FFCP PHASE1:Hg19::chr10:35484804..35484902,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1390 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2352 | |||
|TSSclassifier=strong | |||
|UniProt=E9PAR2,C9JZ10,A8K014,Q03060,A8K6A1,E9PAR4,E9PB41 | |||
|association_with_transcript=0bp_to_ENST00000344351,ENST00000468236,ENST00000474931,NM_182721,NM_182722,NM_182723,NM_182724,NM_182725,uc001iyp.2,uc001iyq.2,uc001iyr.2,uc001iys.2,uc001iyt.2_5end | |||
|cluster_id=chr10:35484804..35484902,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_CREM_5end | |||
|id=chr10:35484804..35484902,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.69e-19!76;CL:0000557!4.28e-18!71;CL:0002009!6.82e-18!65;CL:0000738!7.43e-18!140;CL:0002194!5.76e-17!63;CL:0000576!5.76e-17!63;CL:0000040!5.76e-17!63;CL:0000559!5.76e-17!63;CL:0000839!2.03e-16!70;CL:0000860!6.89e-16!45;CL:0002031!2.79e-15!124;CL:0002057!5.40e-15!42;CL:0002087!2.05e-14!119;CL:0002139!2.92e-08!24;CL:0002032!9.18e-07!165;CL:0000837!9.18e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.89e-17;33!CL:0002057;9.89e-17;33!CL:0000473;1.53e-16;39!CL:0000234;1.53e-16;39!CL:0000576;3.21e-09;48!CL:0000766;1.52e-08;69!CL:0002139;1.80e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.48e-19,72;CL:0000557,2.39e-18,67;CL:0000473,3.22e-18,48;CL:0000234,3.22e-18,48;CL:0002009,5.12e-18,61;CL:0000738,3.20e-17,136;CL:0002194,4.63e-17,59;CL:0000576,4.63e-17,59;CL:0000040,4.63e-17,59;CL:0000559,4.63e-17,59;CL:0000839,1.28e-16,66;CL:0000860,2.42e-15,42;CL:0002057,2.42e-15,42;CL:0002031,5.98e-15,120;CL:0002087,8.54e-14,115;CL:0002139,1.95e-08,24;CL:0002032,3.91e-07,161;CL:0000837,3.91e-07,161;CL:0000037,8.46e-07,168;CL:0000763,9.53e-07,108;CL:0000049,9.53e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.91e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.43e-18!112;UBERON:0002371!5.80e-17!80;UBERON:0002390!1.32e-16!102;UBERON:0003061!1.32e-16!102;UBERON:0001474!5.66e-16!86;UBERON:0003081!2.43e-15!216;UBERON:0002405!8.82e-15!115;UBERON:0004765!2.84e-14!101;UBERON:0001434!2.84e-14!101;UBERON:0007023!3.18e-14!115;UBERON:0002204!8.32e-14!167;UBERON:0001049!4.67e-08!57;UBERON:0005068!4.67e-08!57;UBERON:0006241!4.67e-08!57;UBERON:0007135!4.67e-08!57;UBERON:0002616!6.91e-08!59;UBERON:0003080!9.09e-08!42;UBERON:0001009!1.19e-07!113;UBERON:0002049!1.57e-07!79;UBERON:0007798!1.57e-07!79;UBERON:0004535!2.48e-07!110;UBERON:0002780!2.49e-07!41;UBERON:0001890!2.49e-07!41;UBERON:0006240!2.49e-07!41;UBERON:0000477!2.67e-07!286;UBERON:0004872!5.61e-07!84;UBERON:0000055!8.16e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,8.56e-20,93;UBERON:0002193,7.27e-18,108;UBERON:0003081,4.50e-17,203;UBERON:0002371,9.12e-17,76;UBERON:0002390,2.12e-16,98;UBERON:0003061,2.12e-16,98;UBERON:0001474,1.39e-15,82;UBERON:0004765,7.15e-15,90;UBERON:0001434,4.22e-14,100;UBERON:0007023,6.49e-14,114;UBERON:0002204,2.10e-13,167;UBERON:0000926,1.77e-10,315;UBERON:0004120,1.77e-10,315;UBERON:0006603,1.77e-10,315;UBERON:0001009,6.78e-08,112;UBERON:0002049,1.11e-07,78;UBERON:0007798,1.11e-07,78;UBERON:0001049,1.35e-07,56;UBERON:0005068,1.35e-07,56;UBERON:0006241,1.35e-07,56;UBERON:0007135,1.35e-07,56;UBERON:0004535,1.45e-07,109;UBERON:0002780,2.06e-07,41;UBERON:0001890,2.06e-07,41;UBERON:0003080,2.06e-07,41;UBERON:0006240,2.06e-07,41;UBERON:0000055,3.83e-07,68;UBERON:0004872,4.47e-07,83 | |||
