FFCP PHASE1:Mm9::chr16:4719148..4719164,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67824 | |EntrezGene=67824 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt=G5E8S7 | |UniProt=G5E8S7 | ||
|association_with_transcript=0bp_to_ENSMUST00000115851_5end | |association_with_transcript=0bp_to_ENSMUST00000115851_5end | ||
|cluster_id=chr16:4719148..4719164,- | |||
|description=CAGE_peak_3_at_Nmral1_5end | |description=CAGE_peak_3_at_Nmral1_5end | ||
|id=chr16:4719148..4719164,- | |id=chr16:4719148..4719164,- | ||
|ontology_enrichment_celltype=CL:0000117!1.85e-12!23;CL:0000337!1.85e-12!23;CL:0000540!4.03e-09!33;CL:0000047!4.03e-09!33;CL:0000031!4.03e-09!33;CL:0000404!4.03e-09!33;CL:0000393!5.42e-09!39;CL:0000211!5.42e-09!39 | |ontology_enrichment_celltype=CL:0000117!1.85e-12!23;CL:0000337!1.85e-12!23;CL:0000540!4.03e-09!33;CL:0000047!4.03e-09!33;CL:0000031!4.03e-09!33;CL:0000404!4.03e-09!33;CL:0000393!5.42e-09!39;CL:0000211!5.42e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-14,23;CL:0000337,4.92e-14,23;CL:0000540,1.98e-10,33;CL:0000047,1.98e-10,33;CL:0000031,1.98e-10,33;CL:0000404,1.98e-10,33;CL:0000393,3.81e-10,39;CL:0000211,3.81e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.39e-15!34;UBERON:0001049!3.08e-14!52;UBERON:0005068!3.08e-14!52;UBERON:0006241!3.08e-14!52;UBERON:0007135!3.08e-14!52;UBERON:0001017!6.59e-14!73;UBERON:0005743!6.59e-14!73;UBERON:0003056!7.26e-14!49;UBERON:0003080!9.08e-14!40;UBERON:0002780!1.69e-13!39;UBERON:0001890!1.69e-13!39;UBERON:0006240!1.69e-13!39;UBERON:0000955!4.86e-13!50;UBERON:0006238!4.86e-13!50;UBERON:0000073!8.50e-13!75;UBERON:0001016!8.50e-13!75;UBERON:0002791!1.75e-12!29;UBERON:0003528!1.75e-12!29;UBERON:0001893!1.75e-12!29;UBERON:0002616!2.03e-12!49;UBERON:0000033!2.34e-12!63;UBERON:0002346!2.94e-12!71;UBERON:0003075!2.94e-12!71;UBERON:0007284!2.94e-12!71;UBERON:0004121!2.75e-09!102;UBERON:0000924!2.75e-09!102;UBERON:0006601!2.75e-09!102;UBERON:0000956!2.50e-08!21;UBERON:0001869!2.50e-08!21;UBERON:0000203!2.50e-08!21;UBERON:0000153!6.89e-08!94;UBERON:0007811!6.29e-07!86 | |ontology_enrichment_uberon=UBERON:0002020!4.39e-15!34;UBERON:0001049!3.08e-14!52;UBERON:0005068!3.08e-14!52;UBERON:0006241!3.08e-14!52;UBERON:0007135!3.08e-14!52;UBERON:0001017!6.59e-14!73;UBERON:0005743!6.59e-14!73;UBERON:0003056!7.26e-14!49;UBERON:0003080!9.08e-14!40;UBERON:0002780!1.69e-13!39;UBERON:0001890!1.69e-13!39;UBERON:0006240!1.69e-13!39;UBERON:0000955!4.86e-13!50;UBERON:0006238!4.86e-13!50;UBERON:0000073!8.50e-13!75;UBERON:0001016!8.50e-13!75;UBERON:0002791!1.75e-12!29;UBERON:0003528!1.75e-12!29;UBERON:0001893!1.75e-12!29;UBERON:0002616!2.03e-12!49;UBERON:0000033!2.34e-12!63;UBERON:0002346!2.94e-12!71;UBERON:0003075!2.94e-12!71;UBERON:0007284!2.94e-12!71;UBERON:0004121!2.75e-09!102;UBERON:0000924!2.75e-09!102;UBERON:0006601!2.75e-09!102;UBERON:0000956!2.50e-08!21;UBERON:0001