FFCP PHASE1:Mm9::chr7:17200422..17200487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232906 | |EntrezGene=232906 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8 | |UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8 | ||
|association_with_transcript=-80bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end | |association_with_transcript=-80bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end | ||
|cluster_id=chr7:17200422..17200487,- | |||
|description=CAGE_peak_3_at_Grlf1_5end | |description=CAGE_peak_3_at_Grlf1_5end | ||
|id=chr7:17200422..17200487,- | |id=chr7:17200422..17200487,- | ||
|ontology_enrichment_celltype=CL:0000540!5.09e-16!33;CL:0000047!5.09e-16!33;CL:0000031!5.09e-16!33;CL:0000404!5.09e-16!33;CL:0000117!6.81e-14!23;CL:0000337!6.81e-14!23;CL:0000393!3.77e-12!39;CL:0000211!3.77e-12!39;CL:0002319!1.66e-11!43;CL:0000221!2.02e-11!44;CL:0000133!2.02e-11!44;CL:0000055!1.59e-08!50 | |ontology_enrichment_celltype=CL:0000540!5.09e-16!33;CL:0000047!5.09e-16!33;CL:0000031!5.09e-16!33;CL:0000404!5.09e-16!33;CL:0000117!6.81e-14!23;CL:0000337!6.81e-14!23;CL:0000393!3.77e-12!39;CL:0000211!3.77e-12!39;CL:0002319!1.66e-11!43;CL:0000221!2.02e-11!44;CL:0000133!2.02e-11!44;CL:0000055!1.59e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.05e-16,33;CL:0000047,5.05e-16,33;CL:0000031,5.05e-16,33;CL:0000404,5.05e-16,33;CL:0000117,6.77e-14,23;CL:0000337,6.77e-14,23;CL:0000393,3.75e-12,39;CL:0000211,3.75e-12,39;CL:0002319,1.65e-11,43;CL:0000221,2.01e-11,44;CL:0000133,2.01e-11,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-26!73;UBERON:0005743!1.10e-26!73;UBERON:0000073!1.30e-25!75;UBERON:0001016!1.30e-25!75;UBERON:0002346!1.24e-23!71;UBERON:0003075!1.24e-23!71;UBERON:0007284!1.24e-23!71;UBERON:0004121!1.16e-22!102;UBERON:0000924!1.16e-22!102;UBERON:0006601!1.16e-22!102;UBERON:0001049!7.42e-22!52;UBERON:0005068!7.42e-22!52;UBERON:0006241!7.42e-22!52;UBERON:0007135!7.42e-22!52;UBERON:0000955!1.74e-20!50;UBERON:0006238!1.74e-20!50;UBERON:0002616!5.69e-20!49;UBERON:0000033!5.92e-20!63;UBERON:0003056!2.74e-19!49;UBERON:0003080!3.94e-18!40;UBERON:0002780!7.21e-18!39;UBERON:0001890!7.21e-18!39;UBERON:0006240!7.21e-18!39;UBERON:0002020!7.52e-18!34;UBERON:0002791!4.40e-15!29;UBERON:0003528!4.40e-15!29;UBERON:0001893!4.40e-15!29;UBERON:0000153!1.34e-14!94;UBERON:0007811!1.20e-13!86;UBERON:0000025!9.76e-12!114;UBERON:0000956!6.46e-11!21;UBERON:0001869!6.46e-11!21;UBERON:0000203!6.46e-11!21;UBERON:0004111!4.20e-10!122;UBERON:0002619!5.73e-09!17;UBERON:0000468!3.95e-08!333;UBERON:0000479!7.40e-08!349;UBERON:0002021!8.22e-08!10;UBERON:0000411!8.22e-08!10;UBERON:0001950!8.22e-08!10 | |ontology_enrichment_uberon=UBERON:0001017!1.10e-26!73;UBERON:0005743!1.10e-26!73;UBERON:0000073!1.30e-25!75;UBERON:0001016!1.30e-25!75;UBERON:0002346!1.24e-23!71;UBERON:0003075!1.24e-23!71;UBERON:0007284!1.24e-23!71;UBERON:0004121!1.16e-22!102;UBERON:0000924!1.16e-22!102;UBERON:0006601!1.16e-22!102;UBERON:0001049!7.42e-22!52;UBERON:0005068!7.42e-22!52;UBERON:0006241!7.42e-22!52;UBERON:0007135!7.42e-22!52;UBERON:0000955!1.74e-20!50;UBERON:0006238!1.74e-20!50;UBERON:0002616!5.69e-20!49;UBERON:0000033!5.92e-20!63;UBERON:0003056!2.74e-19!49;UBERON:0003080!3.94e-18!40;UBERON:0002780!7.21e-18!39;UBERON:0001890!7.21e-18!39;UBERON:0006240!7.21e-18!39;UBERON:0002020!7.52e-18!34;UBERON:0002791!4.40e-15!29;UBERON:0003528!4.40e-15!29;UBERON:0001893!4.40e-15!29;UBERON:0000153!1.34e-14!94;UBERON:0007811!1.20e-13!86;UBERON:0000025!9.76e-12!114;UBERON:0000956!6.46e-11!21;UBERON:0001869!6.46e-11!21;UBERON:0000203!6.46e-11!21