FFCP PHASE1:Mm9::chr3:34549144..34549155,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20674 | |EntrezGene=20674 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=443 | |MCL_coexpression_id=443 | ||
|TSSclassifier=NA | |||
|UniProt=Q60I23 | |UniProt=Q60I23 | ||
|association_with_transcript=86bp_to_ENSMUST00000171472_5end | |association_with_transcript=86bp_to_ENSMUST00000171472_5end | ||
|cluster_id=chr3:34549144..34549155,+ | |||
|description=CAGE_peak_5_at_Sox2_5end | |description=CAGE_peak_5_at_Sox2_5end | ||
|id=chr3:34549144..34549155,+ | |id=chr3:34549144..34549155,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.04e-25!44;CL:0000133!1.04e-25!44;CL:0002319!5.55e-25!43;CL:0000055!2.56e-19!50;CL:0000117!8.02e-18!23;CL:0000337!8.02e-18!23;CL:0000540!9.94e-17!33;CL:0000047!9.94e-17!33;CL:0000031!9.94e-17!33;CL:0000404!9.94e-17!33;CL:0000393!1.70e-12!39;CL:0000211!1.70e-12!39;CL:0002321!1.26e-10!70;CL:0000220!1.26e-10!70;CL:0000333!2.58e-09!10;CL:0000095!2.58e-09!10;CL:0000243!2.58e-09!10;CL:0000123!2.58e-09!10;CL:0000125!2.58e-09!10;CL:0000030!2.58e-09!10;CL:0000339!2.58e-09!10;CL:0002453!3.30e-08!8;CL:0002609!2.05e-07!6 | |ontology_enrichment_celltype=CL:0000221!1.04e-25!44;CL:0000133!1.04e-25!44;CL:0002319!5.55e-25!43;CL:0000055!2.56e-19!50;CL:0000117!8.02e-18!23;CL:0000337!8.02e-18!23;CL:0000540!9.94e-17!33;CL:0000047!9.94e-17!33;CL:0000031!9.94e-17!33;CL:0000404!9.94e-17!33;CL:0000393!1.70e-12!39;CL:0000211!1.70e-12!39;CL:0002321!1.26e-10!70;CL:0000220!1.26e-10!70;CL:0000333!2.58e-09!10;CL:0000095!2.58e-09!10;CL:0000243!2.58e-09!10;CL:0000123!2.58e-09!10;CL:0000125!2.58e-09!10;CL:0000030!2.58e-09!10;CL:0000339!2.58e-09!10;CL:0002453!3.30e-08!8;CL:0002609!2.05e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.66e-24,43;CL:0000221,4.39e-23,44;CL:0000133,4.39e-23,44;CL:0000117,3.80e-18,23;CL:0000337,3.80e-18,23;CL:0002609,1.36e-16,6;CL:0000540,1.32e-13,33;CL:0000047,1.32e-13,33;CL:0000031,1.32e-13,33;CL:0000404,1.32e-13,33;CL:0002321,1.36e-12,70;CL:0000333,2.77e-12,10;CL:0000095,2.77e-12,10;CL:0000243,2.77e-12,10;CL:0000123,2.77e-12,10;CL:0000125,2.77e-12,10;CL:0000030,2.77e-12,10;CL:0000339,2.77e-12,10;CL:0002453,1.03e-11,8;CL:0000393,5.39e-11,39;CL:0000211,5.39e-11,39;CL:0002608,7.30e-09,3;CL:0000128,3.09e-07,6;CL:0000126,3.09e-07,6;CL:0000127,3.09e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.39e-44!75;UBERON:0001016!3.39e-44!75;UBERON:0001017!1.24e-42!73;UBERON:0005743!1.24e-42!73;UBERON:0004121!6.54e-36!102;UBERON:0000924!6.54e-36!102;UBERON:0006601!6.54e-36!102;UBERON:0000033!3.42e-35!63;UBERON:0001049!1.20e-32!52;UBERON:0005068!1.20e-32!52;UBERON:0006241!1.20e-32!52;UBERON:0007135!1.20e-32!52;UBERON:0000955!1.57e-32!50;UBERON:0006238!1.57e-32!50;UBERON:0002616!1.34e-31!49;UBERON:0003056!7.10e-30!49;UBERON:0002346!8.21e-29!71;UBERON:0003075!8.21e-29!71;UBERON:0007284!8.21e-29!71;UBERON:0003080!2.95e-27!40;UBERON:0002780!6.95e-27!39;UBERON:0001890!6.95e-27!39;UBERON:0006240!6.95e-27!39;UBERON:0002020!2.00e-25!34;UBERON:0002791!2.19e-22!29;UBERON:0003528!2.19e-22!29;UBERON:0001893!2.19e-22!29;UBERON:0007811!5.11e-20!86;UBERON:0000956!4.08e-17!21;UBERON:0001869!4.08e-17!21;UBERON:0000203!4.08e-17!21;UBERON:0000153!1.38e-16!94;UBERON:0002619!1.38e-13!17;UBERON:0002021!6.08e-08!10;UBERON:0000411!6.08e-08!10;UBERON:0001950!6.08e-08!10;UBERON:0000025!2.44e-07!114;UBERON:0001954!4.03e-07!7;UBERON:0003022!4.03e-07!7;UBERON:0002421!4.03e-07!7;UBERON:0000349!4.03e-07!7;UBERON:0002600!4.03e-07!7;UBERON:0004111!5.62e-07!122 | |ontology_enrichment_uberon=UBERON:0000073!3.39e-44!75;UBERON:0001016!3.39e-44!75;UBERON:0001017!1.24e-42!73;UBERON:0005743!1.24e-42!73;UBERON:0004121!6.54e-36!102;UBERON:0000924!6.54e-36!102;UBERON:0006601!6.54e-36!102;UBERON:0000033!3.42e-35!63;UBERON:0001049!1.20e-32!52;UBERON:0005068!1.20e-32!52;UBERON:0006241!1.20e-32!52;UBERON:0007135!1.20e-32!52;UBERON:0000955!1.57e-32!50;UBERON:0006238!1.57e-32!50;UBERON:0002616!1.34e-31!49;UBERON:0003056!7.10e-30!49;UBERON:0002346!8.21e-29!71;UBERON:0003075!8.21e-29!71;UBERON:0007284!8.21e-29!71;UBERON:0003080!2.95e-27!40;UBERON:0002780!6.95e-27!39;UBERON:0001890!6.95e-27!39;UBERON:0006240!6.95e-27!39;UBERON:0002020!2.00e-25!34;UBERON:0002791!2.19e-22!29;UBERON:0003528!2.19e-22!29;UBERON:0001893!2.19e-22!29;UBERON:0007811!5.11e-20!86;UBERON:0000956!4.08e-17!21;UBERON:0001869!4.08e-17!21;UBERON:0000203!4.08e-17!21;UBERON:0000153!1.38e-16!94;UBERON:0002619!1.38e-13!17;UBERON:0002021!6.08e-08!10;UBERON:0000411!6.08e-08!10;UBERON:0001950!6.08e-08!10;UBERON:0000025!2.44e-07!114;UBERON:0001954!4.03e-07!7;UBERON:0003022!4.03e-07!7;UBERON:0002421!4.03e-07!7;UBERON:0000349!4.03e-07!7;UBERON:0002600!4.03e-07!7;UBERON:0004111!5.62e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.25e-28,75;UBERON:0001017,6.05e-27,73;UBERON:0004121,2.84e-22,95;UBERON:0000924,2.84e-22,95;UBERON:0006601,2.84e-22,95;UBERON:0000073,2.48e-21,54;UBERON:0002020,9.40e-20,34;UBERON:0002780,3.34e-19,39;UBERON:0001890,3.34e-19,39;UBERON:0006240,3.34e-19,39;UBERON:0000955,3.81e-19,47;UBERON:0006238,3.81e-19,47;UBERON:0003528,8.45e-19,29;UBERON:0002791,8.45e-19,29;UBERON:0001893,8.45e-19,29;UBERON:0003080,1.31e-18,40;UBERON:0001049,1.56e-18,52;UBERON:0005068,1.56e-18,52;UBERON:0006241,1.56e-18,52;UBERON:0007135,1.56e-18,52;UBERON:0002616,1.16e-17,46;UBERON:0003056,5.49e-16,49;UBERON:0002346,1.60e-15,64;UBERON:0003075,1.60e-15,64;UBERON:0007284,1.60e-15,64;UBERON:0000956,2.17e-15,21;UBERON:0001869,2.17e-15,21;UBERON:0000203,2.17e-15,21;UBERON:0010371,5.89e-13,73;UBERON:0002619,2.15e-10,17;UBERON:0010314,3.35e-09,92;UBERON:0001954,4.51e-09,7;UBERON:0003022,4.51e-09,7;UBERON:0002421,4.51e-09,7;UBERON:0000349,4.51e-09,7;UBERON:0002600,4.51e-09,7 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,8.06693078607652,0.659058548203415,1.55543919259427,2.09979632438044,1.43752564364972,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,6.2916023208865,8.4528027170742,8.70992743391212,12.4205463265155,9.46462326081219,1.14260393761521,0.883474163806454,4.40966877173835,5.17565543498476,2.75765635983006,1.10115880999389,1.14918604276669,0.921639199537461,0.527545150920775,1.28082701043374,1.04182674111352,0.837548997004143,1.12552522006336,0.30559649555362,0.589257170947335,1.13897344639282,0.186399445825301,0.302904773332736,1.43585964202892,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,2.01046963380583,0.521472960576829,1.79000820131231,0.62336413367868,1.46017136760982,0,0,0,0,0.390361328888111,0.229902104433473,0.540186389416048,0.30140963567143,0.476255494059295,0.2562274405697,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,1.41538265394416,0,0.292255857911312,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,1.55230420539305,0.428674070063185,0.532020700926821,0.178368817602071,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33191572024439,0.717710852875806,0.167884616364078,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0.68741272937475,0.685082519770642,3.7769694869485,0.675022500231806,0.900642406448441,1.35942722695261,0.51776031175182,1.24544817101012,0.798049746802062,1.19513524027894,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0.256100609619477,0.34461281373368,0,0,0,0,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0,0.365855945745545,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0,0,0 