FFCP PHASE1:Mm9::chr12:50486431..50486450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |MCL_coexpression_id=76 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:50486431..50486450,+ | |||
|description=CAGE_peak_at_chr12:50486431..50486450,+ | |description=CAGE_peak_at_chr12:50486431..50486450,+ | ||
|id=chr12:50486431..50486450,+ | |id=chr12:50486431..50486450,+ | ||
|ontology_enrichment_celltype=CL:0002609!3.95e-12!6;CL:0000055!1.74e-10!50;CL:0002319!5.37e-08!43;CL:0000393!7.35e-08!39;CL:0000211!7.35e-08!39;CL:0000221!1.02e-07!44;CL:0000133!1.02e-07!44;CL:0000117!2.02e-07!23;CL:0000337!2.02e-07!23 | |ontology_enrichment_celltype=CL:0002609!3.95e-12!6;CL:0000055!1.74e-10!50;CL:0002319!5.37e-08!43;CL:0000393!7.35e-08!39;CL:0000211!7.35e-08!39;CL:0000221!1.02e-07!44;CL:0000133!1.02e-07!44;CL:0000117!2.02e-07!23;CL:0000337!2.02e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,9.84e-36,6;CL:0002608,4.59e-18,3;CL:0000117,1.24e-15,23;CL:0000337,1.24e-15,23;CL:0000540,1.18e-10,33;CL:0000047,1.18e-10,33;CL:0000031,1.18e-10,33;CL:0000404,1.18e-10,33;CL:0002319,4.33e-10,43;CL:0000221,7.75e-10,44;CL:0000133,7.75e-10,44;CL:0000393,6.92e-09,39;CL:0000211,6.92e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!1.10e-29!29;UBERON:0003528!1.10e-29!29;UBERON:0001893!1.10e-29!29;UBERON:0000956!1.02e-26!21;UBERON:0001869!1.02e-26!21;UBERON:0000203!1.02e-26!21;UBERON:0002020!2.64e-24!34;UBERON:0002780!4.57e-24!39;UBERON:0001890!4.57e-24!39;UBERON:0006240!4.57e-24!39;UBERON:0003080!2.78e-23!40;UBERON:0002616!5.11e-23!49;UBERON:0000955!2.14e-22!50;UBERON:0006238!2.14e-22!50;UBERON:0002619!8.91e-20!17;UBERON:0003056!4.05e-19!49;UBERON:0000033!9.73e-19!63;UBERON:0001049!6.10e-18!52;UBERON:0005068!6.10e-18!52;UBERON:0006241!6.10e-18!52;UBERON:0007135!6.10e-18!52;UBERON:0001017!1.84e-16!73;UBERON:0005743!1.84e-16!73;UBERON:0000073!8.52e-16!75;UBERON:0001016!8.52e-16!75;UBERON:0007811!1.77e-13!86;UBERON:0001954!3.91e-13!7;UBERON:0003022!3.91e-13!7;UBERON:0002421!3.91e-13!7;UBERON:0000349!3.91e-13!7;UBERON:0002600!3.91e-13!7;UBERON:0002346!3.66e-12!71;UBERON:0003075!3.66e-12!71;UBERON:0007284!3.66e-12!71;UBERON:0000153!1.30e-11!94;UBERON:0004121!3.43e-10!102;UBERON:0000924!3.43e-10!102;UBERON:0006601!3.43e-10!102;UBERON:0002021!8.55e-09!10;UBERON:0000411!8.55e-09!10;UBERON:0001950!8.55e-09!10;UBERON:0000025!5.47e-07!114;UBERON:0000064!9.44e-07!99 | |ontology_enrichment_uberon=UBERON:0002791!1.10e-29!29;UBERON:0003528!1.10e-29!29;UBERON:0001893!1.10e-29!29;UBERON:0000956!1.02e-26!21;UBERON:0001869!1.02e-26!21;UBERON:0000203!1.02e-26!21;UBERON:0002020!2.64e-24!34;UBERON:0002780!4.57e-24!39;UBERON:0001890!4.57e-24!39;UBERON:0006240!4.57e-24!39;UBERON:0003080!2.78e-23!40;UBERON:0002616!5.11e-23!49;UBERON:0000955!2.14e-22!50;UBERON:0006238!2.14e-22!50;UBERON:0002619!8.91e-20!17;UBERON:0003056!4.05e-19!49;UBERON:0000033!9.73e-19!63;UBERON:0001049!6.10e-18!52;UBERON:0005068!6.10e-18!52;UBERON:0006241!6.10e-18!52;UBERON:0007135!6.10e-18!52;UBERON:0001017!1.84e-16!73;UBERON:0005743!1.84e-16!73;UBERON:0000073!8.52e-16!75;UBERON:0001016!8.52e-16!75;UBERON:0007811!1.77e-13!86;UBERON:0001954!3.91e-13!7;UBERON:0003022!3.91e-13!7;UBERON:0002421!3.91e-13!7;UBERON:0000349!3.91e-13!7;UBERON:0002600!3.91e-13!7;UBERON:0002346!3.66e-12!71;UBERON:0003075!3.66e-12!71;UBERON:0007284!3.66e-12!71;UBERON:0000153!1.30e-11!94;UBERON:0004121!3.43e-10!102;UBERON:0000924!3.43e-10!102;UBERON:0006601!3.43e-10!102;UBERON:0002021!8.55e-09!10;UBERON:0000411!8.55e-09!10;UBERON:0001950!8.55e-09!10;UBERON:0000025!5.47e-07!114;UBERON:0000064!9.44e-07!99 