FFCP PHASE1:Hg19::chr3:133494272..133494284,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:133494272..133494284,+
|short_description=p5@TF
|description=CAGE_peak_5_at_TF_5end
|association_with_transcript=0bp_to_U88581_5end
|EntrezGene=7018
|HGN...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7018 | |EntrezGene=7018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11740 | |HGNC=11740 | ||
|TSSclassifier=strong | |||
|UniProt=P02787 | |UniProt=P02787 | ||
|association_with_transcript=0bp_to_U88581_5end | |||
|cluster_id=chr3:133494272..133494284,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_TF_5end | |||
|id=chr3:133494272..133494284,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.01e-13!12;CL:0000417!1.01e-13!12;CL:0000668!1.01e-13!12;CL:0000414!1.01e-13!12;CL:0000412!1.01e-13!12;CL:0000182!1.01e-13!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.54e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.54e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.47e-19;3!UBERON:0003057;5.47e-19;3!UBERON:0004161;8.69e-15;11!UBERON:0009497;1.77e-12;13!UBERON:0006222;1.22e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.01e-68!57;UBERON:0005068!1.01e-68!57;UBERON:0006241!1.01e-68!57;UBERON:0007135!1.01e-68!57;UBERON:0001017!4.79e-56!82;UBERON:0005743!7.70e-56!86;UBERON:0002616!9.10e-55!59;UBERON:0000955!3.72e-51!69;UBERON:0006238!3.72e-51!69;UBERON:0000073!1.10e-49!94;UBERON:0001016!1.10e-49!94;UBERON:0003075!9.00e-48!86;UBERON:0007284!9.00e-48!86;UBERON:0002780!4.16e-46!41;UBERON:0001890!4.16e-46!41;UBERON:0006240!4.16e-46!41;UBERON:0002346!3.09e-45!90;UBERON:0003080!7.14e-45!42;UBERON:0002020!1.75e-43!34;UBERON:0003528!1.75e-43!34;UBERON:0001893!3.51e-43!34;UBERON:0007023!1.41e-42!115;UBERON:0002791!1.15e-40!33;UBERON:0001869!8.93e-38!32;UBERON:0003056!2.03e-31!61;UBERON:0000033!1.84e-28!123;UBERON:0002619!3.13e-28!22;UBERON:0001950!6.27e-27!20;UBERON:0000153!1.02e-26!129;UBERON:0007811!1.02e-26!129;UBERON:0000025!1.47e-25!194;UBERON:0003076!1.16e-24!15;UBERON:0003057!1.16e-24!15;UBERON:0000956!1.52e-24!25;UBERON:0000203!1.52e-24!25;UBERON:0004121!1.73e-23!169;UBERON:0000924!1.01e-22!173;UBERON:0006601!1.01e-22!173;UBERON:0002308!2.14e-22!9;UBERON:0000125!2.14e-22!9;UBERON:0002298!3.87e-20!8;UBERON:0004111!1.89e-18!241;UBERON:0002420!5.00e-17!9;UBERON:0007245!5.00e-17!9;UBERON:0010009!5.00e-17!9;UBERON:0010011!5.00e-17!9;UBERON:0000454!5.00e-17!9;UBERON:0004733!1.93e-16!12;UBERON:0002028!1.93e-16!12;UBERON:0007277!1.93e-16!12;UBERON:0009663!2.25e-16!7;UBERON:0000477!1.10e-15!286;UBERON:0000483!2.01e-15!309;UBERON:0000119!3.65e-15!312;UBERON:0004732!4.55e-15!13;UBERON:0002107!1.05e-13!19;UBERON:0006925!1.05e-13!19;UBERON:0008836!1.05e-13!19;UBERON:0000200!1.44e-13!6;UBERON:0000475!3.77e-12!365;UBERON:0008835!1.39e-11!22;UBERON:0003894!1.39e-11!22;UBERON:0006331!3.15e-11!3;UBERON:0009854!5.33e-11!23;UBERON:0002240!7.08e-11!3;UBERON:0001896!7.32e-11!3;UBERON:0005290!7.32e-11!3;UBERON:0010096!7.32e-11!3;UBERON:0002771!8.65e-11!3;UBERON:0000988!1.06e-10!3;UBERON:0001872!1.74e-10!5;UBERON:0001871!2.99e-10!7;UBERON:0007499!5.65e-10!25;UBERON:0009497!5.65e-10!25;UBERON:0000015!5.65e-10!25;UBERON:0002423!5.65e-10!25;UBERON:0006235!5.65e-10!25;UBERON:0004161!5.65e-10!25;UBERON:0005057!1.60e-09!26;UBERON:0009856!1.60e-09!26;UBERON:0002680!7.06e-09!9;UBERON:0001895!7.06e-09!9;UBERON:0010092!7.06e-09!9;UBERON