FFCP PHASE1:Hg19::chr5:140753444..140753518,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:140753444..140753518,+
|short_description=p1@PCDHGA6
|description=CAGE_peak_1_at_PCDHGA6_5end
|association_with_transcript=-132bp_to_ENST00000517434,NM_018...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56109 | |EntrezGene=56109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8704 | |HGNC=8704 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5G7 | |UniProt=Q9Y5G7 | ||
|association_with_transcript=-132bp_to_ENST00000517434,NM_018919,NM_032086,uc003ljy.1,uc011dau.1_5end | |||
|cluster_id=chr5:140753444..140753518,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_PCDHGA6_5end | |||
|id=chr5:140753444..140753518,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.86e-13!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.36e-27!86;UBERON:0001017!3.38e-26!82;UBERON:0003075!5.88e-26!86;UBERON:0007284!5.88e-26!86;UBERON:0001049!6.37e-25!57;UBERON:0005068!6.37e-25!57;UBERON:0006241!6.37e-25!57;UBERON:0007135!6.37e-25!57;UBERON:0000475!6.74e-25!365;UBERON:0002616!2.52e-24!59;UBERON:0000955!1.21e-23!69;UBERON:0006238!1.21e-23!69;UBERON:0002346!4.07e-23!90;UBERON:0000073!6.80e-23!94;UBERON:0001016!6.80e-23!94;UBERON:0007023!7.60e-21!115;UBERON:0000033!1.13e-20!123;UBERON:0002780!1.30e-20!41;UBERON:0001890!1.30e-20!41;UBERON:0006240!1.30e-20!41;UBERON:0003056!2.19e-20!61;UBERON:0000153!4.62e-20!129;UBERON:0007811!4.62e-20!129;UBERON:0003080!1.36e-19!42;UBERON:0000119!1.09e-18!312;UBERON:0004121!1.92e-18!169;UBERON:0001893!1.92e-18!34;UBERON:0000483!2.59e-18!309;UBERON:0000477!2.73e-18!286;UBERON:0002791!6.72e-18!33;UBERON:0004111!6.77e-18!241;UBERON:0001869!1.82e-17!32;UBERON:0002020!3.28e-17!34;UBERON:0003528!3.28e-17!34;UBERON:0000025!4.00e-17!194;UBERON:0000924!6.13e-17!173;UBERON:0006601!6.13e-17!173;UBERON:0000481!7.13e-17!347;UBERON:0000468!1.83e-14!659;UBERON:0000956!5.06e-14!25;UBERON:0000203!5.06e-14!25;UBERON:0002619!1.21e-13!22;UBERON:0001950!3.69e-13!20;UBERON:0000467!4.13e-10!625;UBERON:0000480!6.20e-10!626;UBERON:0000064!5.93e-09!219;UBERON:0000922!9.02e-08!612;UBERON:0002049!2.45e-07!79;UBERON:0007798!2.45e-07!79;UBERON:0002385!9.11e-07!63;UBERON:0001015!9.11e-07!63;UBERON:0000383!9.11e-07!63;UBERON:0002050!9.76e-07!605;UBERON:0005423!9.76e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.65e-18;34!UBERON:0001869;1.31e-17;32!UBERON:0002791;2.39e-17;32!UBERON:0002780;4.78e-17;41!UBERON:0001890;4.78e-17;41!UBERON:0000073;2.42e-16;53!UBERON:0002616;2.42e-16;53!UBERON:0003528;5.47e-16;34!UBERON:0002020;5.47e-16;34!UBERON:0001950;1.03e-15;20!UBERON:0002619;2.20e-15;22!UBERON:0000956;6.26e-15;25!UBERON:0000203;6.26e-15;25!UBERON:0000955;2.63e-13;68!UBERON:0001017;3.81e-13;75!UBERON:0001016;4.63e-11;83!UBERON:0002420;2.48e-07;9!UBERON:0007245;2.48e-07;9!UBERON:0010009;2.48e-07;9!UBERON:0010011;2.48e-07;9!UBERON:0000454;2.48e-07;9!UBERON:0001871;6.57e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.42e-31,81;UBERON:0001049,6.15e-29,56;UBERON:0005068,6.15e-29,56;UBERON:0006241,6.15e-29,56;UBERON:0007135,6.15e-29,56;UBERON:0003