FFCP PHASE1:Mm9::chr4:107353480..107353492,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56296 | |EntrezGene=56296 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |MCL_coexpression_id=141 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_ENSMUST00000131508_5end | |association_with_transcript=72bp_to_ENSMUST00000131508_5end | ||
|cluster_id=chr4:107353480..107353492,- | |||
|description=CAGE_peak_9_at_Dmrtb1_5end | |description=CAGE_peak_9_at_Dmrtb1_5end | ||
|id=chr4:107353480..107353492,- | |id=chr4:107353480..107353492,- | ||
|ontology_enrichment_celltype=CL:0000117!1.17e-11!23;CL:0000337!1.17e-11!23;CL:0002319!5.64e-09!43;CL:0000221!1.13e-08!44;CL:0000133!1.13e-08!44;CL:0000055!4.08e-08!50;CL:0002613!2.31e-07!3;CL:0000120!3.46e-07!3;CL:0000540!3.79e-07!33;CL:0000047!3.79e-07!33;CL:0000031!3.79e-07!33;CL:0000404!3.79e-07!33 | |ontology_enrichment_celltype=CL:0000117!1.17e-11!23;CL:0000337!1.17e-11!23;CL:0002319!5.64e-09!43;CL:0000221!1.13e-08!44;CL:0000133!1.13e-08!44;CL:0000055!4.08e-08!50;CL:0002613!2.31e-07!3;CL:0000120!3.46e-07!3;CL:0000540!3.79e-07!33;CL:0000047!3.79e-07!33;CL:0000031!3.79e-07!33;CL:0000404!3.79e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.46e-25,3;CL:0000120,7.81e-25,3;CL:0000878,1.19e-16,2;CL:0000129,1.19e-16,2;CL:0000117,1.08e-12,23;CL:0000337,1.08e-12,23;CL:0002319,1.36e-11,43;CL:0000221,2.57e-11,44;CL:0000133,2.57e-11,44;CL:0002194,8.37e-09,4;CL:0000766,8.37e-09,4;CL:0000234,8.37e-09,4;CL:0000576,8.37e-09,4;CL:0000235,8.37e-09,4;CL:0000864,8.37e-09,4;CL:0002009,8.37e-09,4;CL:0000040,8.37e-09,4;CL:0000559,8.37e-09,4;CL:0000540,8.71e-09,33;CL:0000047,8.71e-09,33;CL:0000031,8.71e-09,33;CL:0000404,8.71e-09,33;CL:0000393,2.14e-07,39;CL:0000211,2.14e-07,39;CL:0002321,6.83e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.39e-10!73;UBERON:0005743!5.39e-10!73;UBERON:0000073!1.48e-09!75;UBERON:0001016!1.48e-09!75;UBERON:0001049!2.90e-08!52;UBERON:0005068!2.90e-08!52;UBERON:0006241!2.90e-08!52;UBERON:0007135!2.90e-08!52;UBERON:0002020!5.69e-08!34;UBERON:0000369!2.79e-07!5;UBERON:0002435!2.79e-07!5;UBERON:0000204!2.79e-07!5;UBERON:0010082!2.79e-07!5;UBERON:0002616!9.15e-07!49 | |ontology_enrichment_uberon=UBERON:0001017!5.39e-10!73;UBERON:0005743!5.39e-10!73;UBERON:0000073!1.48e-09!75;UBERON:0001016!1.48e-09!75;UBERON:0001049!2.90e-08!52;UBERON:0005068!2.90e-08!52;UBERON:0006241!2.90e-08!52;UBERON:0007135!2.90e-08!52;UBERON:0002020!5.69e-08!34;UBERON:0000369!2.79e-07!5;UBERON:0002435!2.79e-07!5;UBERON:0000204!2.79e-07!5;UBERON:0010082!2.79e-07!5;UBERON:0002616!9.15e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.57e-26,5;UBERON:0002435,1.57e-26,5;UBERON:0000204,1.57e-26,5;UBERON:0010082,1.57e-26,5;UBERON:0002420,9.63e-17,8;UBERON:0007245,9.63e-17,8;UBERON:0010009,9.63e-17,8;UBERON:0010011,9.63e-17,8;UBERON:0000454,9.63e-17,8;UBERON:0001017,2.39e-10,73;UBERON:0001016,4.73e-10,75;UBERON:0004121,9.14e-08,95;UBERON:0000924,9.14e-08,95;UBERON:0006601,9.14e-08,95;UBERON:0003528,4.95e-07,29;UBERON:0002791,4.95e-07,29;UBERON:0001893,4.95e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,2.83243045203437,1.5869729378161,3.1691570175309,0,0,0,0,0,1.49800055259202,1.15265491596466,0.207379224616955,0,0,0.571301968807607,0,0.61245399607477,0.862609239164127,0,0,0,0.153606533256