FFCP PHASE1:Hg19::chr6:44215668..44215690,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:44215668..44215690,+
|short_description=p13@HSP90AB1
|description=CAGE_peak_13_at_HSP90AB1_5end
|association_with_transcript=65bp_to_ENST00000371554_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3326 | |EntrezGene=3326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5258 | |HGNC=5258 | ||
|TSSclassifier=strong | |||
|UniProt=P08238 | |UniProt=P08238 | ||
|association_with_transcript=65bp_to_ENST00000371554_5end | |||
|cluster_id=chr6:44215668..44215690,+ | |||
|coexpression_cluster_id=C646 | |||
|description=CAGE_peak_13_at_HSP90AB1_5end | |||
|id=chr6:44215668..44215690,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.11e-15!70;CL:0000557!3.00e-15!71;CL:0000766!6.07e-14!76;CL:0000763!1.38e-13!112;CL:0000049!1.38e-13!112;CL:0002009!1.13e-12!65;CL:0002194!1.27e-12!63;CL:0000576!1.27e-12!63;CL:0000040!1.27e-12!63;CL:0000559!1.27e-12!63;CL:0000860!2.09e-12!45;CL:0002057!7.86e-12!42;CL:0002031!1.03e-08!124;CL:0000738!1.03e-08!140;CL:0002032!1.15e-08!165;CL:0000837!1.15e-08!165;CL:0000037!1.68e-08!172;CL:0000566!1.68e-08!172;CL:0000988!2.29e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.77e-52;33!CL:0002057;8.77e-52;33!CL:0000473;3.90e-37;39!CL:0000234;3.90e-37;39!CL:0000576;7.34e-24;48!CL:0000766;6.38e-20;69!CL:0000097;1.62e-14;5!CL:0000763;4.79e-09;100!CL:0000163;4.60e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.83e-43,42;CL:0002057,2.83e-43,42;CL:0000473,3.65e-37,48;CL:0000234,3.65e-37,48;CL:0000839,1.40e-36,66;CL:0000557,6.04e-36,67;CL:0000766,9.40e-36,72;CL:0002194,1.29e-28,59;CL:0000576,1.29e-28,59;CL:0000040,1.29e-28,59;CL:0000559,1.29e-28,59;CL:0002009,1.64e-27,61;CL:0000763,1.81e-27,108;CL:0000049,1.81e-27,108;CL:0000738,2.27e-17,136;CL:0002031,2.33e-17,120;CL:0002032,4.16e-16,161;CL:0000837,4.16e-16,161;CL:0000988,3.11e-15,177;CL:0000037,3.83e-15,168;CL:0000097,1.53e-14,5;CL:0002028,1.53e-14,5;CL:0002087,3.46e-12,115;CL:0000163,4.45e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-33;42!CL:0000049;1.60e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.17e-12!80;UBERON:0001474!5.07e-12!86;UBERON:0002390!1.15e-11!102;UBERON:0003061!1.15e-11!102;UBERON:0004765!2.19e-10!101;UBERON:0001434!2.19e-10!101;UBERON:0002193!6.31e-10!112;UBERON:0002405!2.02e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.92e-09;2!UBERON:0002757;7.92e-09;2!UBERON:0010134;7.92e-09;2!UBERON:0005408;7.92e-09;2!UBERON:0001899;7.92e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.62e-31,76;UBERON:0002390,6.09e-29,98;UBERON:0003061,6.09e-29,98;UBERON:0002405,1.51e-28,93;UBERON:0001474,2.90e-28,82;UBERON:0002193,1.25e-25,108;UBERON:0004765,3.31e-25,90;UBERON:0001434,4.55e-22,100;UBERON:0002204,6.36e-13,167;UBERON:0003081,1.87e-12,203;UBERON:0001905,1.19e-08,2;UBERON:0002757,1.19e-08,2;UBERON:0010134,1.19e-08,2;UBERON:0005408,1.19e-08,2;UBERON:0001899,1.19e-08,2;UBERON:0000926,1.86e-07,315;UBERON:0004120,1.86e-07,315;UBERON:0006603,1.86e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.458480434487708,0.246301768349837,0.157421562627358,1.18009283054671,0.767658796194425,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.223915474239924,0.32389366601898,0.515151135268373,0.436194716338694,0.377875943688809,1.94067248950253,1.62700325833979,2.05583944010913,2.16794459626573,2.01384674625505,2.0492856522328,4.02019790810595,2.41321976515633,4.51839278508678,8.12558919566051,0.188242339542605,0,3.82029923556644,0.306083892370903,2.88836124368484,2.55734850319616,0.329851300186716,1.19678194572979,1.27867425159808,1.16083695451434,2.26954089876456,0.622822248995575,3.26623264833766,4.17186334736161,2.38907729175628,0.605399502633369,1.84138817993782,3.48108626184973,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.654895377488563,0,0,0.97364218096405,0.522389211897802,0.26591592103773,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.506522046658319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0,0.505008341862199,0,0,0,0.30648779579902,0,0.340296549480063,0.179389635688862,0,0,0,0,0,0,0.506328996723799,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0.518305275076852,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.539325232640658,1.17732879075208,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0.570762456703795,0,0,0.246217006087397,0,0.594524649154913,0,0,0.141775