075,9.55e-29,82;UBERON:0007284,9.55e-29,82;UBERON:0000073,1.29e-27,53;UBERON:0002616,1.29e-27,53;UBERON:0000955,7.34e-27,68;UBERON:0006238,7.34e-27,68;UBERON:0002346,2.86e-26,86;UBERON:0001016,1.30e-25,89;UBERON:0002780,2.43e-23,41;UBERON:0001890,2.43e-23,41;UBERON:0003080,2.43e-23,41;UBERON:0006240,2.43e-23,41;UBERON:0003056,2.52e-22,61;UBERON:0010371,4.43e-22,104;UBERON:0001893,2.81e-21,34;UBERON:0010314,2.80e-20,132;UBERON:0001869,5.63e-20,32;UBERON:0007023,7.80e-20,114;UBERON:0002791,1.16e-19,32;UBERON:0003528,6.78e-19,34;UBERON:0002020,6.78e-19,34;UBERON:0001950,5.10e-16,20;UBERON:0002619,9.97e-16,22;UBERON:0004121,1.09e-15,171;UBERON:0000924,1.09e-15,171;UBERON:0006601,1.09e-15,171;UBERON:0000956,2.16e-15,25;UBERON:0000203,2.16e-15,25;UBERON:0000025,1.46e-12,192;UBERON:0004111,3.20e-12,240;UBERON:0000483,1.44e-11,306;UBERON:0000119,1.93e-11,309;UBERON:0011216,4.12e-11,223;UBERON:0002420,1.83e-07,9;UBERON:0007245,1.83e-07,9;UBERON:0010009,1.83e-07,9;UBERON:0010011,1.83e-07,9;UBERON:0000454,1.83e-07,9;UBERON:0001871,6.07e-07,6;UBERON:0003076,6.76e-07,15;UBERON:0003057,6.76e-07,15 | |||
|phase1_expression=2.72517568905835,2.5692062866918,4.36958652697511,2.00146596706261,0.446961094427288,0.872338524100369,0,1.26343974685366,2.08948502559871,0,0,0.436882744260345,0.263766978228454,3.83675694176145,0.994192127183747,1.34465029290355,1.80808358407193,2.19093027116212,3.41552959153355,1.35433163884467,0.612002073732759,4.38836610069323,1.71741592278634,0.821246550437305,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0,1.53435074212236,0.722878304769133,3.50936537445123,1.73815822752988,2.3858578411533,0,1.03988298880475,0.665188192387692,0.790513071238134,2.94702919869853,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.347140501607594,0.56530794192401,2.51699661725944,0.550236083880135,0,1.55050055501597,1.42306505074684,2.67776490211736,0.805658634218294,1.52054421143703,1.22031028774085,0,0.81014194788176,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0.993943903390637,0.506522046658319,1.85372853138506,2.0078563452417,0.709336764396714,0.560677600142307,0,1.48000529050296,0.311211035399766,0.942974704487816,0.326923806226917,5.44886739521753,3.45705554687999,0.468642863667593,0,0.570471821544449,0.448346041655403,0.469737994575059,0.647491777472526,0,1.02077085627447,1.35117749042945,1.23990937410919,0,0.989067717114227,0,1.43723628363248,0.673344455816265,0.625592599359821,0.831192346452549,0.877955241761676,0.612975591598039,0.901428353439581,0.794025282120147,2.15267562826634,1.70845911054854,1.27159140695737,2.40072876867522,1.64884046781502,2.57640540045629,2.04728541964749,1.5189869901714,0.68205903612839,2.27190396819703,1.93304787148829,0.646584227275248,2.84007674013291,1.30977727695932,1.69560592310488,0,0,0,0.365921118388786,0.795178609928912,0.464775771478074,0.725627385107593,1.51392510525377,0,1.56449532329816,0.643240938192885,0,4.17931135228781,2.16563844500876,0,0,0,0,0,0,0,0,0,0.738155454624648,4.20725321410337,1.6462960453256,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0,1.02940686179115,0.329250856225