FFCP PHASE1:Mm9::chr9:62384843..62384868,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235431 | |EntrezGene=235431 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=979 | |MCL_coexpression_id=979 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BH44 | |UniProt=Q8BH44 | ||
|association_with_transcript=0bp_to_ENSMUST00000048043,ENSMUST00000113985,NM_175484,uc009qaj.1,uc009qak.1_5end | |association_with_transcript=0bp_to_ENSMUST00000048043,ENSMUST00000113985,NM_175484,uc009qaj.1,uc009qak.1_5end | ||
|cluster_id=chr9:62384843..62384868,- | |||
|description=CAGE_peak_3_at_Coro2b_5end | |description=CAGE_peak_3_at_Coro2b_5end | ||
|id=chr9:62384843..62384868,- | |id=chr9:62384843..62384868,- | ||
|ontology_enrichment_celltype=CL:0000221!2.96e-19!44;CL:0000133!2.96e-19!44;CL:0002319!7.20e-19!43;CL:0000540!1.65e-18!33;CL:0000047!1.65e-18!33;CL:0000031!1.65e-18!33;CL:0000404!1.65e-18!33;CL:0000393!8.53e-15!39;CL:0000211!8.53e-15!39;CL:0000055!8.70e-15!50;CL:0000117!3.00e-12!23;CL:0000337!3.00e-12!23;CL:0000107!2.09e-07!9 | |ontology_enrichment_celltype=CL:0000221!2.96e-19!44;CL:0000133!2.96e-19!44;CL:0002319!7.20e-19!43;CL:0000540!1.65e-18!33;CL:0000047!1.65e-18!33;CL:0000031!1.65e-18!33;CL:0000404!1.65e-18!33;CL:0000393!8.53e-15!39;CL:0000211!8.53e-15!39;CL:0000055!8.70e-15!50;CL:0000117!3.00e-12!23;CL:0000337!3.00e-12!23;CL:0000107!2.09e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.84e-21,44;CL:0000133,4.84e-21,44;CL:0002319,1.27e-20,43;CL:0000540,6.06e-20,33;CL:0000047,6.06e-20,33;CL:0000031,6.06e-20,33;CL:0000404,6.06e-20,33;CL:0000393,4.07e-15,39;CL:0000211,4.07e-15,39;CL:0000117,3.75e-13,23;CL:0000337,3.75e-13,23;CL:0000107,6.68e-08,9;CL:0002321,5.56e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.05e-35!102;UBERON:0000924!4.05e-35!102;UBERON:0006601!4.05e-35!102;UBERON:0000073!2.94e-34!75;UBERON:0001016!2.94e-34!75;UBERON:0001017!2.54e-33!73;UBERON:0005743!2.54e-33!73;UBERON:0002346!4.32e-26!71;UBERON:0003075!4.32e-26!71;UBERON:0007284!4.32e-26!71;UBERON:0000033!1.43e-23!63;UBERON:0001049!1.11e-20!52;UBERON:0005068!1.11e-20!52;UBERON:0006241!1.11e-20!52;UBERON:0007135!1.11e-20!52;UBERON:0003056!2.96e-20!49;UBERON:0000955!5.54e-20!50;UBERON:0006238!5.54e-20!50;UBERON:0002616!1.68e-19!49;UBERON:0003080!5.01e-16!40;UBERON:0002020!5.87e-16!34;UBERON:0002780!1.31e-15!39;UBERON:0001890!1.31e-15!39;UBERON:0006240!1.31e-15!39;UBERON:0002791!9.44e-14!29;UBERON:0003528!9.44e-14!29;UBERON:0001893!9.44e-14!29;UBERON:0000153!4.77e-10!94;UBERON:0000956!5.84e-10!21;UBERON:0001869!5.84e-10!21;UBERON:0000203!5.84e-10!21;UBERON:0007811!8.54e-10!86;UBERON:0000025!4.90e-09!114;UBERON:0002619!3.92e-08!17;UBERON:0004111!4.71e-08!122;UBERON:0000010!5.64e-08!11;UBERON:0000468!9.49e-08!333;UBERON:0002410!2.09e-07!9 | |ontology_enrichment_uberon=UBERON:0004121!4.05e-35!102;UBERON:0000924!4.05e-35!102;UBERON:0006601!4.05e-35!102;UBERON:0000073!2.94e-34!75;UBERON:0001016!2.94e-34!75;UBERON:0001017!2.54e-33!73;UBERON:0005743!2.54e-33!73;UBERON:0002346!4.32e-26!71;UBERON:0003075!4.32e-26!71;UBERON:0007284!4.32e-26!71;UBERON:0000033!1.43e-23!63;UBERON:0001049!1.11e-20!52;UBERON:0005068!1.11e-20!52;UBERON:0006241!1.11e-20!52;UBERON:0007135!1.11e-20!52;UBERON:0003056!2.96e-20!49;UBERON:0000955!5.54e-20!50;UBERON:0006238!5.54e-20!50;UBERON:0002616!1.68e-19!49;UBERON:0003080!5.01e-16!40;UBERON:0002020!5.87e-16!34;UBERON:0002780!1.31e-15!39;UBERON:0001890!1.31e-15!39;UBERON:0006240!1.31e-15!39;UBERON:0002791!9.44e-14!29;UBERON:0003528!9.44e-14!29;UBERON:0001893!9.44e-14!29;UBERON:0000153!4.77e-10!94;UBERON:0000956!5.84e-10!21;UBERON:0001869!5.84e-10!21;UBERON:0000203!5.84e-10!21;UBERON:0007811!8.54e-10!86;UBERON:0000025!4.90e-09!114;UBERON:0002619!3.92e-08!17;UBERON:0004111!4.71e-08!122;UBERON:0000010!5.64e-08!11;UBERON:0000468!9.49e-08!333;UBERON:0002410!2.09e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.53e-38,95;UBERON:0000924,9.53e-38,95;UBERON:0006601,9.53e-38,95;UBERON:0001016,2.37e-37,75;UBERON:0001017,2.47e-36,73;UBERON:0002346,9.86e-30,64;UBERON:0003075,9.86e-30,64;UBERON:0007284,9.86e-30,64;UBERON:0010371,6.41e-27,73;UBERON:0000073,6.61e-24,54;UBERON:0001049,1.40e-22,52;UBERON:0005068,1.40e-22,52;UBERON:0006241,1.40e-22,52;UBERON:0007135,1.40e-22,52;UBERON:0003056,7.76e-22,49;UBERON:0010314,1.75e-21,92;UBERON:0000955,8.72e-20,47;UBERON:0006238,8.72e-20,47;UBERON:0002616,2.85e-19,46;UBERON:0003080,3.00e-17,40;UBERON:0002020,3.57e-17,34;UBERON:0002780,8.52e-17,39;UBERON:0001890,8.52e-17,39;UBERON:0006240,8.52e-17,39;UBERON:0003528,8.82e-15,29;UBERON:0002791,8.82e-15,29;UBERON:0001893,8.82e-15,29;UBERON:0000956,1.14e-10,21;UBERON:0001869,1.14e-10,21;UBERON:0000203,1.14e-10,21;UBERON:0002619,1.09e-08,17;UBERON:0000010,1.61e-08,11;UBERON:0002410,6.68e-08,9;UBERON:0000025,1.02e-07,114 | |||
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.709638518536602,0.734187008646726,0,6.32272953503295,1.97717564461025,2.13872888981712,3.07970127575798,5.75010257459886,0,0,0,1.80081605225163,1.43266719969378,0.515672092277442,8.9019242778223,12.1667925232568,11.4089652631112,1.35537812827653,0.889294796111139,0.899899717281399,0,0.7104801149461,4.19440154725767,4.2264013585371,8.60623782160365,7.96535036156975,7.36137364729837,9.14083150092171,7.06779331045163,10.779190330916,9.77623804386011,9.19218786610021,11.0115880999389,11.6195477657521,12.595735727012,8.5726087024626,8.87430142943374,8.33461392890816,11.4465029590566,7.87867654044352,10.5430790965999,9.72274332063103,7.40332740155335,8.20157561631323,3.93776205332557,9.82430281388212,1.44932244350839,0,0,0.539703191637817,0,0,0.561777680527007,1.02258193546835,0.519572009205738,0.70667914902068,6.05626705039726,2.56652954828636,0,0,0,0,0,0.45673551887624,1.03575153458869,1.7813056687779,3.81667718885499,1.21786191324856,1.84492397804847,1.80867168663147,2.3517741427141,0.753999547978053,1.73036477414062,0.86759614151947,0,2.42650274921114