FFCP PHASE1:Hg19::chr10:26720077..26720082,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:26720077..26720082,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr10:26720077..26720082,+ | |||
|id=chr10:26720077..26720082,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.58e-106!42;CL:0000860!1.37e-98!45;CL:0000766!8.59e-71!76;CL:0002194!1.77e-66!63;CL:0000576!1.77e-66!63;CL:0000040!1.77e-66!63;CL:0000559!1.77e-66!63;CL:0002009!3.57e-64!65;CL:0000839!5.56e-59!70;CL:0000557!4.98e-58!71;CL:0000738!5.50e-46!140;CL:0000763!6.34e-45!112;CL:0000049!6.34e-45!112;CL:0002087!2.06e-43!119;CL:0002031!3.65e-39!124;CL:0002032!1.33e-35!165;CL:0000837!1.33e-35!165;CL:0000037!2.08e-35!172;CL:0000566!2.08e-35!172;CL:0000988!7.31e-33!182;CL:0002393!3.05e-17!9;CL:0002397!3.05e-17!9;CL:0000134!2.70e-11!358;CL:0002320!7.21e-11!365;CL:0000094!1.38e-10!8;CL:0000219!2.26e-09!390;CL:0000081!1.32e-07!11;CL:0000048!1.36e-07!430;CL:0000723!2.43e-07!436;CL:0000034!5.12e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.02e-93;33!CL:0002057;3.02e-93;33!CL:0000473;2.99e-63;39!CL:0000234;2.99e-63;39!CL:0000576;3.09e-42;48!CL:0000766;5.62e-28;69!CL:0000763;8.63e-16;100!CL:0002087;6.04e-12;104!CL:0000738;8.25e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.91e-85,42;CL:0002057,3.91e-85,42;CL:0000473,4.68e-74,48;CL:0000234,4.68e-74,48;CL:0002194,1.54e-58,59;CL:0000576,1.54e-58,59;CL:0000040,1.54e-58,59;CL:0000559,1.54e-58,59;CL:0000766,4.98e-57,72;CL:0002009,1.55e-56,61;CL:0000839,4.75e-52,66;CL:0000557,3.13e-51,67;CL:0000763,5.84e-37,108;CL:0000049,5.84e-37,108;CL:0000738,1.26e-28,136;CL:0002087,1.61e-28,115;CL:0002031,3.47e-27,120;CL:0002032,1.31e-23,161;CL:0000837,1.31e-23,161;CL:0000037,1.80e-22,168;CL:0000988,3.89e-21,177;CL:0000134,1.45e-08,354;CL:0002320,2.56e-08,361;CL:0000219,1.91e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.64e-64;42!CL:0000049;2.28e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.28e-55!102;UBERON:0003061!1.28e-55!102;UBERON:0002193!2.66e-52!112;UBERON:0002371!1.61e-50!80;UBERON:0001474!2.23e-46!86;UBERON:0004765!3.70e-38!101;UBERON:0001434!3.70e-38!101;UBERON:0002405!1.97e-34!115;UBERON:0003081!8.33e-21!216;UBERON:0002204!1.76e-19!167;UBERON:0002384!2.74e-10!375;UBERON:0000178!4.53e-10!15;UBERON:0000179!4.53e-10!15;UBERON:0000463!4.53e-10!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.02e-45,76;UBERON:0001474,2.55e-41,82;UBERON:0002390,6.21e-41,98;UBERON:0003061,6.21e-41,98;UBERON:0004765,2.29e-37,90;UBERON:0002193,7.84e-37,108;UBERON:0002405,4.66e-36,93;UBERON:0001434,2.65e-33,100;UBERON:0002204,1.59e-18,167;UBERON:0003081,7.18e-18,203;UBERON:0000926,4.28e-10,315;UBERON:0004120,4.28e-10,315;UBERON:0006603,4.28e-10,315;UBERON:0002384,5.57e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,1.40381113229099,0.651032612147555,0,0,0,1.01778767145695,1.13362783106643,0.485168122375632,2.09186133215116,0.411167888021826,1.54853185447552,8.05538698502021,3.07392847834921,8.51336027598907,3.10271112662957,1.29096936716765,1.35426486594342,1.50593871634084,0.545812300115692,0.674170453335254,2.14258724659632,0.962787081228281,1.91801137739712,0.659702600373432,1.39624560335142,1.70489900213078,0.580418477257168,0,0.622822248995575,7.78870862295904,3.65038042894141,7.16723187526885,1.21079900526674,2.57794345191295,2.21523671208619,0.845021145247767,0.212604299965044,0,0,0.300353785683013,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,2.24702107184155,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0.822724546172388,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:26720077..26720082,+ | |||
}} |
Latest revision as of 12:49, 23 July 2015
Short description: | p@chr10:26720077..26720082, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:26720077..26720082, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.91e-85 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.91e-85 | 42 |
defensive cell | 4.68e-74 | 48 |
phagocyte | 4.68e-74 | 48 |
monopoietic cell | 1.54e-58 | 59 |
monocyte | 1.54e-58 | 59 |
monoblast | 1.54e-58 | 59 |
promonocyte | 1.54e-58 | 59 |
myeloid leukocyte | 4.98e-57 | 72 |
macrophage dendritic cell progenitor | 1.55e-56 | 61 |
myeloid lineage restricted progenitor cell | 4.75e-52 | 66 |
granulocyte monocyte progenitor cell | 3.13e-51 | 67 |
myeloid cell | 5.84e-37 | 108 |
common myeloid progenitor | 5.84e-37 | 108 |
leukocyte | 1.26e-28 | 136 |
nongranular leukocyte | 1.61e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 3.47e-27 | 120 |
hematopoietic oligopotent progenitor cell | 1.31e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-23 | 161 |
hematopoietic stem cell | 1.80e-22 | 168 |
hematopoietic cell | 3.89e-21 | 177 |
mesenchymal cell | 1.45e-08 | 354 |
connective tissue cell | 2.56e-08 | 361 |
motile cell | 1.91e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.02e-45 | 76 |
bone element | 2.55e-41 | 82 |
hematopoietic system | 6.21e-41 | 98 |
blood island | 6.21e-41 | 98 |
skeletal element | 2.29e-37 | 90 |
hemolymphoid system | 7.84e-37 | 108 |
immune system | 4.66e-36 | 93 |
skeletal system | 2.65e-33 | 100 |
musculoskeletal system | 1.59e-18 | 167 |
lateral plate mesoderm | 7.18e-18 | 203 |
mesoderm | 4.28e-10 | 315 |
mesoderm-derived structure | 4.28e-10 | 315 |
presumptive mesoderm | 4.28e-10 | 315 |
connective tissue | 5.57e-08 | 371 |