FFCP PHASE1:Mm9::chr1:135811547..135811559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |MCL_coexpression_id=148 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135811547..135811559,- | |||
|description=CAGE_peak_at_chr1:135811547..135811559,- | |description=CAGE_peak_at_chr1:135811547..135811559,- | ||
|id=chr1:135811547..135811559,- | |id=chr1:135811547..135811559,- | ||
|ontology_enrichment_celltype=CL:0002453!1.96e-08!8;CL:0000128!6.49e-07!6;CL:0000126!6.49e-07!6;CL:0000127!6.49e-07!6 | |ontology_enrichment_celltype=CL:0002453!1.96e-08!8;CL:0000128!6.49e-07!6;CL:0000126!6.49e-07!6;CL:0000127!6.49e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.35e-20,8;CL:0000128,7.34e-19,6;CL:0000126,7.34e-19,6;CL:0000127,7.34e-19,6;CL:0000333,1.01e-15,10;CL:0000095,1.01e-15,10;CL:0000243,1.01e-15,10;CL:0000123,1.01e-15,10;CL:0000125,1.01e-15,10;CL:0000030,1.01e-15,10;CL:0000339,1.01e-15,10;CL:0000680,3.00e-12,6;CL:0000187,3.00e-12,6;CL:0000056,3.00e-12,6;CL:0002605,9.58e-11,2;CL:0002604,9.58e-11,2;CL:0000222,1.60e-10,7;CL:0000355,3.25e-08,9;CL:0002321,2.39e-07,70;CL:0000192,3.01e-07,3;CL:0000359,3.01e-07,3;CL:0002539,3.01e-07,3;CL:0000514,3.01e-07,3;CL:0002293,4.56e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,7.44e-11,4;UBERON:0001637,7.44e-11,4;UBERON:0004573,7.44e-11,4;UBERON:0003509,7.44e-11,4;UBERON:0004571,7.44e-11,4;UBERON:0010191,7.44e-11,4;UBERON:0004572,7.44e-11,4;UBERON:0000055,8.85e-09,5;UBERON:0007500,8.85e-09,5;UBERON:0001981,8.85e-09,5;UBERON:0002049,8.85e-09,5;UBERON:0007798,8.85e-09,5;UBERON:0004537,8.85e-09,5;UBERON:0006965,8.85e-09,5;UBERON:0001134,3.25e-08,9;UBERON:0002036,3.25e-08,9;UBERON:0002385,3.25e-08,9;UBERON:0000486,3.25e-08,9;UBERON:0007503,3.25e-08,9;UBERON:0001015,3.25e-08,9;UBERON:0002329,3.25e-08,9;UBERON:0003082,3.25e-08,9;UBERON:0003059,3.25e-08,9;UBERON:0007282,3.25e-08,9;UBERON:0004290,3.25e-08,9;UBERON:0009618,3.25e-08,9;UBERON:0000383,2.10e-07,10;UBERON:0001135,3.01e-07,3;UBERON:0004237,3.01e-07,3;UBERON:0004695,3.01e-07,3;UBERON:0002111,3.01e-07,3;UBERON:0004178,3.01e-07,3;UBERON:0007524,9.72e-07,11;UBERON:0003077,9.72e-07,11;UBERON:0007285,9.72e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.73717714292689,0.734187008646726,0.782391344348039,1.30815093828268,8.12838876117546,15.3599620268684,1.39986421625363,1.43752564364972,0,0,0,1.02903774414379,1.71920063963254,0,0,0,0,0,0,0,2.96659908770092,0,0.599200221036809,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.45839474333043,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,1.53387290320252,0.519572009205738,1.7666978725517,0,2.56652954828636,2.54805239706646,0,0,0,0,0,0,0.593768556259299,0,0.608930956624282,0.230615497256059,0.150722640552623,0,0.502666365318702,0.247194967734374,1.15679485535929,0,0.161766849947409,0.883366073841574,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0,0.373220911830279,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.402619256281115,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0.203651327845314,0,0,0,0.295220295959204,0,0,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,2.87536413054709,0,0.312037673114561,0,0.358794827043824,0,1.10851914099963,0,0,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0,0.664394068946325,0.159454768657487,2.13022309130459,0.518054945597687,1.15719246865209,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0.23467170806371,0.21183207086382,0,0.32977250588296,0,0.180938774784468,0.238744688006273,0.492422699235184,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.772758376128762,0.93841237725591,0.549454872801795,0,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0,0.192906610981141,0,0,0.429742108096597,0,0.441182838239031,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.73717714292689,0.734187008646726,0.782391344348039,1.30815093828268,8.12838876117546,15.3599620268684,1.39986421625363,1.43752564364972,0,0,0,1.02903774414379,1.71920063