FFCP PHASE1:Mm9::chr8:37311150..37311161,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |MCL_coexpression_id=6 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:37311150..37311161,- | |||
|description=CAGE_peak_at_chr8:37311150..37311161,- | |description=CAGE_peak_at_chr8:37311150..37311161,- | ||
|id=chr8:37311150..37311161,- | |id=chr8:37311150..37311161,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.53e-12,1;CL:0002078,5.53e-12,1;CL:0000115,5.53e-12,1;CL:0002262,5.53e-12,1;CL:1000398,5.53e-12,1;CL:0000355,1.19e-11,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.18e-33,3;DOID:4045,2.18e-33,3;DOID:0050686,4.12e-17,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.53e-12,1;UBERON:0001281,5.53e-12,1;UBERON:0000353,5.53e-12,1;UBERON:0003497,5.53e-12,1;UBERON:0003909,5.53e-12,1;UBERON:0003928,5.53e-12,1;UBERON:0003835,5.53e-12,1;UBERON:0003513,5.53e-12,1;UBERON:0001280,5.53e-12,1;UBERON:0004647,5.53e-12,1;UBERON:0002294,5.53e-12,1;UBERON:0001173,5.53e-12,1;UBERON:0004912,5.53e-12,1;UBERON:0005171,5.53e-12,1;UBERON:0001134,1.19e-11,9;UBERON:0002036,1.19e-11,9;UBERON:0002385,1.19e-11,9;UBERON:0000486,1.19e-11,9;UBERON:0007503,1.19e-11,9;UBERON:0001015,1.19e-11,9;UBERON:0002329,1.19e-11,9;UBERON:0003082,1.19e-11,9;UBERON:0003059,1.19e-11,9;UBERON:0007282,1.19e-11,9;UBERON:0004290,1.19e-11,9;UBERON:0009618,1.19e-11,9;UBERON:0000383,1.50e-10,10;UBERON:0007524,1.19e-09,11;UBERON:0003077,1.19e-09,11;UBERON:0007285,1.19e-09,11 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0,0,0,0.140788722151667,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0.42438965179803,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0.866554859253824,0.166234645358492,0.204169356262369,18.8339233831608,14.8453715459522,12.0410461113974,53.5290654108223,25.2726829434625,12.1377588257788,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,1.44932244350839,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0.722996784599558,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.679913719975421,1.11961161858926,0.552799895217695,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0,0,0,0.140788722151667,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0.42438965179803,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0.866554859253824,0.166234645358492,0.204169356262369,18.8339233831608,14.8453715459522,12.0410461113974,53.5290654108223,25.2726829434625,12.1377588257788,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,1.44932244350839,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0.722996784599558,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.679913719975421,1.11961161858926,0.552799895217695,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:37311150..37311161,- | |short_description=p@chr8:37311150..37311161,- | ||
}} | }} |
Latest revision as of 09:29, 6 August 2015
Short description: | p@chr8:37311150..37311161, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:37311150..37311161, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.53e-12 | 1 |
meso-epithelial cell | 5.53e-12 | 1 |
endothelial cell | 5.53e-12 | 1 |
endothelial cell of sinusoid | 5.53e-12 | 1 |
endothelial cell of hepatic sinusoid | 5.53e-12 | 1 |
multi-potent skeletal muscle stem cell | 1.19e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.53e-12 | 1 |
hepatic sinusoid | 5.53e-12 | 1 |
parenchyma | 5.53e-12 | 1 |
abdomen blood vessel | 5.53e-12 | 1 |
sinusoid | 5.53e-12 | 1 |
digestive system duct | 5.53e-12 | 1 |
abdominal segment blood vessel | 5.53e-12 | 1 |
trunk blood vessel | 5.53e-12 | 1 |
liver parenchyma | 5.53e-12 | 1 |
liver lobule | 5.53e-12 | 1 |
biliary system | 5.53e-12 | 1 |
biliary tree | 5.53e-12 | 1 |
biliary bud | 5.53e-12 | 1 |
hepatic duct | 5.53e-12 | 1 |
skeletal muscle tissue | 1.19e-11 | 9 |
striated muscle tissue | 1.19e-11 | 9 |
muscle tissue | 1.19e-11 | 9 |
multilaminar epithelium | 1.19e-11 | 9 |
epithelial vesicle | 1.19e-11 | 9 |
musculature | 1.19e-11 | 9 |
somite | 1.19e-11 | 9 |
myotome | 1.19e-11 | 9 |
presomitic mesoderm | 1.19e-11 | 9 |
presumptive segmental plate | 1.19e-11 | 9 |
dermomyotome | 1.19e-11 | 9 |
trunk paraxial mesoderm | 1.19e-11 | 9 |
musculature of body | 1.50e-10 | 10 |
dense mesenchyme tissue | 1.19e-09 | 11 |
paraxial mesoderm | 1.19e-09 | 11 |
presumptive paraxial mesoderm | 1.19e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.18e-33 | 3 |
muscle cancer | 2.18e-33 | 3 |
organ system cancer | 4.12e-17 | 6 |