FFCP PHASE1:Mm9::chr2:25947481..25947508,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67991 | |EntrezGene=67991 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=283 | |MCL_coexpression_id=283 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-142bp_to_ENSMUST00000152133_5end | |association_with_transcript=-142bp_to_ENSMUST00000152133_5end | ||
|cluster_id=chr2:25947481..25947508,- | |||
|description=CAGE_peak_2_at_Nacc2_5end | |description=CAGE_peak_2_at_Nacc2_5end | ||
|id=chr2:25947481..25947508,- | |id=chr2:25947481..25947508,- | ||
|ontology_enrichment_celltype=CL:0000221!1.15e-21!44;CL:0000133!1.15e-21!44;CL:0000055!1.19e-21!50;CL:0002319!4.41e-21!43;CL:0000393!1.73e-16!39;CL:0000211!1.73e-16!39;CL:0000540!6.62e-15!33;CL:0000047!6.62e-15!33;CL:0000031!6.62e-15!33;CL:0000404!6.62e-15!33;CL:0002321!2.40e-13!70;CL:0000220!2.40e-13!70;CL:0000117!3.07e-12!23;CL:0000337!3.07e-12!23;CL:0000333!3.54e-07!10;CL:0000095!3.54e-07!10;CL:0000243!3.54e-07!10;CL:0000123!3.54e-07!10;CL:0000125!3.54e-07!10;CL:0000030!3.54e-07!10;CL:0000339!3.54e-07!10 | |ontology_enrichment_celltype=CL:0000221!1.15e-21!44;CL:0000133!1.15e-21!44;CL:0000055!1.19e-21!50;CL:0002319!4.41e-21!43;CL:0000393!1.73e-16!39;CL:0000211!1.73e-16!39;CL:0000540!6.62e-15!33;CL:0000047!6.62e-15!33;CL:0000031!6.62e-15!33;CL:0000404!6.62e-15!33;CL:0002321!2.40e-13!70;CL:0000220!2.40e-13!70;CL:0000117!3.07e-12!23;CL:0000337!3.07e-12!23;CL:0000333!3.54e-07!10;CL:0000095!3.54e-07!10;CL:0000243!3.54e-07!10;CL:0000123!3.54e-07!10;CL:0000125!3.54e-07!10;CL:0000030!3.54e-07!10;CL:0000339!3.54e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.22e-28,44;CL:0000133,2.22e-28,44;CL:0002319,1.43e-27,43;CL:0002321,2.95e-21,70;CL:0000393,1.35e-20,39;CL:0000211,1.35e-20,39;CL:0000540,4.54e-19,33;CL:0000047,4.54e-19,33;CL:0000031,4.54e-19,33;CL:0000404,4.54e-19,33;CL:0000117,2.33e-16,23;CL:0000337,2.33e-16,23;CL:0000333,2.37e-09,10;CL:0000095,2.37e-09,10;CL:0000243,2.37e-09,10;CL:0000123,2.37e-09,10;CL:0000125,2.37e-09,10;CL:0000030,2.37e-09,10;CL:0000339,2.37e-09,10;CL:0002453,2.95e-08,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.96e-34!75;UBERON:0001016!1.96e-34!75;UBERON:0001017!2.67e-33!73;UBERON:0005743!2.67e-33!73;UBERON:0004121!5.34e-30!102;UBERON:0000924!5.34e-30!102;UBERON:0006601!5.34e-30!102;UBERON:0000033!2.00e-23!63;UBERON:0001049!2.88e-22!52;UBERON:0005068!2.88e-22!52;UBERON:0006241!2.88e-22!52;UBERON:0007135!2.88e-22!52;UBERON:0000955!1.57e-21!50;UBERON:0006238!1.57e-21!50;UBERON:0002616!7.57e-21!49;UBERON:0002346!4.82e-19!71;UBERON:0003075!4.82e-19!71;UBERON:0007284!4.82e-19!71;UBERON:0002020!5.50e-18!34;UBERON:0002791!3.03e-15!29;UBERON:0003528!3.03e-15!29;UBERON:0001893!3.03e-15!29;UBERON:0003056!3.54e-15!49;UBERON:0003080!6.23e-15!40;UBERON:0002780!2.68e-14!39;UBERON:0001890!2.68e-14!39;UBERON:0006240!2.68e-14!39;UBERON:0000153!6.89e-12!94;UBERON:0007811!7.68e-12!86;UBERON:0000956!2.64e-11!21;UBERON:0001869!2.64e-11!21;UBERON:0000203!2.64e-11!21;UBERON:0002619!1.11e-09!17;UBERON:0003076!3.09e-08!12;UBERON:0003057!3.09e-08!12;UBERON:0004111!3.41e-08!122;UBERON:0000025!2.46e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!1.96e-34!75;UBERON:0001016!1.96e-34!75;UBERON:0001017!2.67e-33!73