963254,0,0,0,0,0,0,0,2.96659908770092,0,0.599200221036809,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.45839474333043,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,1.53387290320252,0.519572009205738,1.7666978725517,0,2.56652954828636,2.54805239706646,0,0,0,0,0,0,0.593768556259299,0,0.608930956624282,0.230615497256059,0.150722640552623,0,0.502666365318702,0.247194967734374,1.15679485535929,0,0.161766849947409,0.883366073841574,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0,0.373220911830279,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.402619256281115,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0.203651327845314,0,0,0,0.295220295959204,0,0,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,2.87536413054709,0,0.312037673114561,0,0.358794827043824,0,1.10851914099963,0,0,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0,0.664394068946325,0.159454768657487,2.13022309130459,0.518054945597687,1.15719246865209,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0.23467170806371,0.21183207086382,0,0.32977250588296,0,0.180938774784468,0.238744688006273,0.492422699235184,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.772758376128762,0.93841237725591,0.549454872801795,0,0,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0,0.192906610981141,0,0,0.429742108096597,0,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr1:135811547..135811559,- | |short_description=p@chr1:135811547..135811559,- | ||
}} | }} |
Latest revision as of 19:47, 4 August 2015
Short description: | p@chr1:135811547..135811559, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135811547..135811559, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.35e-20 | 8 |
oligodendrocyte | 7.34e-19 | 6 |
macroglial cell | 7.34e-19 | 6 |
astrocyte | 7.34e-19 | 6 |
migratory neural crest cell | 1.01e-15 | 10 |
neuron associated cell | 1.01e-15 | 10 |
glial cell (sensu Vertebrata) | 1.01e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 1.01e-15 | 10 |
glial cell | 1.01e-15 | 10 |
glioblast | 1.01e-15 | 10 |
glioblast (sensu Vertebrata) | 1.01e-15 | 10 |
muscle precursor cell | 3.00e-12 | 6 |
muscle cell | 3.00e-12 | 6 |
myoblast | 3.00e-12 | 6 |
astrocyte of the cerebral cortex | 9.58e-11 | 2 |
astrocyte of the hippocampus | 9.58e-11 | 2 |
mesodermal cell | 1.60e-10 | 7 |
multi-potent skeletal muscle stem cell | 3.25e-08 | 9 |
embryonic cell | 2.39e-07 | 70 |
smooth muscle cell | 3.01e-07 | 3 |
vascular associated smooth muscle cell | 3.01e-07 | 3 |
aortic smooth muscle cell | 3.01e-07 | 3 |
smooth muscle myoblast | 3.01e-07 | 3 |
epithelial cell of thymus | 4.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
aorta | 7.44e-11 | 4 |
artery | 7.44e-11 | 4 |
systemic artery | 7.44e-11 | 4 |
arterial blood vessel | 7.44e-11 | 4 |
systemic arterial system | 7.44e-11 | 4 |
aortic system | 7.44e-11 | 4 |
arterial system | 7.44e-11 | 4 |
vessel | 8.85e-09 | 5 |
epithelial tube open at both ends | 8.85e-09 | 5 |
blood vessel | 8.85e-09 | 5 |
vasculature | 8.85e-09 | 5 |
vascular system | 8.85e-09 | 5 |
blood vasculature | 8.85e-09 | 5 |
vascular cord | 8.85e-09 | 5 |
skeletal muscle tissue | 3.25e-08 | 9 |
striated muscle tissue | 3.25e-08 | 9 |
muscle tissue | 3.25e-08 | 9 |
multilaminar epithelium | 3.25e-08 | 9 |
epithelial vesicle | 3.25e-08 | 9 |
musculature | 3.25e-08 | 9 |
somite | 3.25e-08 | 9 |
myotome | 3.25e-08 | 9 |
presomitic mesoderm | 3.25e-08 | 9 |
presumptive segmental plate | 3.25e-08 | 9 |
dermomyotome | 3.25e-08 | 9 |
trunk paraxial mesoderm | 3.25e-08 | 9 |
musculature of body | 2.10e-07 | 10 |
smooth muscle tissue | 3.01e-07 | 3 |
blood vessel smooth muscle | 3.01e-07 | 3 |
arterial system smooth muscle | 3.01e-07 | 3 |
artery smooth muscle tissue | 3.01e-07 | 3 |
aorta smooth muscle tissue | 3.01e-07 | 3 |
dense mesenchyme tissue | 9.72e-07 | 11 |
paraxial mesoderm | 9.72e-07 | 11 |
presumptive paraxial mesoderm | 9.72e-07 | 11 |