097242386,0.179117045405697,0,0,5.41929561685538,0.616339038092582,5.59785911960085,3.747118788841,4.54472760334968,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.197030760201927,0.862510299438069,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0,0.106727557803444,0.606255142892519,0,0,0,0.306923946576125,0,0.128139149255701,0,0.321707842287215,0,0,0,0.410635780069046,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,1.13345112812495,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0,0.808729926293264,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,1.7887322147588,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.284567373393656,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0.500547425135725,0.586164286206121,0.278406173895242,1.23087398947712,0.270455678475983,0,0,0,0.146508179271894,0.606802608747567,0.445773537109913,0,0.23874448473769,0,0,0,0.703347082052564,0.111308705022906,0.329607748453519,0,0.796991953004279,0,0.251932747854276,0.818149460017238,0.984678443688556,0.311039587661807,0,0,0,0.789147245095469,0,0,0,0.185536196323703,0,0,0.0874599999961957,0.724999575434793,0,0.254253650292766,0,0,0,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0.533034776018635,0,0.31396051279005,0.332423363800313,0.225595660617181,0.392125068635479,0.167821586975843,1.13852239634511,0,0.210998064528027,0,0,0,0,0,0,1.48260564340311,0.247127877893006,0.626531697032732,0.404406797884062,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0.189559738885464,0.150323419414493,0.414752765588989,0,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0.195984794828755,0,0.34945333648406,0,0.483781656445426,0.0730893170861856,0.164230914106418,0.193978032976839,0.0882561266915003,1.12990370390266,0,0.794858446811959,0.126621591911757,0.195551382734803,0,0,0,0.144090417154106,0.114536596165916,0.171594997861965,0,0.621262677827163,0,0.407712618220842,0.418411385249333,0.611989305817931,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0.335917362433631,0,0,0.236349546921671,0.247247575143499,0.337017719270924,0,0,0,0.136203406111576,0,0.275078873194468,0,0,0.77380195455795,0.485996453264197,0,0.0788057072991982,0.524545881349981,0.105600336519406,0,0,0.71469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| ||
|short_description=p13@HSP90AB1 | |||
}} | }} |
Latest revision as of 00:03, 19 September 2015
Short description: | p13@HSP90AB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_HSP90AB1_5end |
Coexpression cluster: | C646_CD14_Mast_vagina_thymus_MCF7_immature_Eosinophils |
Association with transcript: | 65bp_to_ENST00000371554_5end |
EntrezGene: | HSP90AB1 |
HGNC: | 5258 |
UniProt: | P08238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.83e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-43 | 42 |
defensive cell | 3.65e-37 | 48 |
phagocyte | 3.65e-37 | 48 |
myeloid lineage restricted progenitor cell | 1.40e-36 | 66 |
granulocyte monocyte progenitor cell | 6.04e-36 | 67 |
myeloid leukocyte | 9.40e-36 | 72 |
monopoietic cell | 1.29e-28 | 59 |
monocyte | 1.29e-28 | 59 |
monoblast | 1.29e-28 | 59 |
promonocyte | 1.29e-28 | 59 |
macrophage dendritic cell progenitor | 1.64e-27 | 61 |
myeloid cell | 1.81e-27 | 108 |
common myeloid progenitor | 1.81e-27 | 108 |
leukocyte | 2.27e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.33e-17 | 120 |
hematopoietic oligopotent progenitor cell | 4.16e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.16e-16 | 161 |
hematopoietic cell | 3.11e-15 | 177 |
hematopoietic stem cell | 3.83e-15 | 168 |
mast cell | 1.53e-14 | 5 |
basophil mast progenitor cell | 1.53e-14 | 5 |
nongranular leukocyte | 3.46e-12 | 115 |
endocrine cell | 4.45e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.62e-31 | 76 |
hematopoietic system | 6.09e-29 | 98 |
blood island | 6.09e-29 | 98 |
immune system | 1.51e-28 | 93 |
bone element | 2.90e-28 | 82 |
hemolymphoid system | 1.25e-25 | 108 |
skeletal element | 3.31e-25 | 90 |
skeletal system | 4.55e-22 | 100 |
musculoskeletal system | 6.36e-13 | 167 |
lateral plate mesoderm | 1.87e-12 | 203 |
pineal body | 1.19e-08 | 2 |
regional part of epithalamus | 1.19e-08 | 2 |
secretory circumventricular organ | 1.19e-08 | 2 |
circumventricular organ | 1.19e-08 | 2 |
epithalamus | 1.19e-08 | 2 |
mesoderm | 1.86e-07 | 315 |
mesoderm-derived structure | 1.86e-07 | 315 |
presumptive mesoderm | 1.86e-07 | 315 |