FFCP PHASE1:Hg19::chr2:191273052..191273121,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:191273052..191273121,+
|short_description=p1@MFSD6
|description=CAGE_peak_1_at_MFSD6_5end
|association_with_transcript=0bp_to_ENST00000392328,ENST000004179...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54842 | |EntrezGene=54842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24711 | |HGNC=24711 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSS7,C9JAZ7,C9J134 | |UniProt=Q6ZSS7,C9JAZ7,C9J134 | ||
|association_with_transcript=0bp_to_ENST00000392328,ENST00000417958,ENST00000432036,NM_017694,uc002urz.2_5end | |||
|cluster_id=chr2:191273052..191273121,+ | |||
|coexpression_cluster_id=C2679 | |||
|description=CAGE_peak_1_at_MFSD6_5end | |||
|id=chr2:191273052..191273121,+ | |||
|ontology_enrichment_celltype=CL:0002031!2.27e-18!124;CL:0000738!1.20e-16!140;CL:0002087!4.22e-15!119;CL:0000557!1.85e-13!71;CL:0000839!1.15e-12!70;CL:0000037!2.67e-11!172;CL:0000566!2.67e-11!172;CL:0002009!9.81e-11!65;CL:0002032!1.09e-10!165;CL:0000837!1.09e-10!165;CL:0002194!5.53e-10!63;CL:0000576!5.53e-10!63;CL:0000040!5.53e-10!63;CL:0000559!5.53e-10!63;CL:0000766!6.17e-10!76;CL:0000988!9.90e-10!182;CL:0002057!1.42e-09!42;CL:0000860!1.26e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.03e-09;39!CL:0000234;7.03e-09;39!CL:0000860;1.50e-08;33!CL:0002057;1.50e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.50e-19,120;CL:0000738,1.49e-17,136;CL:0002087,7.30e-16,115;CL:0000557,1.28e-14,67;CL:0000839,8.87e-14,66;CL:0000037,5.21e-12,168;CL:0002009,9.33e-12,61;CL:0002032,2.17e-11,161;CL:0000837,2.17e-11,161;CL:0000473,2.96e-11,48;CL:0000234,2.96e-11,48;CL:0002194,5.76e-11,59;CL:0000576,5.76e-11,59;CL:0000040,5.76e-11,59;CL:0000559,5.76e-11,59;CL:0000766,5.86e-11,72;CL:0000988,1.06e-10,177;CL:0000860,1.35e-09,42;CL:0002057,1.35e-09,42;CL:0000763,7.71e-07,108;CL:0000049,7.71e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.50e-08;82!CL:0002057;2.14e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.93e-43!115;UBERON:0001049!6.06e-22!57;UBERON:0005068!6.06e-22!57;UBERON:0006241!6.06e-22!57;UBERON:0007135!6.06e-22!57;UBERON:0003080!6.06e-19!42;UBERON:0002780!1.02e-18!41;UBERON:0001890!1.02e-18!41;UBERON:0006240!1.02e-18!41;UBERON:0002616!2.81e-17!59;UBERON:0000955!1.60e-15!69;UBERON:0006238!1.60e-15!69;UBERON:0001893!7.62e-15!34;UBERON:0002020!1.18e-14!34;UBERON:0003528!1.18e-14!34;UBERON:0002791!3.37e-14!33;UBERON:0001869!1.35e-13!32;UBERON:0001017!1.37e-13!82;UBERON:0002390!1.49e-13!102;UBERON:0003061!1.49e-13!102;UBERON:0005743!3.81e-13!86;UBERON:0002619!3.77e-12!22;UBERON:0003075!5.70e-12!86;UBERON:0007284!5.70e-12!86;UBERON:0000073!1.35e-11!94;UBERON:0001016!1.35e-11!94;UBERON:0000153!1.45e-11!129;UBERON:0007811!1.45e-11!129;UBERON:0002371!1.96e-11!80;UBERON:0001950!3.79e-11!20;UBERON:0000033!1.82e-10!123;UBERON:0000062!1.90e-10!511;UBERON:0002193!2.13e-10!112;UBERON:0002346!3.24e-10!90;UBERON:0000956!7.67e-10!25;UBERON:0000203!7.67e-10!25;UBERON:0001474!9.40e-10!86;UBERON:0003056!1.43e-09!61;UBERON:0004121!6.73e-09!169;UBERON:0004765!5.35e-08!101;UBERON:0001434!5.35e-08!101;UBERON:0000924!6.84e-08!173;UBERON:0006601!6.84e-08!