FFCP PHASE1:Hg19::chr11:45869019..45869044,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1408 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2385 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000473199,ENST00000496571,ENST00000532390_5end | |||
|cluster_id=chr11:45869019..45869044,+ | |||
|description=CAGE_peak_1_at_CRY2_5end | |||
|id=chr11:45869019..45869044,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.85e-12!140;CL:0000037!4.18e-10!172;CL:0000566!4.18e-10!172;CL:0000988!2.09e-09!182;CL:0002032!4.52e-09!165;CL:0000837!4.52e-09!165;CL:0002031!2.00e-08!124;CL:0000791!3.59e-07!18;CL:0000789!3.59e-07!18;CL:0002420!3.59e-07!18;CL:0002419!3.59e-07!18;CL:0000790!3.59e-07!18;CL:0002087!4.24e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.85e-07;18!CL:0000789;2.85e-07;18!CL:0002419;2.85e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.59e-13,136;CL:0000037,3.02e-11,168;CL:0000988,7.48e-11,177;CL:0002032,3.69e-10,161;CL:0000837,3.69e-10,161;CL:0002031,1.22e-09,120;CL:0002087,3.29e-08,115;CL:0000791,3.59e-07,18;CL:0000789,3.59e-07,18;CL:0002420,3.59e-07,18;CL:0002419,3.59e-07,18;CL:0000790,3.59e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.85e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-43!115;UBERON:0001049!5.19e-18!57;UBERON:0005068!5.19e-18!57;UBERON:0006241!5.19e-18!57;UBERON:0007135!5.19e-18!57;UBERON:0003080!1.31e-15!42;UBERON:0002780!2.47e-15!41;UBERON:0001890!2.47e-15!41;UBERON:0006240!2.47e-15!41;UBERON:0002616!2.65e-14!59;UBERON:0001893!1.94e-12!34;UBERON:0000955!3.05e-12!69;UBERON:0006238!3.05e-12!69;UBERON:0002020!3.40e-12!34;UBERON:0003528!3.40e-12!34;UBERON:0001017!4.33e-12!82;UBERON:0002791!5.81e-12!33;UBERON:0001869!8.19e-12!32;UBERON:0002619!5.21e-11!22;UBERON:0005743!1.06e-10!86;UBERON:0001950!3.10e-10!20;UBERON:0000073!4.79e-09!94;UBERON:0001016!4.79e-09!94;UBERON:0002346!6.14e-09!90;UBERON:0003075!8.74e-09!86;UBERON:0007284!8.74e-09!86;UBERON:0000956!1.27e-08!25;UBERON:0000203!1.27e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.77e-11;114!UBERON:0002780;3.25e-11;41!UBERON:0001890;3.25e-11;41!UBERON:0002619;5.19e-11;22!UBERON:0001869;9.12e-11;32!UBERON:0001893;9.13e-11;34!UBERON:0002791;1.34e-10;32!UBERON:0003528;1.45e-10;34!UBERON:0002020;1.45e-10;34!UBERON:0001950;3.12e-10;20!UBERON:0000073;6.42e-10;53!UBERON:0002616;6.42e-10;53!UBERON:0000956;1.17e-08;25!UBERON:0000203;1.17e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.56e-43,114;UBERON:0001049,1.00e-17,56;UBERON:0005068,1.00e-17,56;UBERON:0006241,1.00e-17,56;UBERON:0007135,1.00e-17,56;UBERON:0000073,6.95e-17,53;UBERON:0002616,6.95e-17,53;UBERON:0002780,2.47e-15,41;UBERON:0001890,2.47e-15,41;UBERON:0003080,2.47e-15,41;UBERON:0006240,2.47e-15,41;UBERON:0001893,1.94e-12,34;UBERON:0003528,3.40e-12,34;UBERON:0002020,3.40e-12,34;UBERON:0000955,5.62e-12,68;UBERON:0006238,5.62e-12,68;UBERON:0001017,7.84e-12,81;UBERON:0001869,8.19e-12,32;UBERON:0002791,1.37e-11,32;UBERON:0002619,5.21e-11,22;UBERON:0001950,3.10e-10,20;UBERON:0001016,5.84e-10,89;UBERON:0002346,2.20e-09,86;UBERON:0003075,3.04e-09,82;UBERON:0007284,3.04e-09,82;UBERON:0000956,1.27e-08,25;UBERON:0000203,1.27e-08,25 | |||
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| |||
|short_description=p1@CRY2 | |||
}} |
Latest revision as of 01:28, 18 September 2015
Short description: | p1@CRY2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRY2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000473199, ENST00000496571, ENST00000532390_5end |
EntrezGene: | CRY2 |
HGNC: | 2385 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.59e-13 | 136 |
hematopoietic stem cell | 3.02e-11 | 168 |
hematopoietic cell | 7.48e-11 | 177 |
hematopoietic oligopotent progenitor cell | 3.69e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.69e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 1.22e-09 | 120 |
nongranular leukocyte | 3.29e-08 | 115 |
mature alpha-beta T cell | 3.59e-07 | 18 |
alpha-beta T cell | 3.59e-07 | 18 |
immature T cell | 3.59e-07 | 18 |
mature T cell | 3.59e-07 | 18 |
immature alpha-beta T cell | 3.59e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.56e-43 | 114 |
neural tube | 1.00e-17 | 56 |
neural rod | 1.00e-17 | 56 |
future spinal cord | 1.00e-17 | 56 |
neural keel | 1.00e-17 | 56 |
regional part of nervous system | 6.95e-17 | 53 |
regional part of brain | 6.95e-17 | 53 |
regional part of forebrain | 2.47e-15 | 41 |
forebrain | 2.47e-15 | 41 |
anterior neural tube | 2.47e-15 | 41 |
future forebrain | 2.47e-15 | 41 |
telencephalon | 1.94e-12 | 34 |
brain grey matter | 3.40e-12 | 34 |
gray matter | 3.40e-12 | 34 |
brain | 5.62e-12 | 68 |
future brain | 5.62e-12 | 68 |
central nervous system | 7.84e-12 | 81 |
cerebral hemisphere | 8.19e-12 | 32 |
regional part of telencephalon | 1.37e-11 | 32 |
regional part of cerebral cortex | 5.21e-11 | 22 |
neocortex | 3.10e-10 | 20 |
nervous system | 5.84e-10 | 89 |
neurectoderm | 2.20e-09 | 86 |
neural plate | 3.04e-09 | 82 |
presumptive neural plate | 3.04e-09 | 82 |
cerebral cortex | 1.27e-08 | 25 |
pallium | 1.27e-08 | 25 |