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.41e-39,21;UBERON:0001869,1.41e-39,21;UBERON:0000203,1.41e-39,21;UBERON:0003528,3.79e-33,29;UBERON:0002791,3.79e-33,29;UBERON:0001893,3.79e-33,29;UBERON:0002020,4.51e-28,34;UBERON:0002619,3.74e-27,17;UBERON:0002780,2.71e-24,39;UBERON:0001890,2.71e-24,39;UBERON:0006240,2.71e-24,39;UBERON:0002616,9.52e-24,46;UBERON:0003080,1.19e-23,40;UBERON:0000955,3.27e-23,47;UBERON:0006238,3.27e-23,47;UBERON:0000073,4.57e-23,54;UBERON:0001049,7.78e-21,52;UBERON:0005068,7.78e-21,52;UBERON:0006241,7.78e-21,52;UBERON:0007135,7.78e-21,52;UBERON:0001954,1.14e-20,7;UBERON:0003022,1.14e-20,7;UBERON:0002421,1.14e-20,7;UBERON:0000349,1.14e-20,7;UBERON:0002600,1.14e-20,7;UBERON:0003056,4.85e-19,49;UBERON:0001017,1.17e-16,73;UBERON:0002346,1.22e-16,64;UBERON:0003075,1.22e-16,64;UBERON:0007284,1.22e-16,64;UBERON:0001016,3.58e-16,75;UBERON:0010371,2.16e-14,73;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0010314,4.44e-11,92;UBERON:0002021,5.80e-10,10;UBERON:0000411,5.80e-10,10;UBERON:0001950,5.80e-10,10;UBERON:0000025,1.32e-08,114;UBERON:0004111,6.33e-08,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.183546752161682,0,1.30815093828268,0.878744730937887,0.972149495371417,0.279972843250725,0,0,0,0,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,3.83651565541367,7.83034442323806,3.36519938162211,0,0,1.10241719293459,1.43768206527355,1.83843757322004,1.10115880999389,0.127687338085188,0,0.131886287730194,0,1.04182674111352,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,0.502617408451458,0.521472960576829,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,0,1.71868654031819,1.71853182343688,0,0.755393897389701,0,0.900642406448441,3.17199686288943,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.256100609619477,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.183546752161682,0,1.30815093828268,0.878744730937887,0.972149495371417,0.279972843250725,0,0,0,0,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,3.83651565541367,7.83034442323806,3.36519938162211,0,0,1.10241719293459,1.43768206527355,1.83843757322004,1.10115880999389,0.127687338085188,0,0.131886287730194,0,1.04182674111352,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,0.502617408451458,0.521472960576829,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,0,1.71868654031819,1.71853182343688,0,0.755393897389701,0,0.900642406448441,3.17199686288943,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.256100609619477,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr12:50486431..50486450,+ | |short_description=p@chr12:50486431..50486450,+ | ||
}} | }} |
Latest revision as of 02:03, 5 August 2015
Short description: | p@chr12:50486431..50486450, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:50486431..50486450, + |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 9.84e-36 | 6 |
hippocampal neuron | 4.59e-18 | 3 |
CNS neuron (sensu Vertebrata) | 1.24e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-15 | 23 |
neuron | 1.18e-10 | 33 |
neuronal stem cell | 1.18e-10 | 33 |
neuroblast | 1.18e-10 | 33 |
electrically signaling cell | 1.18e-10 | 33 |
neural cell | 4.33e-10 | 43 |
ectodermal cell | 7.75e-10 | 44 |
neurectodermal cell | 7.75e-10 | 44 |
electrically responsive cell | 6.92e-09 | 39 |
electrically active cell | 6.92e-09 | 39 |