;UBERON:0005743!2.67e-33!73;UBERON:0004121!5.34e-30!102;UBERON:0000924!5.34e-30!102;UBERON:0006601!5.34e-30!102;UBERON:0000033!2.00e-23!63;UBERON:0001049!2.88e-22!52;UBERON:0005068!2.88e-22!52;UBERON:0006241!2.88e-22!52;UBERON:0007135!2.88e-22!52;UBERON:0000955!1.57e-21!50;UBERON:0006238!1.57e-21!50;UBERON:0002616!7.57e-21!49;UBERON:0002346!4.82e-19!71;UBERON:0003075!4.82e-19!71;UBERON:0007284!4.82e-19!71;UBERON:0002020!5.50e-18!34;UBERON:0002791!3.03e-15!29;UBERON:0003528!3.03e-15!29;UBERON:0001893!3.03e-15!29;UBERON:0003056!3.54e-15!49;UBERON:0003080!6.23e-15!40;UBERON:0002780!2.68e-14!39;UBERON:0001890!2.68e-14!39;UBERON:0006240!2.68e-14!39;UBERON:0000153!6.89e-12!94;UBERON:0007811!7.68e-12!86;UBERON:0000956!2.64e-11!21;UBERON:0001869!2.64e-11!21;UBERON:0000203!2.64e-11!21;UBERON:0002619!1.11e-09!17;UBERON:0003076!3.09e-08!12;UBERON:0003057!3.09e-08!12;UBERON:0004111!3.41e-08!122;UBERON:0000025!2.46e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.91e-43,75;UBERON:0001017,3.44e-41,73;UBERON:0004121,3.60e-38,95;UBERON:0000924,3.60e-38,95;UBERON:0006601,3.60e-38,95;UBERON:0000073,3.34e-29,54;UBERON:0001049,3.59e-27,52;UBERON:0005068,3.59e-27,52;UBERON:0006241,3.59e-27,52;UBERON:0007135,3.59e-27,52;UBERON:0002346,5.11e-27,64;UBERON:0003075,5.11e-27,64;UBERON:0007284,5.11e-27,64;UBERON:0010371,1.21e-24,73;UBERON:0002020,2.44e-24,34;UBERON:0000955,3.51e-23,47;UBERON:0006238,3.51e-23,47;UBERON:0002616,2.74e-22,46;UBERON:0003528,1.57e-20,29;UBERON:0002791,1.57e-20,29;UBERON:0001893,1.57e-20,29;UBERON:0003080,2.55e-17,40;UBERON:0010314,3.28e-17,92;UBERON:0002780,1.76e-16,39;UBERON:0001890,1.76e-16,39;UBERON:0006240,1.76e-16,39;UBERON:0003056,3.64e-16,49;UBERON:0000956,4.60e-15,21;UBERON:0001869,4.60e-15,21;UBERON:0000203,4.60e-15,21;UBERON:0002619,8.17e-13,17;UBERON:0003076,8.16e-11,12;UBERON:0003057,8.16e-11,12;UBERON:0011216,1.34e-08,194;UBERON:0002021,2.09e-08,10;UBERON:0000411,2.09e-08,10;UBERON:0001950,2.09e-08,10;UBERON:0004111,6.23e-08,122;UBERON:0000025,5.47e-07,114 | |||
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|short_description=p2@Nacc2 | |short_description=p2@Nacc2 | ||
}} | }} |
Latest revision as of 10:46, 26 September 2015
Short description: | p2@Nacc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nacc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | -142bp_to_ENSMUST00000152133_5end |
EntrezGene: | Nacc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.22e-28 | 44 |
neurectodermal cell | 2.22e-28 | 44 |
neural cell | 1.43e-27 | 43 |
embryonic cell | 2.95e-21 | 70 |
electrically responsive cell | 1.35e-20 | 39 |
electrically active cell | 1.35e-20 | 39 |
neuron | 4.54e-19 | 33 |
neuronal stem cell | 4.54e-19 | 33 |
neuroblast | 4.54e-19 | 33 |
electrically signaling cell | 4.54e-19 | 33 |
CNS neuron (sensu Vertebrata) | 2.33e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.33e-16 | 23 |
migratory neural crest cell | 2.37e-09 | 10 |
neuron associated cell | 2.37e-09 | 10 |
glial cell (sensu Vertebrata) | 2.37e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 2.37e-09 | 10 |
glial cell | 2.37e-09 | 10 |
glioblast | 2.37e-09 | 10 |
glioblast (sensu Vertebrata) | 2.37e-09 | 10 |
oligodendrocyte precursor cell | 2.95e-08 | 8 |