FFCP PHASE1:Hg19::chr3:16306432..16306491,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:16306432..16306491,-
|short_description=p1@DPH3
|description=CAGE_peak_1_at_DPH3_5end
|association_with_transcript=0bp_to_ENST00000383775,ENST00000488423_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285381 | |EntrezGene=285381 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27717 | |HGNC=27717 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FX2 | |UniProt=Q96FX2 | ||
|association_with_transcript=0bp_to_ENST00000383775,ENST00000488423_5end | |||
|cluster_id=chr3:16306432..16306491,- | |||
|description=CAGE_peak_1_at_DPH3_5end | |||
|id=chr3:16306432..16306491,- | |||
|ontology_enrichment_celltype=CL:0000144!8.14e-16!625;CL:0002057!3.97e-15!42;CL:0000034!1.36e-14!444;CL:0002371!1.42e-14!591;CL:0000723!2.26e-14!436;CL:0000048!2.47e-14!430;CL:0000860!1.14e-13!45;CL:0002194!1.20e-13!63;CL:0000576!1.20e-13!63;CL:0000040!1.20e-13!63;CL:0000559!1.20e-13!63;CL:0000548!2.37e-13!679;CL:0000004!2.37e-13!679;CL:0000255!2.37e-13!679;CL:0000766!2.62e-13!76;CL:0002009!3.62e-13!65;CL:0000012!1.63e-12!682;CL:0000839!2.61e-12!70;CL:0000003!4.96e-11!722;CL:0000557!2.22e-10!71;CL:0000134!1.60e-07!358;CL:0000763!4.73e-07!112;CL:0000049!4.73e-07!112;CL:0002320!9.16e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-14;33!CL:0002057;1.49e-14;33!CL:0000473;3.22e-12;39!CL:0000234;3.22e-12;39!CL:0000576;2.49e-09;48!CL:0000766;4.62e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.64e-15,48;CL:0000234,2.64e-15,48;CL:0000860,3.97e-15,42;CL:0002057,3.97e-15,42;CL:0000034,7.89e-15,441;CL:0002194,9.00e-15,59;CL:0000576,9.00e-15,59;CL:0000040,9.00e-15,59;CL:0000559,9.00e-15,59;CL:0000723,1.31e-14,433;CL:0000048,1.42e-14,427;CL:0000766,3.11e-14,72;CL:0002009,3.18e-14,61;CL:0000839,3.08e-13,66;CL:0000557,3.66e-11,67;CL:0000134,7.96e-08,354;CL:0000763,2.00e-07,108;CL:0000049,2.00e-07,108;CL:0002320,4.81e-07,361;CL:0000219,9.19e-07,386;CL:0002031,9.82e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.09e-13!167;UBERON:0002371!1.80e-10!80;UBERON:0004765!2.11e-09!101;UBERON:0001434!2.11e-09!101;UBERON:0001474!4.09e-09!86;UBERON:0002405!1.76e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.46e-13,167;UBERON:0002371,3.51e-11,76;UBERON:0004765,7.76e-10,90;UBERON:0001474,1.06e-09,82;UBERON:0001434,2.16e-09,100;UBERON:0002405,2.48e-09,93;UBERON:0000926,1.47e-08,315;UBERON:0004120,1.47e-08,315;UBERON:0006603,1.47e-08,315;UBERON:0002390,8.37e-07,98;UBERON:0003061,8.37e-07,98 | |||
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| ||
|short_description=p1@DPH3 | |||
}} | }} |
Latest revision as of 11:55, 16 September 2015
Short description: | p1@DPH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DPH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000383775, ENST00000488423_5end |
EntrezGene: | DPH3 |
HGNC: | 27717 |
UniProt: | Q96FX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.64e-15 | 48 |
phagocyte | 2.64e-15 | 48 |
classical monocyte | 3.97e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.97e-15 | 42 |
stem cell | 7.89e-15 | 441 |
monopoietic cell | 9.00e-15 | 59 |
monocyte | 9.00e-15 | 59 |
monoblast | 9.00e-15 | 59 |
promonocyte | 9.00e-15 | 59 |
somatic stem cell | 1.31e-14 | 433 |
multi fate stem cell | 1.42e-14 | 427 |
myeloid leukocyte | 3.11e-14 | 72 |
macrophage dendritic cell progenitor | 3.18e-14 | 61 |
myeloid lineage restricted progenitor cell | 3.08e-13 | 66 |
granulocyte monocyte progenitor cell | 3.66e-11 | 67 |
mesenchymal cell | 7.96e-08 | 354 |
myeloid cell | 2.00e-07 | 108 |
common myeloid progenitor | 2.00e-07 | 108 |
connective tissue cell | 4.81e-07 | 361 |
motile cell | 9.19e-07 | 386 |
hematopoietic lineage restricted progenitor cell | 9.82e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.46e-13 | 167 |
bone marrow | 3.51e-11 | 76 |
skeletal element | 7.76e-10 | 90 |
bone element | 1.06e-09 | 82 |
skeletal system | 2.16e-09 | 100 |
immune system | 2.48e-09 | 93 |
mesoderm | 1.47e-08 | 315 |
mesoderm-derived structure | 1.47e-08 | 315 |
presumptive mesoderm | 1.47e-08 | 315 |
hematopoietic system | 8.37e-07 | 98 |
blood island | 8.37e-07 | 98 |