FFCP PHASE1:Hg19::chr5:156536090..156536106,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:156536090..156536106,-
|short_description=p8@HAVCR2
|description=CAGE_peak_8_at_HAVCR2_5end
|association_with_transcript=0bp_to_ENST00000522902_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84868 | |EntrezGene=84868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18437 | |HGNC=18437 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522902_5end | |||
|cluster_id=chr5:156536090..156536106,- | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_8_at_HAVCR2_5end | |||
|id=chr5:156536090..156536106,- | |||
|ontology_enrichment_celltype=CL:0000557!3.81e-49!71;CL:0000839!2.19e-44!70;CL:0000037!2.25e-44!172;CL:0000566!2.25e-44!172;CL:0000763!3.60e-44!112;CL:0000049!3.60e-44!112;CL:0000766!4.77e-44!76;CL:0002009!8.13e-44!65;CL:0000738!4.54e-43!140;CL:0002032!5.48e-42!165;CL:0000837!5.48e-42!165;CL:0002194!7.42e-42!63;CL:0000576!7.42e-42!63;CL:0000040!7.42e-42!63;CL:0000559!7.42e-42!63;CL:0002031!7.31e-40!124;CL:0000988!9.42e-40!182;CL:0002057!1.63e-39!42;CL:0002087!1.31e-36!119;CL:0000860!1.20e-35!45;CL:0000990!3.73e-08!8;CL:0000451!1.04e-07!10;CL:0002393!4.95e-07!9;CL:0002397!4.95e-07!9;CL:0000840!7.92e-07!5;CL:0001029!7.92e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.36e-48;39!CL:0000234;1.36e-48;39!CL:0000860;2.27e-48;33!CL:0002057;2.27e-48;33!CL:0000576;1.34e-34;48!CL:0000766;6.78e-28;69!CL:0000763;6.61e-18;100!CL:0000235;9.15e-12;6!CL:0000738;6.88e-11;136!CL:0002087;4.52e-09;104!CL:0000097;1.04e-08;5!CL:0000840;4.46e-08;5!CL:0000988;3.85e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.20e-76,67;CL:0000766,7.60e-70,72;CL:0000839,2.02e-69,66;CL:0002009,8.84e-68,61;CL:0002194,1.62e-64,59;CL:0000576,1.62e-64,59;CL:0000040,1.62e-64,59;CL:0000559,1.62e-64,59;CL:0000473,4.88e-63,48;CL:0000234,4.88e-63,48;CL:0000763,2.87e-57,108;CL:0000049,2.87e-57,108;CL:0000860,1.33e-52,42;CL:0002057,1.33e-52,42;CL:0000738,2.96e-41,136;CL:0002031,3.14e-41,120;CL:0000037,8.76e-40,168;CL:0002032,2.04e-38,161;CL:0000837,2.04e-38,161;CL:0000988,1.18e-36,177;CL:0002087,8.39e-34,115;CL:0000235,9.77e-12,6;CL:0000097,9.22e-09,5;CL:0002028,9.22e-09,5;CL:0000134,9.39e-09,354;CL:0002320,3.07e-08,361;CL:0000840,4.27e-08,5;CL:0001029,4.27e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;7.65e-38;42!CL:0000049;1.34e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.52e-46!102;UBERON:0003061!1.52e-46!102;UBERON:0002371!3.87e-44!80;UBERON:0002193!3.83e-42!112;UBERON:0001474!3.32e-39!86;UBERON:0002405!2.22e-32!115;UBERON:0004765!8.64e-31!101;UBERON:0001434!8.64e-31!101;UBERON:0007023!2.77e-28!115;UBERON:0001049!1.76e-14!57;UBERON:0005068!1.76e-14!57;UBERON:0006241!1.76e-14!57;UBERON:0007135!1.76e-14!57;UBERON:0002204!5.14e-13!167;UBERON:0003081!7.46e-13!216;UBERON:0002780!4.19e-12!41;UBERON:0001890!4.19e-12!41;UBERON:0006240!4.19e-12!41;UBERON:0003080!1.34e-11!42;UBERON:0002616!6.15e-11!59;UBERON:0001893!8.17e-11!34;UBERON:0002020!8.22e-11!34;UBERON:0003528!8.22e-11!34;UBERON:0002791!2.23e-10!33;UBERON:0001869!1.91e-09!32;UBERON:0003075!2.01e-09!86;UBERON:0007284!2.01e-09!86;UBERON:0002346!1.85e-08!90;UBERON:0000955!3.26e-08!69;UBERON:0006238!3.26e-08!69;UBERON:0001017!3.90e-08!82;UBERON:0005743!9.54e-08!86;UBERON:0002308!1.65e-07!9;UBERON:0000125!1.65e-07!9;UBERON:0002420!2.48e-07!9;UBERON:0007245!2.48e-07!9;UBERON:0010009!2.48e-07!9;UBERON:0010011!2.48e-07!9;UBERON:0000454!2.48e-07!9;UBERON:0002619!3.08e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;4.27e-10;9!UBERON:0002308;4.27e-10;9!UBERON:0002298;1.80e-08;6!UBERON:0009663;