:0001897!3.50e-08!2;UBERON:0002368!4.46e-08!35;UBERON:0002148!7.19e-08!2;UBERON:0009662!7.19e-08!2;UBERON:0001875!9.75e-08!2;UBERON:0006514!9.75e-08!2;UBERON:0002365!1.06e-07!31;UBERON:0002330!1.06e-07!31;UBERON:0000062!1.54e-07!511;UBERON:0000369!1.67e-07!4;UBERON:0002435!1.67e-07!4;UBERON:0000204!1.67e-07!4;UBERON:0010082!1.67e-07!4;UBERON:0000064!3.40e-07!219;UBERON:0000481!9.29e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.86e-21;19!UBERON:0006925;4.86e-21;19!UBERON:0002240;5.47e-19;3!UBERON:0005174;5.47e-19;3!UBERON:0001137;5.47e-19;3!UBERON:0002780;3.24e-16;41!UBERON:0001890;3.24e-16;41!UBERON:0002423;1.05e-15;25!UBERON:0000073;1.72e-15;53!UBERON:0002616;1.72e-15;53!UBERON:0002791;6.50e-15;32!UBERON:0003528;5.02e-14;34!UBERON:0002020;5.02e-14;34!UBERON:0001897;9.52e-14;2!UBERON:0010225;9.52e-14;2!UBERON:0001875;4.46e-13;2!UBERON:0006514;4.46e-13;2!UBERON:0001893;4.90e-13;34!UBERON:0001869;7.77e-13;32!UBERON:0001017;8.25e-13;75!UBERON:0002619;3.36e-12;22!UBERON:0002365;5.46e-12;31!UBERON:0002330;5.46e-12;31!UBERON:0000125;2.26e-11;9!UBERON:0002308;2.26e-11;9!UBERON:0002420;3.39e-11;9!UBERON:0007245;3.39e-11;9!UBERON:0010009;3.39e-11;9!UBERON:0010011;3.39e-11;9!UBERON:0000454;3.39e-11;9!UBERON:0000956;1.07e-10;25!UBERON:0000203;1.07e-10;25!UBERON:0002368;1.32e-10;33!UBERON:0002298;4.83e-10;6!UBERON:0001950;6.15e-10;20!UBERON:0001016;7.41e-10;83!UBERON:0000955;1.46e-09;68!UBERON:0001896;2.75e-09;3!UBERON:0005290;2.75e-09;3!UBERON:0001894;1.01e-08;7!UBERON:0009663;1.45e-08;7!UBERON:0002038;5.96e-08;1!UBERON:0009661;5.96e-08;1!UBERON:0002950;5.96e-08;1!UBERON:0001891;5.96e-08;1!UBERON:0000949;8.39e-08;43!UBERON:0002784;2.67e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.61e-35,56;UBERON:0005068,4.61e-35,56;UBERON:0006241,4.61e-35,56;UBERON:0007135,4.61e-35,56;UBERON:0001017,2.02e-28,81;UBERON:0000073,5.27e-26,53;UBERON:0002616,5.27e-26,53;UBERON:0001016,3.15e-25,89;UBERON:0000955,7.51e-25,68;UBERON:0006238,7.51e-25,68;UBERON:0003075,7.13e-23,82;UBERON:0007284,7.13e-23,82;UBERON:0002780,3.37e-22,41;UBERON:0001890,3.37e-22,41;UBERON:0003080,3.37e-22,41;UBERON:0006240,3.37e-22,41;UBERON:0002346,1.21e-21,86;UBERON:0002107,4.68e-21,19;UBERON:0006925,4.68e-21,19;UBERON:0008836,4.68e-21,19;UBERON:0003528,3.43e-19,34;UBERON:0002020,3.43e-19,34;UBERON:0002240,8.46e-19,3;UBERON:0005174,8.46e-19,3;UBERON:0001137,8.46e-19,3;UBERON:0000025,1.09e-18,192;UBERON:0011216,4.80e-18,223;UBERON:0008835,5.06e-18,22;UBERON:0003894,5.06e-18,22;UBERON:0007023,1.31e-17,114;UBERON:0010371,2.84e-17,104;UBERON:0009854,3.46e-17,23;UBERON:0002791,8.69e-17,32;UBERON:0001893,9.88e-16,34;UBERON:0007499,1.02e-15,25;UBERON:0009497,1.02e-15,25;UBERON:0000015,1.02e-15,25;UBERON:0002423,1.02e-15,25;UBERON:0006235,1.02e-15,25;UBERON:0004161,1.02e-15,25;UBERON:0009856,4.59e-15,26;UBERON:0003076,2.23e-14,15;UBERON:0003057,2.23e-14,15;UBERON:0003056,3.13e-14,61;UBERON:0004111,6.14e-14,240;UBERON:0001897,8.12e-14,2;UBERON:0010225,8.12e-14,2;UBERON:0001869,1.87e-13,32;UBERON:0001875,5.38e-13,2;UBERON:0006514,5.38e-13,2;UBERON:0010314,7.95e-13,132;UBERON:0002365,1.93e-12,31;UBERON:0002330,1.93e-12,31;UBERON:0002619,3.65e-12,22;UBERON:0004121,2.40e-11,171;UBERON:0000924,2.40e-11,171;UBERON:0006601,2.40e-11,171;UBERON:0000125,2.48e-11,9;UBERON:0002308,2.48e-11,9;UBERON:0002420,4.15e-11,9;UBERON:0007245,4.15e-11,9;UBERON:0010009,4.15e-11,9;UBERON:0010011,4.15e-