FFCP PHASE1:Hg19::chr2:8977714..8977765,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:8977714..8977765,-
|short_description=p1@KIDINS220
|description=CAGE_peak_1_at_KIDINS220_5end
|association_with_transcript=0bp_to_ENST00000256707,ENST00000...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57498 | |EntrezGene=57498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29508 | |HGNC=29508 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULH0,F8WAY8,E9PH70,B4DGY1,Q7Z322 | |UniProt=Q9ULH0,F8WAY8,E9PH70,B4DGY1,Q7Z322 | ||
|association_with_transcript=0bp_to_ENST00000256707,ENST00000319688,ENST00000418530,ENST00000427284,ENST00000473731,ENST00000488729,ENST00000489024,ENST00000496725,ENST00000541927,NM_020738,uc002qzc.2,uc002qzd.2,uc010yiv.1,uc010yiw.1_5end | |||
|cluster_id=chr2:8977714..8977765,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_KIDINS220_5end | |||
|id=chr2:8977714..8977765,- | |||
|ontology_enrichment_celltype=CL:0000766!8.66e-14!76;CL:0000839!6.42e-13!70;CL:0000557!3.71e-12!71;CL:0002009!1.34e-10!65;CL:0002194!1.62e-10!63;CL:0000576!1.62e-10!63;CL:0000040!1.62e-10!63;CL:0000559!1.62e-10!63;CL:0002057!3.06e-09!42;CL:0000738!5.72e-09!140;CL:0000763!2.45e-08!112;CL:0000049!2.45e-08!112;CL:0002031!5.80e-08!124;CL:0000860!8.40e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.77e-08;33!CL:0002057;1.77e-08;33!CL:0000473;3.50e-08;39!CL:0000234;3.50e-08;39!CL:0000766;5.39e-07;69!CL:0000576;5.79e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.29e-15,72;CL:0000839,2.34e-14,66;CL:0000557,1.64e-13,67;CL:0002009,6.71e-12,61;CL:0002194,7.69e-12,59;CL:0000576,7.69e-12,59;CL:0000040,7.69e-12,59;CL:0000559,7.69e-12,59;CL:0000473,2.73e-10,48;CL:0000234,2.73e-10,48;CL:0000738,1.26e-09,136;CL:0000860,3.06e-09,42;CL:0002057,3.06e-09,42;CL:0000763,4.63e-09,108;CL:0000049,4.63e-09,108;CL:0002031,1.29e-08,120;CL:0002087,5.60e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.06e-08;82!CL:0002057;5.30e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.10e-36!115;UBERON:0001049!3.73e-26!57;UBERON:0005068!3.73e-26!57;UBERON:0006241!3.73e-26!57;UBERON:0007135!3.73e-26!57;UBERON:0001017!4.46e-26!82;UBERON:0005743!2.96e-24!86;UBERON:0000073!1.25e-23!94;UBERON:0001016!1.25e-23!94;UBERON:0000955!2.06e-23!69;UBERON:0006238!2.06e-23!69;UBERON:0003080!3.46e-23!42;UBERON:0002616!4.20e-23!59;UBERON:0002780!7.09e-23!41;UBERON:0001890!7.09e-23!41;UBERON:0006240!7.09e-23!41;UBERON:0001893!5.16e-19!34;UBERON:0002020!8.18e-19!34;UBERON:0003528!8.18e-19!34;UBERON:0002791!2.31e-18!33;UBERON:0001869!9.24e-18!32;UBERON:0003075!1.64e-15!86;UBERON:0007284!1.64e-15!86;UBERON:0002346!3.71e-15!90;UBERON:0002619!1.45e-14!22;UBERON:0000956!6.37e-14!25;UBERON:0000203!6.37e-14!25;UBERON:0001950!1.66e-13!20;UBERON:0000153!5.66e-13!129;UBERON:0007811!5.66e-13!129;UBERON:0000033!2.66e-12!123;UBERON:0003056!3.97e-12!61;UBERON:0004121!1.72e-11!169;UBERON:0000924!1.93e-11!173;UBERON:0006601!1.93e-11!173;UBERON:0002390!8.39e-10!102;UBERON:0003061!8.39e-10!102;UBERON:0001474!1.53e-09!86;UBERON:0000062!4.56e-09!511;UBERON:0002371!5.13e-09!80