FFCP PHASE1:Mm9::chr15:79489626..79489697,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73739 | |EntrezGene=73739 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1511 | |MCL_coexpression_id=1511 | ||
|TSSclassifier=NA | |||
|UniProt=Q9D1C2 | |UniProt=Q9D1C2 | ||
|association_with_transcript=0bp_to_ENSMUST00000023064,NM_028634,uc007wuc.1_5end | |association_with_transcript=0bp_to_ENSMUST00000023064,NM_028634,uc007wuc.1_5end | ||
|cluster_id=chr15:79489626..79489697,+ | |||
|description=CAGE_peak_1_at_Cby1_5end | |description=CAGE_peak_1_at_Cby1_5end | ||
|id=chr15:79489626..79489697,+ | |id=chr15:79489626..79489697,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.78e-16!44;CL:0000133!1.78e-16!44;CL:0002319!5.69e-16!43;CL:0000055!3.55e-15!50;CL:0000117!3.81e-12!23;CL:0000337!3.81e-12!23;CL:0000540!7.42e-12!33;CL:0000047!7.42e-12!33;CL:0000031!7.42e-12!33;CL:0000404!7.42e-12!33;CL:0000393!1.31e-11!39;CL:0000211!1.31e-11!39 | |ontology_enrichment_celltype=CL:0000221!1.78e-16!44;CL:0000133!1.78e-16!44;CL:0002319!5.69e-16!43;CL:0000055!3.55e-15!50;CL:0000117!3.81e-12!23;CL:0000337!3.81e-12!23;CL:0000540!7.42e-12!33;CL:0000047!7.42e-12!33;CL:0000031!7.42e-12!33;CL:0000404!7.42e-12!33;CL:0000393!1.31e-11!39;CL:0000211!1.31e-11!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.78e-16,44;CL:0000133,1.78e-16,44;CL:0002319,5.69e-16,43;CL:0000117,3.81e-12,23;CL:0000337,3.81e-12,23;CL:0000540,7.42e-12,33;CL:0000047,7.42e-12,33;CL:0000031,7.42e-12,33;CL:0000404,7.42e-12,33;CL:0000393,1.31e-11,39;CL:0000211,1.31e-11,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.54e-31!73;UBERON:0005743!1.54e-31!73;UBERON:0000073!1.14e-30!75;UBERON:0001016!1.14e-30!75;UBERON:0000033!1.97e-25!63;UBERON:0001049!9.03e-25!52;UBERON:0005068!9.03e-25!52;UBERON:0006241!9.03e-25!52;UBERON:0007135!9.03e-25!52;UBERON:0002346!2.84e-24!71;UBERON:0003075!2.84e-24!71;UBERON:0007284!2.84e-24!71;UBERON:0000955!1.64e-23!50;UBERON:0006238!1.64e-23!50;UBERON:0004121!1.73e-23!102;UBERON:0000924!1.73e-23!102;UBERON:0006601!1.73e-23!102;UBERON:0002616!3.89e-23!49;UBERON:0003056!7.46e-22!49;UBERON:0003080!1.05e-19!40;UBERON:0002780!1.61e-19!39;UBERON:0001890!1.61e-19!39;UBERON:0006240!1.61e-19!39;UBERON:0002020!8.36e-19!34;UBERON:0002791!2.48e-16!29;UBERON:0003528!2.48e-16!29;UBERON:0001893!2.48e-16!29;UBERON:0007811!6.74e-16!86;UBERON:0000153!1.60e-14!94;UBERON:0000956!2.37e-12!21;UBERON:0001869!2.37e-12!21;UBERON:0000203!2.37e-12!21;UBERON:0000025!5.52e-11!114;UBERON:0002619!1.54e-10!17;UBERON:0004111!4.47e-10!122 | |ontology_enrichment_uberon=UBERON:0001017!1.54e-31!73;UBERON:0005743!1.54e-31!73;UBERON:0000073!1.14e-30!75;UBERON:0001016!1.14e-30!75;UBERON:0000033!1.97e-25!63;UBERON:0001049!9.03e-25!52;UBERON:0005068!9.03e-25!52;UBERON:0006241!9.03e-25!52;UBERON:0007135!9.03e-25!52;UBERON:0002346!2.84e-24!71;UBERON:0003075!2.84e-24!71;UBERON:0007284!2.84e-24!71;UBERON:0000955!1.64e-23!50;UBERON:0006238!1.64e-23!50;UBERON:0004121!1.73e-23!102;UBERON:0000924!1.73e-23!102;UBERON:0006601!1.73e-23!102;UBERON:0002616!3.89e-23!49;UBERON:0003056!7.46e-22!49;UBERON:0003080!1.05e-19!40;UBERON:0002780!1.61e-19!39;UBERON:0001890!1.61e-19!39;UBERON:0006240!1.61e-19!39;UBERON:0002020!8.36e-19!34;UBERON:0002791!2.48e-16!29;UBERON:0003528!2.48e-16!29;UBERON:0001893!2.48e-16!29;UBERON:0007811!6.74e-16!86;UBERON:0000153!1.60e-14!94;UBERON:0000956!2.37e-12!21;UBERON:0001869!2.37e-12!21;UBERON:0000203!2.37e-12!21;UBERON:0000025!5.52e-11!114;UBERON:0002619!1.54e-10!17;UBERON:0004111!4.47e-10!