;UBERON:0004111!4.20e-10!122;UBERON:0002619!5.73e-09!17;UBERON:0000468!3.95e-08!333;UBERON:0000479!7.40e-08!349;UBERON:0002021!8.22e-08!10;UBERON:0000411!8.22e-08!10;UBERON:0001950!8.22e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.09e-26,73;UBERON:0001016,1.28e-25,75;UBERON:0002346,1.63e-24,64;UBERON:0003075,1.63e-24,64;UBERON:0007284,1.63e-24,64;UBERON:0000073,6.64e-23,54;UBERON:0004121,6.94e-23,95;UBERON:0000924,6.94e-23,95;UBERON:0006601,6.94e-23,95;UBERON:0010371,6.66e-22,73;UBERON:0001049,7.34e-22,52;UBERON:0005068,7.34e-22,52;UBERON:0006241,7.34e-22,52;UBERON:0007135,7.34e-22,52;UBERON:0010314,2.03e-20,92;UBERON:0003056,2.71e-19,49;UBERON:0000955,4.97e-19,47;UBERON:0006238,4.97e-19,47;UBERON:0002616,1.59e-18,46;UBERON:0003080,3.91e-18,40;UBERON:0002780,7.15e-18,39;UBERON:0001890,7.15e-18,39;UBERON:0006240,7.15e-18,39;UBERON:0002020,7.45e-18,34;UBERON:0003528,4.37e-15,29;UBERON:0002791,4.37e-15,29;UBERON:0001893,4.37e-15,29;UBERON:0000025,9.71e-12,114;UBERON:0000956,6.42e-11,21;UBERON:0001869,6.42e-11,21;UBERON:0000203,6.42e-11,21;UBERON:0004111,4.18e-10,122;UBERON:0002619,5.71e-09,17;UBERON:0000922,3.54e-08,320;UBERON:0002021,8.19e-08,10;UBERON:0000411,8.19e-08,10;UBERON:0001950,8.19e-08,10;UBERON:0000479,9.29e-08,349 | |||
|phase1_expression=6.08565618998217,0.348975407639361,0.454999239389536,0,0,1.51091344720701,2.10251376535973,4.51931632045517,2.67498572088167,3.04283884218592,3.5955773327356,4.06838010876216,3.42401459862411,3.93391810885488,1.99865857089398,1.61980213911861,0,2.20823515750766,2.19383093769182,3.81950686618227,4.16712121740242,2.87943758482567,0.783599367416806,0.639969691173627,0.45881856213434,0,0.430761996159075,0.646413698057667,0.380046838912748,0.252030129759931,1.10865255327652,5.71527606113668,9.22597181376855,0,2.59966457776147,1.66234645358492,3.67504841272264,0,0.7813353445238,0.523523743973798,0,0,0,5.28766635497425,4.46058497365864,4.9557623083654,8.60630478782843,4.14247797122848,3.95435128922049,4.27745777963423,3.49966054063406,2.87505128729943,2.51673909086605,3.62681071005672,7.05796978199174,1.28629718017973,3.72493471920384,1.54701627683233,16.1853168687678,18.5146842745212,21.5502677192101,2.71075625655306,3.55717918444456,2.2497492932035,4.94433181283487,2.8419204597844,3.59520132622086,4.99483796918021,10.0578923939223,14.0406175864958,11.9885227970288,13.4255962669788,8.61387309711293,16.4137670948038,10.6388472830242,28.4957823849107,8.8092704799511,11.7472351038373,10.5988507946808,15.0350368012421,12.0763689555181,20.8365348222704,13.6799669510677,11.8180148106653,13.4462458043593,19.1508580557884,12.8134512719193,13.7935589910722,3.25622631332691,4.45872204630035,2.6087803983151,2.58127163094416,2.719885334831,3.77792234146472,7.79731700937203,8.51251085484938,2.52799956237153,2.89731548382698,1.29893002301434,3.88673531961374,5.63373679106722,5.13305909657271,2.54805239706646,7.11066703153331,4.5463118612355,3.29367825117628,2.02209778005913,2.39786147410026,2.58937883647172,6.23456984072264,6.41895709034703,4.56698217468212,4.38169444786511,5.42601505989441,7.2904998424137,5.02666365318702,1.48316980640624,5.35017620603673,1.76922110389975,5.01477234836968,3.97514733228708,0.969750506270444,1.86391761218122,5.27005434620785,6.0739544975902,2.04365644166873,2.75574786363617,1.19980546198682,1.14363204365758,8.08869452786043,6.8625090422794,22.4921290282027,9.90798625095976,14.0643501531682,8.10373373782284,10.058958310201,6.21220119486929,4.22983700074316,6.31806896084187,2.31486041475121,9.75903322220278,5.74755261083682,8.10279584