11,9;UBERON:0000454,4.15e-11,9;UBERON:0002368,7.03e-11,35;UBERON:0000956,1.15e-10,25;UBERON:0000203,1.15e-10,25;UBERON:0002298,4.47e-10,6;UBERON:0001950,6.52e-10,20;UBERON:0000483,8.09e-10,306;UBERON:0000119,1.13e-09,309;UBERON:0001896,2.43e-09,3;UBERON:0005290,2.43e-09,3;UBERON:0010096,2.43e-09,3;UBERON:0001894,1.03e-08,7;UBERON:0006222,1.03e-08,7;UBERON:0009663,1.57e-08,7;UBERON:0000949,3.41e-08,45;UBERON:0002038,5.96e-08,1;UBERON:0009661,5.96e-08,1;UBERON:0002950,5.96e-08,1;UBERON:0001891,5.96e-08,1;UBERON:0009616,5.96e-08,1;UBERON:0010286,5.96e-08,1;UBERON:0002784,2.47e-07,4 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.1669132322957,12.7767538168091,5.90789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,2.10838001152805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23138370497704,0,0,0.253243183823515,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,1.36905378891993,0,0,0,0,0,0,0,0,0,0,0,0,6.46022094919234,6.34602109534982,5.86410831531409,0.0984274815147488,0,0,2.17925449778521,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95691030930823,13.2506888912221,0.775697738169303,3.43804764530994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58634144372552,1.3771002377715,1.72022758707021,3.10601344303186,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,2.23487402680012,1.02558182120378,0,0.345786262321089,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,1.56215619722769,0.413373593002368,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0.611727596791485,0.394636641377094,0,0,0,0.628462359664008,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1593931382644,1.18818560130834,1.2679671827502,0,0,0,0,0,0,0,0,0,6.45028124181531,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,2.48750831837634,3.62015485516633,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.1669132322957,12.7767538168091,5.90789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,2.10838001152805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23138370497704,0,0,0.253243183823515,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,1.36905378891993,0,0,0,0,0,0,0,0,0,0,0,0,6.46022094919234,6.34602109534982,5.86410831531409,0.0984274815147488,0,0,2.17925449778521,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95691030930823,13.2506888912221,0.775697738169303,3.43804764530994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58634144372552,1.3771002377715,1.72022758707021,3.10601344303186,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,2.23487402680012,1.02558182120378,0,0.345786262321089,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,1.56215619722769,0.413373593002368,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0.611727596791485,0.394636641377094,0,0,0,0.628462359664008,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1593931382644,1.18818560130834,1.2679671827502,0,0,0,0,0,0,0,0,0,6.45028124181531,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,2.48750831837634,3.62015485516633,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@TF | |||
}} | }} |
Latest revision as of 21:43, 24 September 2015
Short description: | p5@TF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TF_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_U88581_5end |
EntrezGene: | TF |
HGNC: | 11740 |
UniProt: | P02787 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.54e-19 | 12 |