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.54e-31,73;UBERON:0001016,1.14e-30,75;UBERON:0002346,1.31e-27,64;UBERON:0003075,1.31e-27,64;UBERON:0007284,1.31e-27,64;UBERON:0010314,3.70e-26,92;UBERON:0000073,7.55e-26,54;UBERON:0004121,1.03e-25,95;UBERON:0000924,1.03e-25,95;UBERON:0006601,1.03e-25,95;UBERON:0001049,9.03e-25,52;UBERON:0005068,9.03e-25,52;UBERON:0006241,9.03e-25,52;UBERON:0007135,9.03e-25,52;UBERON:0010371,1.83e-22,73;UBERON:0000955,3.23e-22,47;UBERON:0006238,3.23e-22,47;UBERON:0003056,7.46e-22,49;UBERON:0002616,7.54e-22,46;UBERON:0003080,1.05e-19,40;UBERON:0002780,1.61e-19,39;UBERON:0001890,1.61e-19,39;UBERON:0006240,1.61e-19,39;UBERON:0002020,8.36e-19,34;UBERON:0003528,2.48e-16,29;UBERON:0002791,2.48e-16,29;UBERON:0001893,2.48e-16,29;UBERON:0000956,2.37e-12,21;UBERON:0001869,2.37e-12,21;UBERON:0000203,2.37e-12,21;UBERON:0000025,5.58e-11,114;UBERON:0002619,1.54e-10,17;UBERON:0004111,4.51e-10,122 | |||
|phase1_expression=41.7988490943512,4.53668029931169,2.72999543633722,5.74682001482977,6.01074875935617,9.06548068324205,12.3814699515629,8.78038599402719,0.140788722151667,0,0.34243593645101,0.8774937489487,4.62241970814255,5.76974655965383,11.9919514253639,14.7806945194573,9.79386629379405,9.30613387806801,8.5010948835558,8.06340338416257,34.102359350579,23.6312463858107,24.0303806007821,10.8794847499517,11.0116454912242,5.7423196411502,6.03066794622705,6.67960821326256,15.5819203954227,10.0812051903972,12.8603696180077,9.52546010189447,9.22597181376855,0,18.7753552838328,21.4442692512455,17.150225926039,23.4377713212668,18.7520482685712,37.1701858221397,21.1763335691165,23.2235464885872,24.7610280045888,44.8192671993055,40.1452647629278,30.4687608588391,36.7723931843578,74.5646034821127,56.2396627800248,51.7183531537594,46.4754919796204,70.4387565388361,4.86569557567435,4.35217285206807,4.36921938885203,14.1492689819771,18.6246735960192,14.9544906760458,41.8795073979367,44.9642332381228,38.6637156138769,29.1406297579454,29.3467282716676,16.1981949110652,15.8218618010716,18.4724829885986,47.3368174619079,90.2913017505653,37.120881206435,43.7419240194678,35.5449184683836,48.5606673486466,46.6032621407905,47.5264300954022,43.0346164871881,39.5264078242309,40.7428759697738,31.5387725070414,32.2573719838111,40.2253177577091,44.2800195035663,41.6730696445408,38.5272538621906,39.3933827022176,32.0876320331301,32.4091444021034,36.020035242173,34.8566963693312,13.9336195733059,22.4447533517153,6.66688324013859,16.3480536626463,0.679971333707751,9.71465744948071,8.4470934268197,9.40856462904405,17.9768857768642,35.6199374188141,37.1493986582102,30.0338638333789,39.1544706979172,26.9485602570067,12.7402619853323,7.11066703153331,17.9687564039308,21.7889484308585,15.6712577954583,12.2176751299394,5.69663344023778,12.3206975423805,21.1652098654686,23.1393763517227,15.912469310668,21.1011696773672,12.346814249249,15.9596570988688,5.19109432242185,9.83275627055399,15.9229899350977,16.0149181447935,19.8757366614354,16.0008833534623,11.1835056730873,24.8863677459815,25.761944938055,13.2837668708468,16.4146720573111,17.3971791988088,22.9997111002247,27.7112682898922,34.7700458142156,59