124071,8.43946979880004,9.59314638033723,7.94305065766069,9.7449793542118,6.72628763921441,8.191583731448,11.9136830505726,8.79755620819744,7.45265490253754,7.50727572909114,5.92028683087683,3.90986059175093,10.1507476077432,1.40442637462647,1.28673953557358,1.70498099637356,4.76389276831654,3.75241695969754,5.94204802821349,7.57583153872673,8.65762619688577,6.78775296704464,6.74348439776183,8.31647544338819,8.05680862333469,6.58239399653922,4.43252153013557,5.75588547775576,4.5321996101853,4.39100230582101,4.2946054003319,9.88362758251398,11.8340304236177,0.330418782983798,1.58670339998127,7.46508876873319,8.59275685883622,4.63922860759536,4.63872106633688,4.00280478920767,2.85338439168839,1.89811624617805,2.30578536613615,1.75934646160189,3.58121649674071,2.14460495831032,4.49409704327111,1.72910439899755,0.995706366271836,5.31070122668629,6.62641373136427,9.01661885384643,5.7022371796688,6.40043207653165,6.59276706968994,5.43834219268613,3.09981310757165,3.29697328466887,2.59134044235781,2.37162101669719,2.00214126859313,3.14494392181125,1.79889689907883,2.23146133527353,1.68824011826692,3.05551022137704,5.4662266115654,3.56697498905078,4.3929826110093,11.5014565221884,3.72140947668503,4.68056509671841,5.80931419278357,2.51156378930677,3.37710464954357,4.61882975416512,5.30575952957357,5.0519142697028,6.62005834523234,4.45911471748154,7.03526281255626,8.09348379012447,8.39074685788535,5.35959489961049,5.09368786192182,7.97273843287435,4.26044618260919,5.00786447411097,3.32692834737477,1.50791283939272,5.98296252200581,0,4.13905119457099,10.7568895291821,9.02529986759964,2.95082901678016,3.02965112645248,7.2566890465739,8.58965237452605,14.8642144435631,8.84184552424442,7.12955757063661,11.0399847007645,6.07216052512342,8.18316402151673,7.90575555893047,10.6036034419196,6.10342366395555,7.65682095769198,8.1443479676788,6.92874516484649,1.32745138339963,6.06951590387454,6.04647113929502,3.58349651536206,2.36241514304618,6.14870295887855,2.58428293168221,1.81766864738753,3.20847640546249,3.47640433729398,3.16255825724996,4.12542172992747,7.14923172082955,5.76195500900193,6.98536892426874,8.14480733120051,7.27094957933322,13.5560301377574,10.6956863391379,13.0919928119278,1.64270195644597,1.90648863777438,3.74898276693435,3.95727007059552,8.55761461488299,6.03129249281559,4.8942661041286,4.26766339337159,1.7488850197791,9.45669040253599,2.05045056957423,5.98521917093345,4.07427960213366,1.69531611304222,1.77702496037333,2.28778173206523,1.35982743995084,1.6794174278839,2.21119958087078,0,7.43389584915668,5.08298667817122,6.37231510848627,5.85447228840512,4.14888871117737,2.96701562046606,5.2898211664215,3.14107130380836,2.46268449254406,1.8640179392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| ||
|short_description=p3@Grlf1 | |short_description=p3@Grlf1 | ||
}} | }} |
Latest revision as of 07:09, 26 September 2015
Short description: | p3@Grlf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Grlf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -80bp_to_ENSMUST00000075845, NM_172739, uc009fhw.1_5end |
EntrezGene: | Grlf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.05e-16 | 33 |
neuronal stem cell | 5.05e-16 | 33 |
neuroblast | 5.05e-16 | 33 |
electrically signaling cell | 5.05e-16 | 33 |
CNS neuron (sensu Vertebrata) | 6.77e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.77e-14 | 23 |
electrically responsive cell | 3.75e-12 | 39 |
electrically active cell | 3.75e-12 | 39 |
neural cell | 1.65e-11 | 43 |
ectodermal cell | 2.01e-11 | 44 |
neurectodermal cell | 2.01e-11 | 44 |