869!2.50e-08!21;UBERON:0000203!2.50e-08!21;UBERON:0000153!6.89e-08!94;UBERON:0007811!6.29e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.11e-17,34;UBERON:0000073,6.74e-17,54;UBERON:0002346,5.66e-16,64;UBERON:0003075,5.66e-16,64;UBERON:0007284,5.66e-16,64;UBERON:0001017,7.67e-16,73;UBERON:0001049,1.05e-15,52;UBERON:0005068,1.05e-15,52;UBERON:0006241,1.05e-15,52;UBERON:0007135,1.05e-15,52;UBERON:0003080,2.02e-15,40;UBERON:0003056,2.44e-15,49;UBERON:0002780,4.13e-15,39;UBERON:0001890,4.13e-15,39;UBERON:0006240,4.13e-15,39;UBERON:0001016,9.53e-15,75;UBERON:0003528,2.05e-14,29;UBERON:0002791,2.05e-14,29;UBERON:0001893,2.05e-14,29;UBERON:0000955,2.76e-14,47;UBERON:0006238,2.76e-14,47;UBERON:0002616,1.42e-13,46;UBERON:0010371,6.76e-13,73;UBERON:0004121,1.79e-11,95;UBERON:0000924,1.79e-11,95;UBERON:0006601,1.79e-11,95;UBERON:0000956,1.24e-09,21;UBERON:0001869,1.24e-09,21;UBERON:0000203,1.24e-09,21;UBERON:0010314,3.20e-07,92;UBERON:0002619,3.98e-07,17 | |||
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| ||
|short_description=p3@Nmral1 | |short_description=p3@Nmral1 | ||
}} | }} |
Latest revision as of 14:41, 25 September 2015
Short description: | p3@Nmral1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nmral1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000115851_5end |
EntrezGene: | Nmral1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.92e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.92e-14 | 23 |
neuron | 1.98e-10 | 33 |
neuronal stem cell | 1.98e-10 | 33 |
neuroblast | 1.98e-10 | 33 |
electrically signaling cell | 1.98e-10 | 33 |
electrically responsive cell | 3.81e-10 | 39 |
electrically active cell | 3.81e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.11e-17 | 34 |
regional part of nervous system | 6.74e-17 | 54 |
neurectoderm | 5.66e-16 | 64 |
neural plate | 5.66e-16 | 64 |
presumptive neural plate | 5.66e-16 | 64 |
central nervous system | 7.67e-16 | 73 |
neural tube | 1.05e-15 | 52 |
neural rod | 1.05e-15 | 52 |
future spinal cord | 1.05e-15 | 52 |
neural keel | 1.05e-15 | 52 |
anterior neural tube | 2.02e-15 | 40 |
pre-chordal neural plate | 2.44e-15 | 49 |
regional part of forebrain | 4.13e-15 | 39 |
forebrain | 4.13e-15 | 39 |
future forebrain | 4.13e-15 | 39 |
nervous system | 9.53e-15 | 75 |
brain grey matter | 2.05e-14 | 29 |
regional part of telencephalon | 2.05e-14 | 29 |
telencephalon | 2.05e-14 | 29 |
brain | 2.76e-14 | 47 |
future brain | 2.76e-14 | 47 |
regional part of brain | 1.42e-13 | 46 |
ecto-epithelium | 6.76e-13 | 73 |
ectoderm-derived structure | 1.79e-11 | 95 |
ectoderm | 1.79e-11 | 95 |
presumptive ectoderm | 1.79e-11 | 95 |
cerebral cortex | 1.24e-09 | 21 |
cerebral hemisphere | 1.24e-09 | 21 |
pallium | 1.24e-09 | 21 |
structure with developmental contribution from neural crest | 3.20e-07 | 92 |
regional part of cerebral cortex | 3.98e-07 | 17 |