,2.65009822152472,2.90925151881133,0,14.9318206475889,17.1746299587033,0,0,0,0.127070227073065,7.48953197024113,10.0650132620098,8.04187853522332,12.8629996942285,10.4843337505436,10.1816141834184,7.13861557498134,4.07357455401265,1.7416975885413,1.0108910337347,4.8401626853889,4.03373373184381,4.36813998423599,7.02242306240862,5.87748789559289,12.5187158438443,11.2740073850668,13.3056448874815,12.1590584247337,3.44908788692548,1.13463648100692,1.93546236580344,3.5071317188412,2.78047249225598,1.39300866608867,2.05782136407943,1.79130840136644,0.702213187313235,0,0,2.48550927042602,1.40715635988658,0.900310307305074,2.13070262026689,1.77087808572663,1.23413690309903,0.930135779001631,0.804820204198858,2.91913355917924,1.6455984991348,1.47750717671186,1.4592385718254,0.730999937126662,0.658650345873152,0.805238512562231,11.9865270681553,10.0846520131699,0,0,2.13288250535234,3.48355007790658,1.03093969057675,0.80673409849337,1.55664630691409,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,1.98956472041151,0.974820435595601,0.898819408654221,0.432276099749388,0,3.22435431620239,1.94222471436539,5.63538678365402,2.03651327845314,1.55161989734101,2.80543279561274,2.27651533647326,0.147610147979602,0,0.493588655687202,0,1.50160595144485,0.786235980452812,0.449724224769707,0.811440485554012,0.482354319504834,0.50925170356284,0.863088412352432,0.810676133875177,0,1.43768206527355,0.372140947668503,1.24815069245824,0.252578877947112,0.179397413521912,0,1.47802552133284,1.89491411770485,3.7481944581666,3.22515662972857,3.05097322775053,2.34508760418542,4.52282917683426,3.31727201358258,4.72905432318573,5.75808193086815,5.10255259703959,1.3109065177259,1.55416483679306,2.16973587872267,0,0,0.491764273019036,0.551873492609465,9.79358598925531,8.55645312123083,0.327869890753351,0.504941854408746,11.9893123378178,11.3227235846025,16.1567548299599,18.8785350382516,18.0466926006739,26.3261173633614,17.8116708736954,17.5353514746787,17.7879500075936,8.35435422696698,0.851640511249612,0.534196811001766,4.0721739838394,0.989820737835213,0,1.94224508923985,0.604647113929502,0.565815239267694,0.885905678642318,1.22974059177571,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,2.04263763452273,3.96134406868882,3.23396709456886,3.00071849044229,2.6601035046341,3.74574516964348,3.9491764944509,5.48036908406279,0.23467170806371,0.847328283455281,0.441056796109924,3.2977250588296,1.77610869365496,1.38719727334758,0.954978752025092,1.31312719796049,0.582961673259701,13.9068976507882,0.170870880797853,2.06386867963222,0.555583582109135,0.753473828018764,0.136694227721025,0.228778173206523,1.35982743995084,0.559805809294632,0.276399947608848,0.954670618015114,3.63786392618306,1.01659733563424,1.72808545314882,1.04544148007234,1.52853794622324,2.15782954215713,2.97552440611209,0.523511883968059,0.648074866458964,0.621339313086926,0,1.34564891439581,0.827292452285488,2.33341426012857,1.29159823477731,1.18269287843545