!52;UBERON:0006241!1.19e-16!52;UBERON:0007135!1.19e-16!52;UBERON:0004121!2.21e-16!102;UBERON:0000924!2.21e-16!102;UBERON:0006601!2.21e-16!102;UBERON:0002616!4.63e-16!49;UBERON:0002020!5.75e-16!34;UBERON:0000073!1.29e-15!75;UBERON:0001016!1.29e-15!75;UBERON:0000033!2.01e-15!63;UBERON:0002791!2.53e-14!29;UBERON:0003528!2.53e-14!29;UBERON:0001893!2.53e-14!29;UBERON:0003080!6.21e-14!40;UBERON:0003056!6.37e-14!49;UBERON:0002780!2.18e-13!39;UBERON:0001890!2.18e-13!39;UBERON:0006240!2.18e-13!39;UBERON:0000956!6.57e-11!21;UBERON:0001869!6.57e-11!21;UBERON:0000203!6.57e-11!21;UBERON:0002619!2.73e-09!17;UBERON:0000153!3.19e-09!94;UBERON:0007811!3.93e-08!86;UBERON:0002021!1.40e-07!10;UBERON:0000411!1.40e-07!10;UBERON:0001950!1.40e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.51e-18,54;UBERON:0002346,2.31e-17,64;UBERON:0003075,2.31e-17,64;UBERON:0007284,2.31e-17,64;UBERON:0001017,2.37e-17,73;UBERON:0001049,2.87e-17,52;UBERON:0005068,2.87e-17,52;UBERON:0006241,2.87e-17,52;UBERON:0007135,2.87e-17,52;UBERON:0002020,1.37e-16,34;UBERON:0010371,2.28e-16,73;UBERON:0001016,5.69e-16,75;UBERON:0004121,6.93e-16,95;UBERON:0000924,6.93e-16,95;UBERON:0006601,6.93e-16,95;UBERON:0000955,1.56e-15,47;UBERON:0006238,1.56e-15,47;UBERON:0003528,7.07e-15,29;UBERON:0002791,7.07e-15,29;UBERON:0001893,7.07e-15,29;UBERON:0002616,7.30e-15,46;UBERON:0010314,2.19e-14,92;UBERON:0003080,4.37e-14,40;UBERON:0003056,6.57e-14,49;UBERON:0002780,1.61e-13,39;UBERON:0001890,1.61e-13,39;UBERON:0006240,1.61e-13,39;UBERON:0000956,2.59e-11,21;UBERON:0001869,2.59e-11,21;UBERON:0000203,2.59e-11,21;UBERON:0002619,1.26e-09,17;UBERON:0002021,7.64e-08,10;UBERON:0000411,7.64e-08,10;UBERON:0001950,7.64e-08,10 | |||
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|phase1_expression=1.28119077683835,0.348975407639361,1.81999695755814,1.20985684522732,1.00179145989269,1.17515490338323,1.16806320297763,0.129123323441576,1.54867594366833,2.10658073689794,1.19852577757853,1.35612670292072,1.02720437958723,0.786783621770977,0,0.202475267389826,0.699561878128147,0.315462165358238,0.822686601634433,1.27316895539409,3.14660173558958,0.992909512008853,0.261199789138935,0.319984845586813,0.91763712426868,1.14846392823004,0.86152399231815,1.72376986148711,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0.577703239502549,1.32987716286794,1.02084678131185,0,0,0,0,0,0.485510353031154,1.00717454380462,0.912392380975631,0.550640256485045,0,0.436050312760893,2.19686182734472,1.55543919259427,0.979904951377538,0,0.503347818173209,0,1.68046899571232,0.514518872071894,1.71920063963254,0,2.42779753031517,2.64495489636016,1.26766280701236,0.677689064138264,0.889294796111139,0.899899717281399,0,0,1.19840044207362,0.768436610643109,3.00699875694585,2.43010688997043,2.3135745748652,3.42781181284564,1.76694832761291,2.32732518508413,2.68367318851062,2.75765635983006,4.40463523997555,4.72443150915195,3.37934373163736,2.63772575460388,2.10421580285542,2.08365348222704,4.4669279840221,2.8138130501584,4.88954392885792,2.06240009831567,3.27454865837937,3.72798891650601,0.530083353332288,0.755715601067855,1.15945795480671,1.72084775396277,0,1.07940638327563,0,0.448026887097336,1.12355536105401,1.36344258062446,0.519572009205738,0.35333957451034,0.985903938436763,0,0,0,0.216491041011214,0.506719730950197,0,1.48439043634778,1.03575153458869,2.52351636410202,1.73485326766136,0.913396434936424,0.922461989024234,1.65794904607885,2.4693628498498,4.02133092254962,1.73036477414062,3.32578520915797,0.884610551949874,1.29413479957927,0.220841518460394,1.45462575940567,0,3.80615036115011,7.54008144528438,1.53274233125155,0.599075622529601,0.599902730993408,0.635351135365324,3.89455662452539,4.11750542536764,3.76963056338593,6.43149984711423,4.85859368927628,3.74018480207208,5.51620294430376,1.83310854930569,1.49288364732112,1.51633655060205,1.68353484709179,0.910843100738926,1.83921683546778,1.80062129805349,1.65775299619287,1.97305847538851,2.17793324484245,1.87403449119458,1.81092359517311,1.94011193639558,2.83659120251729,2.46331573829528,2.19195732427575,2.50242524303038,0.696504333044333,2.88094990971121,2.38841120182192,0.702213187313235,0.51469581422943,0.568326998791185,0.207125772535502,0.938104239924385,0.720248245844059,1.65721314909647,1.37734962223183,0.925602677324269,1.39520366850245,1.60964040839772,1.40118410840603,1.97471819896177,1.47