.8114716057235,37.1984045211472,39.3801804288709,29.298114282898,41.2092808192104,18.4329248569072,13.43595282589,17.1851475734899,20.412860020988,30.31806321031,36.0946303960553,27.0093194708024,33.6071743773645,25.8538696775046,31.6440889103579,32.6082001467856,26.6464471861186,23.281343236747,15.5066985737612,17.5951124163949,24.769117764316,23.0779216857246,15.6713474934975,20.5782136407943,16.5198441459349,23.87524836865,19.3010930336036,20.4597719564827,17.8128164380532,23.6871320580907,26.1089989118472,15.1516630774535,34.4337405557957,38.8753124476193,36.9728972153149,28.9735273511589,24.2871912123713,28.1397343352052,29.385976070158,25.293468578307,24.8539978623065,28.7610651031276,23.3519168643047,38.9036404843635,51.0406877401251,7.26921322564356,8.99131926656051,20.9022485524529,17.6499870613933,10.1805294444454,13.3111126251406,11.1189021922435,15.4082757151173,8.0669940462567,13.8347121968169,16.8394589896181,13.7279965708394,17.7417319278399,8.98819408654222,13.8328351919804,11.5501938487533,32.433211062977,22.6212054967263,18.0332377076929,22.6052973908299,21.1408211012712,15.4298803758701,18.6547784516559,27.8983179681448,20.2528358915373,19.1265604078791,10.3758419480502,10.8449318715461,14.1522476481506,8.09503604585473,12.5773275260872,9.16473207059184,8.91190481234969,10.0693648107784,8.59316701907687,10.4333337011471,8.62609239164127,14.5134969590716,12.1694692514679,7.82994521636046,14.7105879087968,10.6137574699941,18.8448253969937,24.254900706622,18.2520773615069,25.8012530378286,31.9178737672363,25.9634699034814,22.1380586023993,17.7571619550597,22.2265553189729,22.589398344175,23.4398509926506,24.0879072632135,20.7221978239075,20.8294644357377,7.53956419696361,8.15858525728064,10.3270497333998,6.34654516500885,30.1835109177049,33.8741774251467,16.8852993737976,18.4303776859192,29.9732808445444,21.4741309363151,26.0662311256687,21.0292542198246,21.3886727119098,19.5322806244294,23.4790206971439,23.6727244908163,17.392662229647,32.1321316421807,16.4650498841592,24.5730533060812,17.4289046508326,17.6518031580613,9.2921596837974,21.6074766177933,24.1858845571801,17.1630622577867,14.4697927511579,13.5271465095328,10.5955600198971,16.7225515559653,16.7553767840819,11.0612865277536,15.8127912862498,11.3449097573006,28.2564872775644,31.1505692674167,46.9572022131399,28.935499729265,29.793159251902,29.2524860867396,33.4034511822306,28.9241701658869,11.0295702789944,9.53244318887191,17.421743446342,10.7176064411962,12.1098320021929,11.8213332859185,14.8021706563889,16.5782308742512,13.1166376483433,28.9263471136395,13.1570578214347,18.7812049846532,18.3342582096015,16.5764242164128,20.2307457027117,16.9295848172827,15.9779724194224,18.7534946113702,12.0233977209849,14.3200592702267,18.0311516341247,17.485474172909,23.4371589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|phase1_expression=41.7988490943512,4.53668029931169,2.72999543633722,5.74682001482977,6.01074875935617,9.06548068324205,12.3814699515629,8.78038599402719,0.140788722151667,0,0.34243593645101,0.8774937489487,4.62241970814255,5.76974655965383,11.9919514253639,14.7806945194573,9.79386629379405,9.30613387806801,8.5010948835558,8.06340338416257,34.102359350579,23.6312463858107,24.0303806007821,10.8794847499517,11.0116454912242,5.7423196411502,6.03066794622705,6.67960821326256,15.5