FFCP PHASE1:Hg19::chr14:64676324..64676332,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=23224 | |EntrezGene=23224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=17084 | |HGNC=17084 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000554997_5end | |association_with_transcript=0bp_to_ENST00000554997_5end | ||
|cluster_id=chr14:64676324..64676332,+ | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_14_at_SYNE2_5end | |description=CAGE_peak_14_at_SYNE2_5end | ||
Latest revision as of 01:05, 25 September 2015
| Short description: | p14@SYNE2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_14_at_SYNE2_5end |
| Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
| Association with transcript: | 0bp_to_ENST00000554997_5end |
| EntrezGene: | SYNE2 |
| HGNC: | 17084 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p14@SYNE2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lower lobe of right lung | 2.16e-26 | 1 |
| right lung lobe | 2.16e-26 | 1 |
| lower lobe of lung | 2.16e-26 | 1 |
| lobe of lung | 2.16e-26 | 1 |
| right lung | 2.16e-26 | 1 |
| left cardiac atrium | 2.78e-26 | 1 |
| cardiac atrium | 7.30e-14 | 2 |
| future cardiac atrium | 7.30e-14 | 2 |
| lung | 6.70e-11 | 22 |
| respiratory tube | 6.70e-11 | 22 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| heart disease | 1.55e-13 | 2 |
| cardiovascular system disease | 2.04e-07 | 4 |
Showing 1 to 2 of 2 entries