|phase1_expression=1.81678379270557,0.856402095563933,4.65149533516705,1.0007329835313,2.68176656656373,3.48935409640147,0,3.79031924056099,0.783556884599516,1.47440361900905,0,0.436882744260345,0.263766978228454,8.41611200128317,4.97096063591874,12.7741777825837,10.8485015044316,5.84248072309899,12.1983199697627,0.861847406537515,0.204000691244253,0,2.0036519099174,2.18999080116615,1.75759695432724,2.90370941842215,2.21671591514854,2.67616656466509,8.65401409067589,4.22212337906934,1.39334510984468,0,0.6024118375565,0,5.73257284294232,1.9903692548239,0.880801318004542,1.66198622559563,1.40381113229099,1.73608696572681,10.3001118150365,6.47787332037959,7.46969146139141,7.56070841653736,9.44689859222024,3.39617685662943,29.9833457608333,34.5381025938334,45.2171301506851,151.901583146095,108.868300274868,149.456769289586,56.1935459600688,89.076886334568,47.3992703080196,39.530891303947,38.2068610080984,54.8325302046006,77.4392247698383,95.3159210415998,79.9171407248802,37.6030482212856,47.8712778291916,36.229103795279,16.8321358404579,26.0997203357924,24.2900677108274,124.368089302088,116.812173726125,140.52118252421,26.6375781158682,38.6691517786943,27.2157653199161,4.85887158517466,5.10250319916104,3.14487968262564,6.17807471305723,1.35159203557356,3.2145117339416,3.99017841237748,4.17725022118089,3.47061892152804,1.75996244461323,4.91524750135918,4.44754626931777,2.13365111283254,5.60554381850417,6.8970292794538,3.30522436392431,5.72432252721218,6.83055562931338,2.34894875748376,3.05818582500183,3.96513985737078,5.60508562981536,1.05353633910031,1.7703879310245,1.57204305099666,4.5232329779892,24.7436013178204,9.77766799900771,11.3627473376336,7.79306913631645,34.648652091289,17.6763544484902,14.8427709371026,17.331447280961,25.233989985958,24.1910386461374,18.4170453156117,16.8573510849367,15.0697604582227,6.67289534229272,6.1534390460634,5.22677619024884,13.2571930956152,9.58051234004803,15.1196076012357,14.1691027530922,6.68987370080603,3.25541726928209,0.950452044448374,3.91495309602209,2.43174561193395,4.99722906209383,4.2619905367923,4.92676798152628,2.21767417547206,2.13952156626806,1.88271725047639,0,14.75541891348,1.79007586580942,2.1686349143074,2.50668955317945,2.89693037921647,6.36228757640879,1.45990461090791,3.30871860074237,3.99112915432615,3.16205228495254,3.27447688744282,0,0,12.9818957461873,12.363211348248,10.2377629599526,4.29283123749616,4.57595928624102,1.48583000531826,7.7517338873015,6.02164216574287,7.63709103536707,7.34900324501212,7.1314904155684,4.95212475492121,6.06085402956751,19.639673696869,19.5671444477691,22.7610016679976,10.4735622448378,21.2876189601184,8.7862340717341,12.8682078121054,8.1014194788176,10.6266676658055,4.93964619777574,7.43235771189927,3.06633274931766,9.49265659568129,5.67925406184263,15.8136500923276,27.1446184903828,0,1.98788780678127,3.54565432660823,1.19168262731897,1.43418310374407,0.709336764396714,1.68203280042692,2.1349799145941,1.72667283892012,4.04574346019696,3.23305612967251,5.06731899651722,5.2975099675726,10.94734256512,0.70296429550139,3.43376084513353,1.71141546463335,2.83952493048422,1.17434498643765,1.13311061057692,1.12360645361799,7.55370433643105,3.80786383666481,3.20309921644873,7.12801714369232,0.989067717114227,0,0,3.53505839303539,4.25402967564678,5.26421819419948,0.877955241761676,1.22595118319608,3.00476117813194,5.44474479168101,0.89694817844431,0.640672166455702,2.11931901159562,0.900273288253207,2.88547081867629,0.515281080091258,0.744467425326359,0.337552664482532,0.68205903612839,1.00973509697646,1.56484827691909,2.42469085228218,0,0.806016785821122,1.52604533079439,0.386521706326594,0,0.573609190778008,0.487894824518382,0.132529768321485,0.348581828608555,0.725627385107593,0.252320850875628,0.36497735907583,3.12899064659632,0.643240938192885,0,3.25057549622385,2.88751792667834,4.37735160147422,2.69735504124963,3.13314338848527,4.74264082749