;UBERON:0004765!9.49e-09!101;UBERON:0001434!9.49e-09!101;UBERON:0002193!2.76e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.18e-16;41!UBERON:0001890;1.18e-16;41!UBERON:0001893;2.78e-16;34!UBERON:0003528;4.33e-16;34!UBERON:0002020;4.33e-16;34!UBERON:0001869;4.80e-16;32!UBERON:0002791;4.89e-16;32!UBERON:0002619;1.33e-14;22!UBERON:0000073;1.52e-14;53!UBERON:0002616;1.52e-14;53!UBERON:0000956;6.01e-14;25!UBERON:0000203;6.01e-14;25!UBERON:0001950;1.54e-13;20!UBERON:0001017;1.99e-11;75!UBERON:0000955;6.01e-11;68!UBERON:0007023;2.98e-10;114!UBERON:0001016;3.31e-10;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.35e-35,114;UBERON:0001049,8.05e-26,56;UBERON:0005068,8.05e-26,56;UBERON:0006241,8.05e-26,56;UBERON:0007135,8.05e-26,56;UBERON:0001017,1.00e-25,81;UBERON:0001016,6.36e-25,89;UBERON:0000073,5.73e-24,53;UBERON:0002616,5.73e-24,53;UBERON:0000955,4.57e-23,68;UBERON:0006238,4.57e-23,68;UBERON:0002780,7.09e-23,41;UBERON:0001890,7.09e-23,41;UBERON:0003080,7.09e-23,41;UBERON:0006240,7.09e-23,41;UBERON:0001893,5.16e-19,34;UBERON:0003528,8.18e-19,34;UBERON:0002020,8.18e-19,34;UBERON:0001869,9.24e-18,32;UBERON:0002791,9.46e-18,32;UBERON:0003075,1.11e-15,82;UBERON:0007284,1.11e-15,82;UBERON:0002346,2.71e-15,86;UBERON:0002619,1.45e-14,22;UBERON:0000956,6.37e-14,25;UBERON:0000203,6.37e-14,25;UBERON:0001950,1.66e-13,20;UBERON:0003056,3.02e-12,61;UBERON:0004121,1.60e-11,171;UBERON:0000924,1.60e-11,171;UBERON:0006601,1.60e-11,171;UBERON:0010371,5.76e-11,104;UBERON:0002390,1.12e-10,98;UBERON:0003061,1.12e-10,98;UBERON:0001474,1.65e-10,82;UBERON:0002371,5.42e-10,76;UBERON:0004765,2.39e-09,90;UBERON:0001434,3.07e-09,100;UBERON:0011216,4.11e-09,223;UBERON:0002193,5.27e-09,108;UBERON:0002405,1.60e-08,93;UBERON:0010314,5.98e-08,132 | |||
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079988406 | ||
|short_description=p1@KIDINS220 | |||
}} | }} |
Latest revision as of 22:03, 18 September 2015
Short description: | p1@KIDINS220 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIDINS220_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000256707, ENST00000319688, ENST00000418530, ENST00000427284, ENST00000473731, ENST00000488729, ENST00000489024, ENST00000496725, ENST00000541927, NM_020738, uc002qzc.2, uc002qzd.2, uc010yiv.1, uc010yiw.1_5end |
EntrezGene: | KIDINS220 |
HGNC: | 29508 |
UniProt: | Q9ULH0F8WAY8E9PH70B4DGY1Q7Z322 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.29e-15 | 72 |
myeloid lineage restricted progenitor cell | 2.34e-14 | 66 |
granulocyte monocyte progenitor cell | 1.64e-13 | 67 |
macrophage dendritic cell progenitor | 6.71e-12 | 61 |
monopoietic cell | 7.69e-12 | 59 |
monocyte | 7.69e-12 | 59 |
monoblast | 7.69e-12 | 59 |
promonocyte | 7.69e-12 | 59 |
defensive cell | 2.73e-10 | 48 |
phagocyte | 2.73e-10 | 48 |
leukocyte | 1.26e-09 | 136 |
classical monocyte | 3.06e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.06e-09 | 42 |
myeloid cell | 4.63e-09 | 108 |
common myeloid progenitor | 4.63e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 1.29e-08 | 120 |
nongranular leukocyte | 5.60e-07 | 115 |