7.75e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-70,76;UBERON:0001474,4.14e-64,82;UBERON:0002390,9.82e-63,98;UBERON:0003061,9.82e-63,98;UBERON:0002405,1.13e-60,93;UBERON:0002193,6.35e-57,108;UBERON:0004765,9.22e-57,90;UBERON:0001434,4.42e-51,100;UBERON:0002204,3.15e-23,167;UBERON:0003081,5.42e-22,203;UBERON:0000125,9.13e-10,9;UBERON:0002308,9.13e-10,9;UBERON:0000926,7.85e-09,315;UBERON:0004120,7.85e-09,315;UBERON:0006603,7.85e-09,315;UBERON:0002298,3.02e-08,6;UBERON:0001049,4.36e-08,56;UBERON:0005068,4.36e-08,56;UBERON:0006241,4.36e-08,56;UBERON:0007135,4.36e-08,56;UBERON:0002384,5.55e-08,371;UBERON:0000073,7.47e-08,53;UBERON:0002616,7.47e-08,53;UBERON:0009663,1.32e-07,7 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.0787107813136792,1.57345710739562,3.45446458287491,1.70297735647684,0,0,0,1.54934401160603,0,1.76160263600908,1.66198622559563,2.00544447470142,0.217010870715852,6.94137970143765,4.21061765824673,6.69696475848885,5.67053131240302,6.42389104270976,6.79235371325885,8.83230340241602,7.40102198439286,10.5300166104335,16.6861587546847,15.369642391746,15.6078271726466,6.89491361473237,5.80936215225443,4.06279459783025,7.9061782607894,9.82462140208245,10.3372802844739,8.26426509401437,10.269728866435,8.31138263538754,12.8642007072819,14.5608470063791,12.7867425159808,4.06292934080018,2.8369261234557,3.11411124497787,14.5724225848911,11.9941071236646,16.723541042294,3.02699751316684,4.41933163185078,2.84816148696796,1.26753171787165,2.76385589954557,1.46761051855863,1.57260083605093,1.35159203557356,0.64290234678832,0.855038231223746,0.59675003159727,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.58030450865046,0,0,0,1.5046784585161,0.32592226663359,0,0,2.56244050835899,0,0.221533894583621,0.812411591295047,2.30564375506215,2.73124629875744,3.78207180588455,3.86890024900188,4.63684937176084,0.296573126324121,0,0,3.39928028092699,0,0,0.506039384039006,0.637130828648193,0.651083453856419,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,9.41187441598582,9.40300581416043,5.31831842075461,0.476981248610684,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,9.60246323740849,14.9762729689112,6.53977114070404,0,0,0,0,0,0,2.46331618947972,2.90559832243646,2.90259361757081,4.17947864909188,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,4.01805673145701,4.21667878966063,0,0,0,0,0.410952645100767,0,0.112085143993527,0.788123040807709,1.50939302401662,3.7219480521127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,2.53723804616085,0.764637207142375,0,0.714695326373367,1.23408681925858,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,1.1974762285969,2.8725805519855,1.90506224451495,0.324621940274555,6.45833509660955,0.456469358066384,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0.390776190804081,0,0,0,0,4.22961015263549,0,1.75809815126273,0,0.780103689942349,0,0,0,0,0.994147647766298,0.844016498463076,0,0.988823245360557,0,0.398495976502139,0.828851746593443,0,0,0.123084805461069,0,0,0,0,0.394573622547734,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.08536794762867,0,0.331737779793674,0,0.658156191461918,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0.183195186803725,1.06606955203727,0,0.156980256395025,1.32969345520125,0,0,0,0,0.317873157960757,0,0,0,0,0,0.353830258013357,0,0,0,0,3.70706231393724,0.802577647298789,0.702793337176017,0,0,0,0,1.20990716048664,0,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.484945082442097,0,0,0,0,1.2029051231617,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,2.46429682005587,1.27746588066972,0,0.525774708558629,0.279282