877,0,0,0.185176890317059,1.3032332212413,0,1.44331342025273,2.31860809950154,2.23076519048061,0.577465791044295,1.85194205030644,1.14152491340759,0,0,0,0,0,0,0,0.567100388969546,0.358234090811393,0,0,0,0,0,0.144119953416961,0,1.14296209725904,1.14596527667483,5.86087236050235,0,0.205654985406647,0.600686115687835,1.42913216315289,1.12131084345361,0.43596006883328,0.95339771567235,2.19761916788222,0,0,2.39344304926383,3.12022310734098,0.257207374262142,0,0.266422179016099,1.57275793023962,2.71310802695722,0,0.325736184293735,1.42156779497018,0,1.50719688529793,0,1.49959486773086,0,0,0,3.35474797688216,2.29723871668228,1.42636905040718,1.30303176000821,0.61642896765115,2.32779252211864,0,0,0,0,3.04913549066956,5.20559415430487,4.63973287666617,4.52293916402742,3.82763250991898,0,0,0,7.85225547002495,2.50085260529839,1.35632511849868,3.32753378449291,1.96271887676878,0.788512075169673,0.35142424497814,3.00946099727719,9.09630016223939,2.0694614258501,1.99267679560631,1.65932251687533,3.21469373531907,8.81105208582333,2.05886054286514,0,0,0,0,0,0.604780586659361,4.21783273291921,4.910783145218,1.68396056659844,3.71603532841533,3.58195074346692,1.76939313257968,0,0.308419387605311,0.710246901252508,0.9033987161519,0,0.813472649219715,0.120859449591622,0.200506470303285,0,1.03333003348146,0.910455840033585,2.09799063935079,0.451199612907412,0.385076685522074,0.784349769176855,1.46139224653261,0.949964660035881,0,0.340187410553031,1.29549549661284,0,0.541892875087706,3.01013864312912,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,1.96808787419823,1.95227036798582,1.23649213977267,0,0,0,0,3.21367859688319,0.580024309752732,0.154048617114644,0.614014698904518,0.137836572484531,0.859361958946189,1.30515024522806,0.340906509664404,2.75999310504886,0.330569830721956,0,0.382838137483752,0.10115778085555,0,2.83331112147576,0.6970372701606,1.23213432070436,0.532306030317022,1.73986598415015,1.11194531462352,0.143124886741991,0.744316738719335,0,1.14378116354295,1.79128453917934,2.1396949401696,2.86382923133343,0.78494864019923,1.97859703341646,1.37268514868027,0.942499218765491,1.01091240786658,1.58510321173008,0,0,2.92456187557541,3.16950440270266,0.818999468447914,0.707027159768564,2.26016233240486,0.551365343546124,0,0.876901770507525,1.15755106853338,1.9676842561399,0.202910376962704,0,0.281695602532241,0.573645408816206,1.08073945114433,0,0.709522128141196,1.26664581178598,0.329294892959902,1.51789269506286,0.699869440489966,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0.71623345421307,0,0.307160702099232,4.97073823883149,3.93874365949436,5.56543525114529,0,0.844501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| ||
|short_description=p1@PCDHGA6 | |||
}} | }} |
Latest revision as of 04:09, 25 September 2015
Short description: | p1@PCDHGA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHGA6_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -132bp_to_ENST00000517434, NM_018919, NM_032086, uc003ljy.1, uc011dau.1_5end |
EntrezGene: | PCDHGA6 |
HGNC: | 8704 |
UniProt: | Q9Y5G7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data