,3.63807439801837,1.8228613878153,0.629156066554265,0.241584120826006,0.288030006257865,0,1.41907650703115,0.616265742988964,0.389762468933385,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.487289403698762,0,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0.965947970160952,1.12609485270709,2.19781949120718,0.428736758158132,0,9.60078132449013,7.82552902062201,12.6037012956667,12.5452823110892,4.11049511862385,12.0863023582352,7.42524750254986,9.00642406448441,7.70342095273148,10.3552062350364,3.32119512269365,3.19219898720825,2.39027048055788,2.43106717068294,4.19226325255965,5.1476182366004,3.11145418922261,2.47242068686673,3.53011130550997,5.5593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| ||
|short_description=p3@Coro2b | |short_description=p3@Coro2b | ||
}} | }} |
Latest revision as of 23:25, 26 September 2015
Short description: | p3@Coro2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Coro2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:979 |
Association with transcript: | 0bp_to_ENSMUST00000048043, ENSMUST00000113985, NM_175484, uc009qaj.1, uc009qak.1_5end |
EntrezGene: | Coro2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.84e-21 | 44 |
neurectodermal cell | 4.84e-21 | 44 |
neural cell | 1.27e-20 | 43 |
neuron | 6.06e-20 | 33 |
neuronal stem cell | 6.06e-20 | 33 |
neuroblast | 6.06e-20 | 33 |
electrically signaling cell | 6.06e-20 | 33 |
electrically responsive cell | 4.07e-15 | 39 |
electrically active cell | 4.07e-15 | 39 |
CNS neuron (sensu Vertebrata) | 3.75e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.75e-13 | 23 |
autonomic neuron | 6.68e-08 | 9 |
embryonic cell | 5.56e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.53e-38 | 95 |
ectoderm | 9.53e-38 | 95 |
presumptive ectoderm | 9.53e-38 | 95 |
nervous system | 2.37e-37 | 75 |
central nervous system | 2.47e-36 | 73 |
neurectoderm | 9.86e-30 | 64 |
neural plate | 9.86e-30 | 64 |
presumptive neural plate | 9.86e-30 | 64 |
ecto-epithelium | 6.41e-27 | 73 |
regional part of nervous system | 6.61e-24 | 54 |
neural tube | 1.40e-22 | 52 |
neural rod | 1.40e-22 | 52 |
future spinal cord | 1.40e-22 | 52 |
neural keel | 1.40e-22 | 52 |
pre-chordal neural plate | 7.76e-22 | 49 |
structure with developmental contribution from neural crest | 1.75e-21 | 92 |
brain | 8.72e-20 | 47 |
future brain | 8.72e-20 | 47 |
regional part of brain | 2.85e-19 | 46 |
anterior neural tube | 3.00e-17 | 40 |
gray matter | 3.57e-17 | 34 |
regional part of forebrain | 8.52e-17 | 39 |
forebrain | 8.52e-17 | 39 |
future forebrain | 8.52e-17 | 39 |
brain grey matter | 8.82e-15 | 29 |
regional part of telencephalon | 8.82e-15 | 29 |
telencephalon | 8.82e-15 | 29 |
cerebral cortex | 1.14e-10 | 21 |
cerebral hemisphere | 1.14e-10 | 21 |
pallium | 1.14e-10 | 21 |
regional part of cerebral cortex | 1.09e-08 | 17 |
peripheral nervous system | 1.61e-08 | 11 |
autonomic nervous system | 6.68e-08 | 9 |
tube | 1.02e-07 | 114 |