243,9.49581271657396,7.68496206260241,5.2091337055676,0,0,0,0,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25654352112864,0,0,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.859265911718438,0,0,0,0,0,0,0.62272408550506,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,0.183843508450014,0,0,0.320919209591815,0.252697211763798,1.01391719956096,0.188626341386076,0.561849044819294,0.256100609619477,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0.25384382367503,0,0,0.135804113845862,0,0.593175090620871,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,2.83243045203437,1.5869729378161,3.1691570175309,0,0,0,0,0,1.49800055259202,1.15265491596466,0.207379224616955,0,0,0.571301968807607,0,0.61245399607477,0.862609239164127,0,0,0,0.153606533256243,9.49581271657396,7.68496206260241,5.2091337055676,0,0,0,0,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25654352112864,0,0,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.859265911718438,0,0,0,0,0,0,0.62272408550506,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,0.183843508450014,0,0,0.320919209591815,0.252697211763798,1.01391719956096,0.188626341386076,0.561849044819294,0.256100609619477,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0.25384382367503,0,0,0.135804113845862,0,0.593175090620871,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p9@Dmrtb1 | |short_description=p9@Dmrtb1 | ||
}} | }} |
Latest revision as of 03:03, 26 September 2015
Short description: | p9@Dmrtb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Dmrtb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | 72bp_to_ENSMUST00000131508_5end |
EntrezGene: | Dmrtb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.46e-25 | 3 |
granule cell | 7.81e-25 | 3 |
central nervous system macrophage | 1.19e-16 | 2 |
microglial cell | 1.19e-16 | 2 |
CNS neuron (sensu Vertebrata) | 1.08e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-12 | 23 |
neural cell | 1.36e-11 | 43 |
ectodermal cell | 2.57e-11 | 44 |
neurectodermal cell | 2.57e-11 | 44 |
monopoietic cell | 8.37e-09 | 4 |
myeloid leukocyte | 8.37e-09 | 4 |
phagocyte | 8.37e-09 | 4 |
monocyte | 8.37e-09 | 4 |
macrophage | 8.37e-09 | 4 |
tissue-resident macrophage | 8.37e-09 | 4 |
macrophage dendritic cell progenitor | 8.37e-09 | 4 |
monoblast | 8.37e-09 | 4 |
promonocyte | 8.37e-09 | 4 |
neuron | 8.71e-09 | 33 |
neuronal stem cell | 8.71e-09 | 33 |
neuroblast | 8.71e-09 | 33 |
electrically signaling cell | 8.71e-09 | 33 |
electrically responsive cell | 2.14e-07 | 39 |
electrically active cell | 2.14e-07 | 39 |
embryonic cell | 6.83e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.57e-26 | 5 |
striatum | 1.57e-26 | 5 |
ventral part of telencephalon | 1.57e-26 | 5 |
future corpus striatum | 1.57e-26 | 5 |
basal ganglion | 9.63e-17 | 8 |
nuclear complex of neuraxis | 9.63e-17 | 8 |
aggregate regional part of brain | 9.63e-17 | 8 |
collection of basal ganglia | 9.63e-17 | 8 |
cerebral subcortex | 9.63e-17 | 8 |
central nervous system | 2.39e-10 | 73 |
nervous system | 4.73e-10 | 75 |
ectoderm-derived structure | 9.14e-08 | 95 |
ectoderm | 9.14e-08 | 95 |
presumptive ectoderm | 9.14e-08 | 95 |
brain grey matter | 4.95e-07 | 29 |
regional part of telencephalon | 4.95e-07 | 29 |
telencephalon | 4.95e-07 | 29 |