819203954227,10.0812051903972,12.8603696180077,9.52546010189447,9.22597181376855,0,18.7753552838328,21.4442692512455,17.150225926039,23.4377713212668,18.7520482685712,37.1701858221397,21.1763335691165,23.2235464885872,24.7610280045888,44.8192671993055,40.1452647629278,30.4687608588391,36.7723931843578,74.5646034821127,56.2396627800248,51.7183531537594,46.4754919796204,70.4387565388361,4.86569557567435,4.35217285206807,4.36921938885203,14.1492689819771,18.6246735960192,14.9544906760458,41.8795073979367,44.9642332381228,38.6637156138769,29.1406297579454,29.3467282716676,16.1981949110652,15.8218618010716,18.4724829885986,47.3368174619079,90.2913017505653,37.120881206435,43.7419240194678,35.5449184683836,48.5606673486466,46.6032621407905,47.5264300954022,43.0346164871881,39.5264078242309,40.7428759697738,31.5387725070414,32.2573719838111,40.2253177577091,44.2800195035663,41.6730696445408,38.5272538621906,39.3933827022176,32.0876320331301,32.4091444021034,36.020035242173,34.8566963693312,13.9336195733059,22.4447533517153,6.66688324013859,16.3480536626463,0.679971333707751,9.71465744948071,8.4470934268197,9.40856462904405,17.9768857768642,35.6199374188141,37.1493986582102,30.0338638333789,39.1544706979172,26.9485602570067,12.7402619853323,7.11066703153331,17.9687564039308,21.7889484308585,15.6712577954583,12.2176751299394,5.69663344023778,12.3206975423805,21.1652098654686,23.1393763517227,15.912469310668,21.1011696773672,12.346814249249,15.9596570988688,5.19109432242185,9.83275627055399,15.9229899350977,16.0149181447935,19.8757366614354,16.0008833534623,11.1835056730873,24.8863677459815,25.761944938055,13.2837668708468,16.4146720573111,17.3971791988088,22.9997111002247,27.7112682898922,34.7700458142156,59.8114716057235,37.1984045211472,39.3801804288709,29.298114282898,41.2092808192104,18.4329248569072,13.43595282589,17.1851475734899,20.412860020988,30.31806321031,36.0946303960553,27.0093194708024,33.6071743773645,25.8538696775046,31.6440889103579,32.6082001467856,26.6464471861186,23.281343236747,15.5066985737612,17.5951124163949,24.769117764316,23.0779216857246,15.6713474934975,20.5782136407943,16.5198441459349,23.87524836865,19.3010930336036,20.4597719564827,17.8128164380532,23.6871320580907,26.1089989118472,15.1516630774535,34.4337405557957,38.8753124476193,36.9728972153149,28.9735273511589,24.2871912123713,28.1397343352052,29.385976070158,25.293468578307,24.8539978623065,28.7610651031276,23.3519168643047,38.9036404843635,51.0406877401251,7.26921322564356,8.99131926656051,20.9022485524529,17.6499870613933,10.1805294444454,13.3111126251406,11.1189021922435,15.4082757151173,8.0669940462567,13.8347121968169,16.8394589896181,13.7279965708394,17.7417319278399,8.98819408654222,13.8328351919804,11.5501938487533,32.433211062977,22.6212054967263,18.0332377076929,22.6052973908299,21.1408211012712,15.4298803758701,18.6547784516559,27.8983179681448,20.2528358915373,19.1265604078791,10.3758419480502,10.8449318715461,14.1522476481506,8.09503604585473,12.5773275260872,9.16473207059184,8.91190481234969,10.0693648107784,8.59316701907687,10.4333337011471,8.62609239164127,14.5134969590716,12.1694692514679,7.82994521636046,14.7105879087968,10.6137574699941,18.8448253969937,24.254900706622,18.2520773615069,25.8012530378286,31.9178737672363,25.9634699034814,22.1380586023993,17.7571619550597,22