401272254,0.229160424011684,0.717873024576814,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0.508039992394707,0.795229689809303,0.953423842781029,0,0,0,4.27450393947851,3.86900977278975,0.971992906528395,0,2.75819975547194,1.10154635083496,0,0,0,0.714695326373367,0,0,0,0,0,0,0.738832686744051,0,0,0.293104467356165,0,1.55139547633861,1.05786081394152,0,0,1.28144895081234,0.78602152549833,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0,0,0.610131324509816,1.8778639605975,1.14681839138014,1.10929051536852,1.92498849118289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.974301544196942,0.797189041880179,0.327130788511688,0,0,0,2.59983614611409,0,3.78872955253794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02766760154335,0,2.23487402680012,0.615349092722265,0,0.899044282034833,1.61475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.607838261565552,0,0.620060389503552,1.71222687523548,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.443511850813194,0.806637912890455,0,1.2914249265598,1.77586488619693,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.971421986118279,0,0,0,0,0,0,0.154348316215889,0,0,0.4902966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| ||
|short_description=p8@HAVCR2 | |||
}} | }} |
Latest revision as of 13:22, 16 September 2015
Short description: | p8@HAVCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HAVCR2_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 0bp_to_ENST00000522902_5end |
EntrezGene: | HAVCR2 |
HGNC: | 18437 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.20e-76 | 67 |
myeloid leukocyte | 7.60e-70 | 72 |
myeloid lineage restricted progenitor cell | 2.02e-69 | 66 |
macrophage dendritic cell progenitor | 8.84e-68 | 61 |
monopoietic cell | 1.62e-64 | 59 |
monocyte | 1.62e-64 | 59 |
monoblast | 1.62e-64 | 59 |
promonocyte | 1.62e-64 | 59 |
defensive cell | 4.88e-63 | 48 |
phagocyte | 4.88e-63 | 48 |
myeloid cell | 2.87e-57 | 108 |
common myeloid progenitor | 2.87e-57 | 108 |
classical monocyte | 1.33e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.33e-52 | 42 |
leukocyte | 2.96e-41 | 136 |
hematopoietic lineage restricted progenitor cell | 3.14e-41 | 120 |
hematopoietic stem cell | 8.76e-40 | 168 |
hematopoietic oligopotent progenitor cell | 2.04e-38 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-38 | 161 |
hematopoietic cell | 1.18e-36 | 177 |
nongranular leukocyte | 8.39e-34 | 115 |
macrophage | 9.77e-12 | 6 |
mast cell | 9.22e-09 | 5 |
basophil mast progenitor cell | 9.22e-09 | 5 |
mesenchymal cell | 9.39e-09 | 354 |
connective tissue cell | 3.07e-08 | 361 |
immature conventional dendritic cell | 4.27e-08 | 5 |
common dendritic progenitor | 4.27e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.24e-70 | 76 |
bone element | 4.14e-64 | 82 |
hematopoietic system | 9.82e-63 | 98 |
blood island | 9.82e-63 | 98 |
immune system | 1.13e-60 | 93 |
hemolymphoid system | 6.35e-57 | 108 |
skeletal element | 9.22e-57 | 90 |
skeletal system | 4.42e-51 | 100 |
musculoskeletal system | 3.15e-23 | 167 |
lateral plate mesoderm | 5.42e-22 | 203 |
neural nucleus | 9.13e-10 | 9 |
nucleus of brain | 9.13e-10 | 9 |
mesoderm | 7.85e-09 | 315 |
mesoderm-derived structure | 7.85e-09 | 315 |
presumptive mesoderm | 7.85e-09 | 315 |
brainstem | 3.02e-08 | 6 |
neural tube | 4.36e-08 | 56 |
neural rod | 4.36e-08 | 56 |
future spinal cord | 4.36e-08 | 56 |
neural keel | 4.36e-08 | 56 |
connective tissue | 5.55e-08 | 371 |
regional part of nervous system | 7.47e-08 | 53 |
regional part of brain | 7.47e-08 | 53 |
telencephalic nucleus | 1.32e-07 | 7 |