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|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,8.06693078607652,0.659058548203415,1.55543919259427,2.09979632438044,1.43752564364972,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,6.2916023208865,8.4528027170742,8.70992743391212,12.4205463265155,9.46462326081219,1.14260393761521,0.883474163806454,4.40966877173835,5.17565543498476,2.75765635983006,1.10115880999389,1.14918604276669,0.921639199537461,0.527545150920775,1.28082701043374,1.04182674111352,0.837548997004143,1.12552522006336,0.30559649555362,0.589257170947335,1.13897344639282,0.186399445825301,0.302904773332736,1.43585964202892,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,2.01046963380583,0.521472960576829,1.79000820131231,0.62336413367868,1.46017136760982,0,0,0,0,0.390361328888111,0.229902104433473,0.540186389416048,0.30140963567143,0.476255494059295,0.2562274405697,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,1.41538265394416,0,0.292255857911312,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,1.55230420539305,0.428674070063185,0.532020700926821,0.178368817602071,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33191572024439,0.717710852875806,0.167884616364078,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0.68741272937475,0.685082519770642,3.7769694869485,0.675022500231806,0.900642406448441,1.35942722695261,0.51776031175182,1.24544817101012,0.798049746802062,1.19513524027894,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0.256100609619477,0.34461281373368,0,0,0,0,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0,0.365855945745545,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0,0,0 | ||
|short_description=p5@Sox2 | |short_description=p5@Sox2 | ||
}} | }} |
Latest revision as of 23:15, 1 October 2015
Short description: | p5@Sox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sox2_5end |
Coexpression cluster: | MCL_coexpression_mm9:443 |
Association with transcript: | 86bp_to_ENSMUST00000171472_5end |
EntrezGene: | Sox2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.66e-24 | 43 |
ectodermal cell | 4.39e-23 | 44 |
neurectodermal cell | 4.39e-23 | 44 |
CNS neuron (sensu Vertebrata) | 3.80e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.80e-18 | 23 |
neuron of cerebral cortex | 1.36e-16 | 6 |
neuron | 1.32e-13 | 33 |
neuronal stem cell | 1.32e-13 | 33 |
neuroblast | 1.32e-13 | 33 |
electrically signaling cell | 1.32e-13 | 33 |
embryonic cell | 1.36e-12 | 70 |
migratory neural crest cell | 2.77e-12 | 10 |
neuron associated cell | 2.77e-12 | 10 |
glial cell (sensu Vertebrata) | 2.77e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 2.77e-12 | 10 |
glial cell | 2.77e-12 | 10 |
glioblast | 2.77e-12 | 10 |
glioblast (sensu Vertebrata) | 2.77e-12 | 10 |
oligodendrocyte precursor cell | 1.03e-11 | 8 |
electrically responsive cell | 5.39e-11 | 39 |
electrically active cell | 5.39e-11 | 39 |
hippocampal neuron | 7.30e-09 | 3 |
oligodendrocyte | 3.09e-07 | 6 |
macroglial cell | 3.09e-07 | 6 |
astrocyte | 3.09e-07 | 6 |