FFCP PHASE1:Mm9::chr7:17200127..17200137,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232906 | |EntrezGene=232906 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=941 | |MCL_coexpression_id=941 | ||
|TSSclassifier=NA | |||
|UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8 | |UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8 | ||
|association_with_transcript=204bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end | |association_with_transcript=204bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end | ||
|cluster_id=chr7:17200127..17200137,- | |||
|description=CAGE_peak_11_at_Grlf1_5end | |description=CAGE_peak_11_at_Grlf1_5end | ||
|id=chr7:17200127..17200137,- | |id=chr7:17200127..17200137,- | ||
|ontology_enrichment_celltype=CL:0000117!1.12e-13!23;CL:0000337!1.12e-13!23;CL:0000540!6.42e-11!33;CL:0000047!6.42e-11!33;CL:0000031!6.42e-11!33;CL:0000404!6.42e-11!33;CL:0000221!2.20e-09!44;CL:0000133!2.20e-09!44;CL:0002319!2.95e-09!43;CL:0000393!1.03e-07!39;CL:0000211!1.03e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.12e-13!23;CL:0000337!1.12e-13!23;CL:0000540!6.42e-11!33;CL:0000047!6.42e-11!33;CL:0000031!6.42e-11!33;CL:0000404!6.42e-11!33;CL:0000221!2.20e-09!44;CL:0000133!2.20e-09!44;CL:0002319!2.95e-09!43;CL:0000393!1.03e-07!39;CL:0000211!1.03e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-51,23;CL:0000337,2.38e-51,23;CL:0000540,5.26e-35,33;CL:0000047,5.26e-35,33;CL:0000031,5.26e-35,33;CL:0000404,5.26e-35,33;CL:0000393,3.27e-29,39;CL:0000211,3.27e-29,39;CL:0002319,3.03e-26,43;CL:0000221,1.38e-25,44;CL:0000133,1.38e-25,44;CL:0002321,4.66e-15,70;CL:0002613,4.44e-14,3;CL:0002612,1.77e-13,3;CL:0002614,6.19e-13,3;CL:0000723,6.32e-11,91;CL:0000048,6.32e-11,91;CL:0000034,4.53e-10,97;CL:0002611,7.45e-10,2;CL:0002610,6.81e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.35e-20!52;UBERON:0005068!5.35e-20!52;UBERON:0006241!5.35e-20!52;UBERON:0007135!5.35e-20!52;UBERON:0000073!2.80e-19!75;UBERON:0001016!2.80e-19!75;UBERON:0001017!5.00e-19!73;UBERON:0005743!5.00e-19!73;UBERON:0002020!2.14e-18!34;UBERON:0002346!1.85e-17!71;UBERON:0003075!1.85e-17!71;UBERON:0007284!1.85e-17!71;UBERON:0000033!6.70e-17!63;UBERON:0004121!9.91e-17!102;UBERON:0000924!9.91e-17!102;UBERON:0006601!9.91e-17!102;UBERON:0000955!1.04e-16!50;UBERON:0006238!1.04e-16!50;UBERON:0002616!3.37e-16!49;UBERON:0003056!2.83e-15!49;UBERON:0003080!7.08e-15!40;UBERON:0002780!9.16e-15!39;UBERON:0001890!9.16e-15!39;UBERON:0006240!9.16e-15!39;UBERON:0002791!3.11e-14!29;UBERON:0003528!3.11e-14!29;UBERON:0001893!3.11e-14!29;UBERON:0007811!5.45e-12!86;UBERON:0000153!3.14e-11!94;UBERON:0000956!8.67e-10!21;UBERON:0001869!8.67e-10!21;UBERON:0000203!8.67e-10!21;UBERON:0002619!3.58e-07!17;UBERON:0002021!8.45e-07!10;UBERON:0000411!8.45e-07!10;UBERON:0001950!8.45e-07!10 | |ontology_enrichment_uberon=UBERON:0001049!5.35e-20!52;UBERON:0005068!5.35e-20!52;UBERON:0006241!5.35e-20!52;UBERON:0007135!5.35e-20!52;UBERON:0000073!2.80e-19!75;UBERON:0001016!2.80e-19!75;UBERON:0001017!5.00e-19!73;UBERON:0005743!5.00e-19!73;UBERON:0002020!2.14e-18!34;UBERON:0002346!1.85e-17!71;UBERON:0003075!1.85e-17!71;UBERON:0007284!1.85e-17!71;UBERON:0000033!6.70e-17!63;UBERON:0004121!9.91e-17!102;UBERON:0000924!9.91e-17!102;UBERON:0006601!9.91e-17!102;UBERON:0000955!1.04e-16!50;UBERON:0006238!1.04e-16!50;UBERON:0002616!3.37e-16!49;UBERON:0003056!2.83e-15!49;UBERON:0003