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.11e-13;41!UBERON:0001890;1.11e-13;41!UBERON:0001893;8.89e-13;34!UBERON:0003528;1.94e-12;34!UBERON:0002020;1.94e-12;34!UBERON:0007023;2.76e-12;114!UBERON:0002619;3.06e-12;22!UBERON:0001869;3.19e-12;32!UBERON:0002791;3.47e-12;32!UBERON:0000073;4.76e-12;53!UBERON:0002616;4.76e-12;53!UBERON:0001950;3.12e-11;20!UBERON:0000956;7.60e-10;25!UBERON:0000203;7.60e-10;25!UBERON:0000955;2.53e-07;68!UBERON:0001017;3.65e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.32e-42,114;UBERON:0001049,1.47e-21,56;UBERON:0005068,1.47e-21,56;UBERON:0006241,1.47e-21,56;UBERON:0007135,1.47e-21,56;UBERON:0000073,3.50e-20,53;UBERON:0002616,3.50e-20,53;UBERON:0002780,9.11e-19,41;UBERON:0001890,9.11e-19,41;UBERON:0003080,9.11e-19,41;UBERON:0006240,9.11e-19,41;UBERON:0000955,3.51e-15,68;UBERON:0006238,3.51e-15,68;UBERON:0001893,6.98e-15,34;UBERON:0003528,1.08e-14,34;UBERON:0002020,1.08e-14,34;UBERON:0002390,1.59e-14,98;UBERON:0003061,1.59e-14,98;UBERON:0001869,1.25e-13,32;UBERON:0002791,1.36e-13,32;UBERON:0001017,2.28e-13,81;UBERON:0002371,1.87e-12,76;UBERON:0003075,3.24e-12,82;UBERON:0007284,3.24e-12,82;UBERON:0002619,3.52e-12,22;UBERON:0001016,1.24e-11,89;UBERON:0010371,2.75e-11,104;UBERON:0001950,3.56e-11,20;UBERON:0002193,4.31e-11,108;UBERON:0001474,1.21e-10,82;UBERON:0002346,2.05e-10,86;UBERON:0003056,6.87e-10,61;UBERON:0000956,7.26e-10,25;UBERON:0000203,7.26e-10,25;UBERON:0002405,7.32e-10,93;UBERON:0011216,1.69e-09,223;UBERON:0004765,7.49e-09,90;UBERON:0001434,3.45e-08,100;UBERON:0004121,7.59e-08,171;UBERON:0000924,7.59e-08,171;UBERON:0006601,7.59e-08,171 | |||
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| ||
|short_description=p1@MFSD6 | |||
}} | }} |
Latest revision as of 03:21, 19 September 2015
Short description: | p1@MFSD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MFSD6_5end |
Coexpression cluster: | C2679_optic_pons_pituitary_ductus_seminal_paracentral_parietal |
Association with transcript: | 0bp_to_ENST00000392328, ENST00000417958, ENST00000432036, NM_017694, uc002urz.2_5end |
EntrezGene: | MFSD6 |
HGNC: | 24711 |
UniProt: | Q6ZSS7C9JAZ7C9J134 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.50e-19 | 120 |
leukocyte | 1.49e-17 | 136 |
nongranular leukocyte | 7.30e-16 | 115 |
granulocyte monocyte progenitor cell | 1.28e-14 | 67 |
myeloid lineage restricted progenitor cell | 8.87e-14 | 66 |
hematopoietic stem cell | 5.21e-12 | 168 |
macrophage dendritic cell progenitor | 9.33e-12 | 61 |
hematopoietic oligopotent progenitor cell | 2.17e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-11 | 161 |
defensive cell | 2.96e-11 | 48 |
phagocyte | 2.96e-11 | 48 |
monopoietic cell | 5.76e-11 | 59 |
monocyte | 5.76e-11 | 59 |
monoblast | 5.76e-11 | 59 |
promonocyte | 5.76e-11 | 59 |
myeloid leukocyte | 5.86e-11 | 72 |
hematopoietic cell | 1.06e-10 | 177 |
classical monocyte | 1.35e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-09 | 42 |
myeloid cell | 7.71e-07 | 108 |
common myeloid progenitor | 7.71e-07 | 108 |