FFCP PHASE1:Hg19::chr7:139477913..139477929,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:139477913..139477929,-
|short_description=p3@HIPK2
|description=CAGE_peak_3_at_HIPK2_5end
|association_with_transcript=-220bp_to_NM_001113239,NM_022740_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=28996 | |EntrezGene=28996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14402 | |HGNC=14402 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2X6 | |UniProt=Q9H2X6 | ||
|association_with_transcript=-220bp_to_NM_001113239,NM_022740_5end | |||
|cluster_id=chr7:139477913..139477929,- | |||
|coexpression_cluster_id=C4657 | |||
|description=CAGE_peak_3_at_HIPK2_5end | |||
|id=chr7:139477913..139477929,- | |||
|ontology_enrichment_celltype=CL:0000860!1.58e-08!45;CL:0002057!3.67e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.05e-10;33!CL:0002057;3.05e-10;33!CL:0000473;2.40e-07;39!CL:0000234;2.40e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.83e-09,42;CL:0002057,9.83e-09,42;CL:0000473,3.98e-07,48;CL:0000234,3.98e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;3.43e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;8.98e-12;41!UBERON:0001890;8.98e-12;41!UBERON:0001893;4.82e-11;34!UBERON:0003528;1.62e-10;34!UBERON:0002020;1.62e-10;34!UBERON:0002791;2.61e-10;32!UBERON:0001869;3.58e-10;32!UBERON:0000073;3.63e-10;53!UBERON:0002616;3.63e-10;53!UBERON:0001950;4.39e-09;20!UBERON:0002619;6.86e-09;22!UBERON:0007023;7.58e-08;114!UBERON:0000125;1.45e-07;9!UBERON:0002308;1.45e-07;9!UBERON:0000956;2.24e-07;25!UBERON:0000203;2.24e-07;25!UBERON:0002420;2.52e-07;9!UBERON:0007245;2.52e-07;9!UBERON:0010009;2.52e-07;9!UBERON:0010011;2.52e-07;9!UBERON:0000454;2.52e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.82e-29,114;UBERON:0001049,4.35e-19,56;UBERON:0005068,4.35e-19,56;UBERON:0006241,4.35e-19,56;UBERON:0007135,4.35e-19,56;UBERON:0000073,1.93e-17,53;UBERON:0002616,1.93e-17,53;UBERON:0002780,3.63e-16,41;UBERON:0001890,3.63e-16,41;UBERON:0003080,3.63e-16,41;UBERON:0006240,3.63e-16,41;UBERON:0003075,8.82e-15,82;UBERON:0007284,8.82e-15,82;UBERON:0002346,7.44e-13,86;UBERON:0003528,9.83e-13,34;UBERON:0002020,9.83e-13,34;UBERON:0001893,1.14e-12,34;UBERON:0000955,1.24e-12,68;UBERON:0006238,1.24e-12,68;UBERON:0002791,1.91e-11,32;UBERON:0003056,2.12e-11,61;UBERON:0001869,2.49e-11,32;UBERON:0010371,1.11e-10,104;UBERON:0001017,2.80e-10,81;UBERON:0001950,3.64e-09,20;UBERON:0004111,5.71e-09,240;UBERON:0002619,5.86e-09,22;UBERON:0001016,9.68e-09,89;UBERON:0010314,2.50e-08,132;UBERON:0000956,1.65e-07,25;UBERON:0000203,1.65e-07,25;UBERON:0000922,1.72e-07,592;UBERON:0000125,1.92e-07,9;UBERON:0002308,1.92e-07,9;UBERON:0000025,2.89e-07,192;UBERON:0002420,2.96e-07,9;UBERON:0007245,2.96e-07,9;UBERON:0010009,2.96e-07,9;UBERON:0010011,2.96e-07,9;UBERON:0000454,2.96e-07,9;UBERON:0005423,3.56e-07,581 | |||
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| ||
|short_description=p3@HIPK2 | |||
}} | }} |
Latest revision as of 16:56, 16 September 2015
Short description: | p3@HIPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HIPK2_5end |
Coexpression cluster: | C4657_corpus_globus_optic_thalamus_medulla_locus_substantia |
Association with transcript: | -220bp_to_NM_001113239, NM_022740_5end |
EntrezGene: | HIPK2 |
HGNC: | 14402 |
UniProt: | Q9H2X6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.83e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.83e-09 | 42 |
defensive cell | 3.98e-07 | 48 |
phagocyte | 3.98e-07 | 48 |