080!7.08e-15!40;UBERON:0002780!9.16e-15!39;UBERON:0001890!9.16e-15!39;UBERON:0006240!9.16e-15!39;UBERON:0002791!3.11e-14!29;UBERON:0003528!3.11e-14!29;UBERON:0001893!3.11e-14!29;UBERON:0007811!5.45e-12!86;UBERON:0000153!3.14e-11!94;UBERON:0000956!8.67e-10!21;UBERON:0001869!8.67e-10!21;UBERON:0000203!8.67e-10!21;UBERON:0002619!3.58e-07!17;UBERON:0002021!8.45e-07!10;UBERON:0000411!8.45e-07!10;UBERON:0001950!8.45e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.68e-33,34;UBERON:0000073,1.19e-25,54;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0001948,1.14e-21,5;UBERON:0002315,1.14e-21,5;UBERON:0001049,7.62e-21,52;UBERON:0005068,7.62e-21,52;UBERON:0006241,7.62e-21,52;UBERON:0007135,7.62e-21,52;UBERON:0002420,6.45e-19,8;UBERON:0007245,6.45e-19,8;UBERON:0010009,6.45e-19,8;UBERON:0010011,6.45e-19,8;UBERON:0000454,6.45e-19,8;UBERON:0003528,7.24e-19,29;UBERON:0002791,7.24e-19,29;UBERON:0001893,7.24e-19,29;UBERON:0002240,4.85e-18,6;UBERON:0005174,4.85e-18,6;UBERON:0001137,4.85e-18,6;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002346,2.03e-16,64;UBERON:0003075,2.03e-16,64;UBERON:0007284,2.03e-16,64;UBERON:0010371,4.74e-14,73;UBERON:0002780,1.57e-13,39;UBERON:0001890,1.57e-13,39;UBERON:0006240,1.57e-13,39;UBERON:0002257,1.77e-13,3;UBERON:0003080,3.84e-13,40;UBERON:0002038,6.19e-13,3;UBERON:0009663,6.19e-13,3;UBERON:0009661,6.19e-13,3;UBERON:0000125,6.19e-13,3;UBERON:0002308,6.19e-13,3;UBERON:0002616,3.60e-11,46;UBERON:0000955,6.85e-11,47;UBERON:0006238,6.85e-11,47;UBERON:0010314,1.46e-10,92;UBERON:0003056,2.30e-10,49;UBERON:0002256,7.45e-10,2;UBERON:0002950,7.81e-10,4;UBERON:0001891,7.81e-10,4;UBERON:0009616,7.81e-10,4;UBERON:0010286,7.81e-10,4;UBERON:0003076,6.22e-09,12;UBERON:0003057,6.22e-09,12;UBERON:0000369,1.23e-08,5;UBERON:0002435,1.23e-08,5;UBERON:0000204,1.23e-08,5;UBERON:0010082,1.23e-08,5;UBERON:0000025,5.80e-08,114;UBERON:0004111,3.01e-07,122;UBERON:0004684,6.81e-07,3;UBERON:0002275,6.81e-07,3;UBERON:0002021,8.30e-07,10;UBERON:0000411,8.30e-07,10;UBERON:0001950,8.30e-07,10 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.315462165358238,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0,0,1.41621522601718,3.1739458756322,0,0,0,0,0,0,0,0,1.03689612308478,0.675029691658453,0.630974884054146,2.57085885963423,1.76694832761291,0.244981598429908,1.53352753629178,0,0,2.55374676170375,1.84327839907492,2.1101806036831,3.93396867490361,1.56274011167028,1.3959149950069,1.12552522006336,1.83357897332172,1.47314292736834,1.42371680799103,2.60959224155421,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0.173485326766136,0,0,0,0,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0,0.239630249011841,0.599902730993408,0.254140454146129,0.149790639404823,0,0.502617408451458,0.695297280769106,0,0.41557608911912,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0.540186389416048,0.150704817835715,0.0680364991513279,0.12811372028485,0.374806898238915,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,0.210289948564127,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0.321101179975584,0.234423373184406,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0.488660878060728,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.428674070063185,0.354680467284547,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0.927126510052548,0.170870880797853,0,0,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