.2265553189729,22.589398344175,23.4398509926506,24.0879072632135,20.7221978239075,20.8294644357377,7.53956419696361,8.15858525728064,10.3270497333998,6.34654516500885,30.1835109177049,33.8741774251467,16.8852993737976,18.4303776859192,29.9732808445444,21.4741309363151,26.0662311256687,21.0292542198246,21.3886727119098,19.5322806244294,23.4790206971439,23.6727244908163,17.392662229647,32.1321316421807,16.4650498841592,24.5730533060812,17.4289046508326,17.6518031580613,9.2921596837974,21.6074766177933,24.1858845571801,17.1630622577867,14.4697927511579,13.5271465095328,10.5955600198971,16.7225515559653,16.7553767840819,11.0612865277536,15.8127912862498,11.3449097573006,28.2564872775644,31.1505692674167,46.9572022131399,28.935499729265,29.793159251902,29.2524860867396,33.4034511822306,28.9241701658869,11.0295702789944,9.53244318887191,17.421743446342,10.7176064411962,12.1098320021929,11.8213332859185,14.8021706563889,16.5782308742512,13.1166376483433,28.9263471136395,13.1570578214347,18.7812049846532,18.3342582096015,16.5764242164128,20.2307457027117,16.9295848172827,15.9779724194224,18.7534946113702,12.0233977209849,14.3200592702267,18.0311516341247,17.485474172909,23.4371589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| ||
|short_description=p1@Cby1 | |short_description=p1@Cby1 | ||
}} | }} |
Latest revision as of 03:06, 27 September 2015
Short description: | p1@Cby1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cby1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1511 |
Association with transcript: | 0bp_to_ENSMUST00000023064, NM_028634, uc007wuc.1_5end |
EntrezGene: | Cby1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.78e-16 | 44 |
neurectodermal cell | 1.78e-16 | 44 |
neural cell | 5.69e-16 | 43 |
CNS neuron (sensu Vertebrata) | 3.81e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.81e-12 | 23 |
neuron | 7.42e-12 | 33 |
neuronal stem cell | 7.42e-12 | 33 |
neuroblast | 7.42e-12 | 33 |
electrically signaling cell | 7.42e-12 | 33 |
electrically responsive cell | 1.31e-11 | 39 |
electrically active cell | 1.31e-11 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.54e-31 | 73 |
nervous system | 1.14e-30 | 75 |
neurectoderm | 1.31e-27 | 64 |
neural plate | 1.31e-27 | 64 |
presumptive neural plate | 1.31e-27 | 64 |
structure with developmental contribution from neural crest | 3.70e-26 | 92 |
regional part of nervous system | 7.55e-26 | 54 |
ectoderm-derived structure | 1.03e-25 | 95 |
ectoderm | 1.03e-25 | 95 |
presumptive ectoderm | 1.03e-25 | 95 |
neural tube | 9.03e-25 | 52 |
neural rod | 9.03e-25 | 52 |
future spinal cord | 9.03e-25 | 52 |
neural keel | 9.03e-25 | 52 |
ecto-epithelium | 1.83e-22 | 73 |
brain | 3.23e-22 | 47 |
future brain | 3.23e-22 | 47 |
pre-chordal neural plate | 7.46e-22 | 49 |
regional part of brain | 7.54e-22 | 46 |
anterior neural tube | 1.05e-19 | 40 |
regional part of forebrain | 1.61e-19 | 39 |
forebrain | 1.61e-19 | 39 |
future forebrain | 1.61e-19 | 39 |
gray matter | 8.36e-19 | 34 |
brain grey matter | 2.48e-16 | 29 |
regional part of telencephalon | 2.48e-16 | 29 |
telencephalon | 2.48e-16 | 29 |
cerebral cortex | 2.37e-12 | 21 |
cerebral hemisphere | 2.37e-12 | 21 |
pallium | 2.37e-12 | 21 |
tube | 5.58e-11 | 114 |
regional part of cerebral cortex | 1.54e-10 | 17 |
anatomical conduit | 4.51e-10 | 122 |