294,3.26819166138609,4.98268300133303,9.16852895489118,6.47530834913642,6.54070166808864,1.4763109092493,0,0.4115740113314,2.94017422771084,0,6.87979051674338,6.49868897349544,0.441463099414651,0.368965315629341,4.63233087806019,0.109750285408626,0,0.301586917234893,1.20364978706088,0.325808305310325,0,7.21656710126366,2.08674728955138,2.11335649624479,15.4472099104349,17.5934494779112,13.5080448086565,0,0,16.0041053956808,13.806251643215,14.8631162288728,0,0.671928512795438,1.84307626415102,0.806026704325635,1.74380363108377,0.383382679165211,116.268524143443,1.40877494421162,15.9642648966394,4.61183850934277,17.6739406796932,8.12773046939764,2.67391897890794,4.68869788840188,0,4.62723717164956,4.20480280981484,8.28896654628677,6.61573397637628,4.79556075716608,18.0412183119537,1.16344544182,0,10.988935783228,2.12750493267896,2.08014873822732,0.771622122786426,1.41849132023278,1.0656887160644,4.28933980974443,1.62786481617433,0.823240336780769,7.81766842304964,2.84313558994037,2.37585561880029,5.72734816413214,7.84380112740265,3.99891964728228,18.2435670961786,14.0631985600995,10.54169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| |||
|short_description=p2@CREM | |||
}} |
Latest revision as of 01:53, 18 September 2015
Short description: | p2@CREM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CREM_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000344351, ENST00000468236, ENST00000474931, NM_182721, NM_182722, NM_182723, NM_182724, NM_182725, uc001iyp.2, uc001iyq.2, uc001iyr.2, uc001iys.2, uc001iyt.2_5end |
EntrezGene: | CREM |
HGNC: | 2352 |
UniProt: | E9PAR2C9JZ10A8K014Q03060A8K6A1E9PAR4E9PB41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.48e-19 | 72 |
granulocyte monocyte progenitor cell | 2.39e-18 | 67 |
defensive cell | 3.22e-18 | 48 |
phagocyte | 3.22e-18 | 48 |
macrophage dendritic cell progenitor | 5.12e-18 | 61 |
leukocyte | 3.20e-17 | 136 |
monopoietic cell | 4.63e-17 | 59 |
monocyte | 4.63e-17 | 59 |
monoblast | 4.63e-17 | 59 |
promonocyte | 4.63e-17 | 59 |
myeloid lineage restricted progenitor cell | 1.28e-16 | 66 |
classical monocyte | 2.42e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-15 | 42 |
hematopoietic lineage restricted progenitor cell | 5.98e-15 | 120 |
nongranular leukocyte | 8.54e-14 | 115 |
endothelial cell of vascular tree | 1.95e-08 | 24 |
hematopoietic oligopotent progenitor cell | 3.91e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.91e-07 | 161 |
hematopoietic stem cell | 8.46e-07 | 168 |
myeloid cell | 9.53e-07 | 108 |
common myeloid progenitor | 9.53e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
immune system | 8.56e-20 | 93 |
hemolymphoid system | 7.27e-18 | 108 |
lateral plate mesoderm | 4.50e-17 | 203 |
bone marrow | 9.12e-17 | 76 |
hematopoietic system | 2.12e-16 | 98 |
blood island | 2.12e-16 | 98 |
bone element | 1.39e-15 | 82 |
skeletal element | 7.15e-15 | 90 |
skeletal system | 4.22e-14 | 100 |
adult organism | 6.49e-14 | 114 |
musculoskeletal system | 2.10e-13 | 167 |
mesoderm | 1.77e-10 | 315 |
mesoderm-derived structure | 1.77e-10 | 315 |
presumptive mesoderm | 1.77e-10 | 315 |
circulatory system | 6.78e-08 | 112 |
vasculature | 1.11e-07 | 78 |
vascular system | 1.11e-07 | 78 |
neural tube | 1.35e-07 | 56 |
neural rod | 1.35e-07 | 56 |
future spinal cord | 1.35e-07 | 56 |
neural keel | 1.35e-07 | 56 |
cardiovascular system | 1.45e-07 | 109 |
regional part of forebrain | 2.06e-07 | 41 |
forebrain | 2.06e-07 | 41 |
anterior neural tube | 2.06e-07 | 41 |
future forebrain | 2.06e-07 | 41 |
vessel | 3.83e-07 | 68 |
splanchnic layer of lateral plate mesoderm | 4.47e-07 | 83 |