.201652370273681,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.54667864109319,1.37016503954128,0,0.675022500231806,1.80128481289688,0.906284817968409,0.51776031175182,0.31136204275253,0,0.512200817262403,0,0.419226325255965,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.256100609619477,0.229741875822453,0,0,0.192909220463705,0.824171801606613,0,0,0,0,0.290692833264657,0.282328141245992,0,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.315462165358238,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0,0,1.41621522601718,3.1739458756322,0,0,0,0,0,0,0,0,1.03689612308478,0.675029691658453,0.630974884054146,2.57085885963423,1.76694832761291,0.244981598429908,1.53352753629178,0,0,2.55374676170375,1.84327839907492,2.1101806036831,3.93396867490361,1.56274011167028,1.3959149950069,1.12552522006336,1.83357897332172,1.47314292736834,1.42371680799103,2.60959224155421,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0.173485326766136,0,0,0,0,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0,0.239630249011841,0.599902730993408,0.254140454146129,0.149790639404823,0,0.502617408451458,0.695297280769106,0,0.41557608911912,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0.540186389416048,0.150704817835715,0.0680364991513279,0.12811372028485,0.374806898238915,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,0.210289948564127,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0.321101179975584,0.234423373184406,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0.488660878060728,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.428674070063185,0.354680467284547,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0.927126510052548,0.170870880797853,0,0,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.201652370273681,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.54667864109319,1.37016503954128,0,0.675022500231806,1.80128481289688,0.906284817968409,0.51776031175182,0.31136204275253,0,0.512200817262403,0,0.419226325255965,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.256100609619477,0.229741875822453,0,0,0.192909220463705,0.824171801606613,0,0,0,0,0.290692833264657,0.282328141245992,0,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p11@Grlf1 | |short_description=p11@Grlf1 | ||
}} | }} |
Latest revision as of 07:07, 26 September 2015
Short description: | p11@Grlf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Grlf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:941 |
Association with transcript: | 204bp_to_ENSMUST00000075845, NM_172739, uc009fhw.1_5end |
EntrezGene: | Grlf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.38e-51 | 23 |
neuroblast (sensu Vertebrata) | 2.38e-51 | 23 |
neuron | 5.26e-35 | 33 |
neuronal stem cell | 5.26e-35 | 33 |
neuroblast | 5.26e-35 | 33 |
electrically signaling cell | 5.26e-35 | 33 |
electrically responsive cell | 3.27e-29 | 39 |
electrically active cell | 3.27e-29 | 39 |
neural cell | 3.03e-26 | 43 |
ectodermal cell | 1.38e-25 | 44 |
neurectodermal cell | 1.38e-25 | 44 |
embryonic cell | 4.66e-15 | 70 |
striatum neuron | 4.44e-14 | 3 |
neuron of the ventral spinal cord | 1.77e-13 | 3 |
neuron of the substantia nigra | 6.19e-13 | 3 |
somatic stem cell | 6.32e-11 | 91 |
multi fate stem cell | 6.32e-11 | 91 |
stem cell | 4.53e-10 | 97 |
neuron of the dorsal spinal cord | 7.45e-10 | 2 |
raphe nuclei neuron | 6.81e-07 | 3 |