750717671186,2.59420190546738,2.63159977365598,2.63460138349261,1.74468344388483,4.20579897128254,2.57261530948211,0.660837565967596,0.793351699990633,2.98603550749328,1.85789337488351,1.67527699718721,1.21010114774006,0,0.951128130562796,0.949058123089023,0.988193728344065,1.00534083520108,0.795825888164603,1.55971269695296,0,0.648414149624083,0.995706366271836,2.27601481143698,2.05647322697512,1.1270773567308,1.83286195060783,1.16371492300575,1.40271639780637,1.7706230394792,0.885660887877613,1.255989822731,1.72756029490521,2.37162101669719,0.83422552858047,0.393117990226406,0.674586337154561,1.82574109249653,0.72353147925725,0.50925170356284,0.287696137450811,0.972811360650212,0.549122826376163,0,0.372140947668503,0,1.51547326768267,1.07638448113147,1.92977408545347,1.47802552133284,1.13694847062291,1.62964976442026,1.18821560042632,2.11221223459652,1.50755631697634,0.952174563544055,0.975668239288994,1.26108115284953,0.664394068946325,1.91345722388985,1.14704320301017,1.72684981865896,1.01254341007058,0,0,0.491764273019036,1.93155722413313,4.97706828962155,4.92289083687253,0.491804836130026,1.76729649043061,1.89304931649754,1.56175497718655,1.72338718186239,2.86762557543062,1.33679204449436,1.13230612315533,4.04810701674894,1.16902343164525,1.18586333383957,6.10510501201433,2.55492153374884,2.31485284767432,1.79175655288934,2.14461159864296,1.32745138339963,0.485561272309963,1.51161778482376,1.32023555829129,3.2483208216885,0.922305443831782,2.32585463851399,2.18120237686503,2.49548164869305,2.84433082142234,0,2.06271086496374,4.42571487479924,0.900305470156551,2.19909762430683,0.857348140126369,1.41872186913819,1.07021290561242,1.31639216481697,1.522324745573,0.469343416127421,1.0591603543191,1.10264199027481,2.30840754118072,2.26050197374268,1.62844897306021,1.43246812803764,1.64140899745061,0.874442509889552,3.70850604021019,0.341741761595705,2.27025554759545,1.66675074632741,1.50694765603753,0.820165366326151,0.228778173206523,0.849892149969277,1.39951452323658,0.414599921413271,0.954670618015114,1.89801596148681,1.62655573701479,1.51207477150522,2.29997125615916,1.09181281873089,1.34864346384821,1.57041565878138,0.26175594198403,0.648074866458964,0,3.94585057078933,1.04661582230785,1.98550188548517,2.13896307178452,2.0665571756437,2.02747350588934,2.11243029562357,1.95306577265925,2.83120229949419,1.93267296660805,3.74439008135225,1.5800556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| ||
|short_description=p2@B230208H17Rik | |short_description=p2@B230208H17Rik | ||
}} | }} |
Latest revision as of 10:31, 26 September 2015
Short description: | p2@B230208H17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B230208H17Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 13bp_to_NM_001024616, uc008isr.1, uc008ist.1, uc008isu.1_5end |
EntrezGene: | B230208H17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.12e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.12e-09 | 23 |
neuron | 1.06e-08 | 33 |
neuronal stem cell | 1.06e-08 | 33 |
neuroblast | 1.06e-08 | 33 |
electrically signaling cell | 1.06e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.51e-18 | 54 |
neurectoderm | 2.31e-17 | 64 |
neural plate | 2.31e-17 | 64 |
presumptive neural plate | 2.31e-17 | 64 |
central nervous system | 2.37e-17 | 73 |
neural tube | 2.87e-17 | 52 |
neural rod | 2.87e-17 | 52 |
future spinal cord | 2.87e-17 | 52 |
neural keel | 2.87e-17 | 52 |
gray matter | 1.37e-16 | 34 |
ecto-epithelium | 2.28e-16 | 73 |
nervous system | 5.69e-16 | 75 |
ectoderm-derived structure | 6.93e-16 | 95 |
ectoderm | 6.93e-16 | 95 |
presumptive ectoderm | 6.93e-16 | 95 |
brain | 1.56e-15 | 47 |
future brain | 1.56e-15 | 47 |
brain grey matter | 7.07e-15 | 29 |
regional part of telencephalon | 7.07e-15 | 29 |
telencephalon | 7.07e-15 | 29 |
regional part of brain | 7.30e-15 | 46 |
structure with developmental contribution from neural crest | 2.19e-14 | 92 |
anterior neural tube | 4.37e-14 | 40 |
pre-chordal neural plate | 6.57e-14 | 49 |
regional part of forebrain | 1.61e-13 | 39 |
forebrain | 1.61e-13 | 39 |
future forebrain | 1.61e-13 | 39 |
cerebral cortex | 2.59e-11 | 21 |
cerebral hemisphere | 2.59e-11 | 21 |
pallium | 2.59e-11 | 21 |
regional part of cerebral cortex | 1.26e-09 | 17 |
occipital lobe | 7.64e-08 | 10 |
visual cortex | 7.64e-08 | 10 |
neocortex | 7.64e-08 | 10 |