FFCP PHASE1:Hg19::chr11:85780889..85780936,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8301 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15514 | |||
|TSSclassifier=strong | |||
|UniProt=E9PN05,B4DTM3,Q13492 | |||
|association_with_transcript=0bp_to_ENST00000528398,NM_001206947,uc010rtl.1_5end | |||
|cluster_id=chr11:85780889..85780936,- | |||
|description=CAGE_peak_4_at_PICALM_5end | |||
|id=chr11:85780889..85780936,- | |||
|ontology_enrichment_celltype=CL:0000766!1.30e-28!76;CL:0002194!5.51e-24!63;CL:0000576!5.51e-24!63;CL:0000040!5.51e-24!63;CL:0000559!5.51e-24!63;CL:0000557!1.07e-23!71;CL:0002009!2.45e-23!65;CL:0000839!2.77e-23!70;CL:0000860!7.11e-21!45;CL:0000763!7.82e-20!112;CL:0000049!7.82e-20!112;CL:0002057!1.31e-19!42;CL:0000063!3.57e-17!578;CL:0000548!5.87e-16!679;CL:0000004!5.87e-16!679;CL:0000255!5.87e-16!679;CL:0000012!1.10e-15!682;CL:0000134!8.80e-11!358;CL:0000003!1.40e-10!722;CL:0002320!8.00e-10!365;CL:0000144!1.01e-09!625;CL:0000219!9.27e-09!390;CL:0000048!2.57e-08!430;CL:0000723!3.44e-08!436;CL:0000034!1.05e-07!444;CL:0002371!1.35e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.34e-18;39!CL:0000234;1.34e-18;39!CL:0000860;2.77e-18;33!CL:0002057;2.77e-18;33!CL:0000766;1.15e-15;69!CL:0000576;2.17e-15;48!CL:0000763;1.38e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.30e-31,72;CL:0000473,7.46e-27,48;CL:0000234,7.46e-27,48;CL:0000557,2.36e-26,67;CL:0002194,5.51e-26,59;CL:0000576,5.51e-26,59;CL:0000040,5.51e-26,59;CL:0000559,5.51e-26,59;CL:0000839,7.21e-26,66;CL:0002009,1.37e-25,61;CL:0000860,7.06e-23,42;CL:0002057,7.06e-23,42;CL:0000763,2.29e-20,108;CL:0000049,2.29e-20,108;CL:0000134,9.90e-14,354;CL:0002320,2.27e-12,361;CL:0000219,9.59e-12,386;CL:0000723,2.16e-09,433;CL:0000048,2.50e-09,427;CL:0000034,2.07e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-16;42!CL:0000049;6.62e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:193;2.13e-07;29!DOID:120;2.90e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:193,2.12e-07,29;DOID:120,2.71e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-19!80;UBERON:0001474!1.47e-17!86;UBERON:0004765!3.67e-16!101;UBERON:0001434!3.67e-16!101;UBERON:0002390!9.54e-16!102;UBERON:0003061!9.54e-16!102;UBERON:0002193!6.68e-14!112;UBERON:0002405!1.01e-11!115;UBERON:0000926!4.08e-11!448;UBERON:0004120!4.08e-11!448;UBERON:0006603!4.08e-11!448;UBERON:0002384!5.94e-10!375;UBERON:0002204!4.16e-09!167;UBERON:0000062!2.26e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.53e-22,76;UBERON:0001474,1.11e-19,82;UBERON:0004765,5.59e-17,90;UBERON:0002390,1.28e-16,98;UBERON:0003061,1.28e-16,98;UBERON:0002405,2.72e-16,93;UBERON:0001434,4.27e-15,100;UBERON:0002193,2.29e-14,108;UBERON:0002384,6.65e-13,371;UBERON:0000926,5.58e-08,315;UBERON:0004120,5.58e-08,315;UBERON:0006603,5.58e-08,315;UBERON:0002204,3.34e-07,167 | |||
|phase1_expression=3.27021082687002,1.71280419112787,5.49722175974288,1.0007329835313,1.78784437770915,3.48935409640147,5.06599756336621,3.79031924056099,0.783556884599516,1.96587149201207,0,0.218441372130172,0.263766978228454,0.618831764800233,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.369363174230364,0.204000691244253,0.626909442956176,0,0.136874425072884,0.627713197974014,0.382067028739756,0.410502947249729,0.236132343941038,4.32700704533794,0.767658796194425,1.39334510984468,0,0.30120591877825,1.47901604066715,0.46480320348181,0.142169232487422,0.293600439334847,2.21598163412751,2.00544447470142,2.60413044859022,2.23915474239924,2.59114932815184,4.37878464978117,3.92575244704825,1.88937971844405,2.66842467306598,4.41615170120801,3.28934310417461,4.02618282163635,4.60307827715441,4.35473201099471,11.1146648047635,6.20542225325913,5.80936215225443,4.06279459783025,4.70605848856512,3.0019676506363,3.82029923556644,5.81559395504715,8.02322567690234,3.83602275479425,4.94776950280074,3.98927315243264,1.70489900213078,10.1573233520004,7.94339314567596,11.8336227309159,6.02996796616184,2.60741459210101,4.34377689410233,7.26479403160043,11.4166067156145,10.4432587855492,2.11255286311942,1.27562579979026,2.30624510059213,1.12328631146495,1.65194582125657,2.73233497385036,2.56511469367124,1.9891667719909,2.73996230646951,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0.767175371061182,1.80719576192283,1.50401373190767,2.17269778441236,0.795285947051099,1.45990461090791,0.850813354476611,0.665188192387692,1.14185221401064,0.392937226493138,0.364295288292542,0,0.649094787309367,0.870648686496336,0.664789802594326,0.238490624305342,0,0,1.19257444420023,0.860234595106124,0.694281003215189,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.71153252537342,1.00416183829401,0.402829317109147,0.760272105718513,0,0,0,0.267899184852239,0,0.450445921933289,0,0,0.183201743930407,7.9068250461638,7.75560528296651,0.436094052142534,2.48485975847659,0.886413581652058,1.58891016975863,1.72101972449288,2.83734705758686,0,0,1.2333377420858,0.933633106199299,0.942974704487816,0.817309515567294,0.302714855289863,0.576175924479999,0.937285727335186,3.1216007683032,1.71141546463335,2.24173020827702,1.05691048779388,1.29498355494505,1.26405726032024,2.04154171254893,1.35117749042945,1.13658359293342,0,0.989067717114227,1.82032272387605,1.43723628363248,1.68336113954066,0.750711119231785,1.93944880838928,0.438977620880838,0.612975591598039,1.20190447125277,1.47461838108027,2.15267562826634,1.49490172172997,2.7551147150743,1.50045548042201,1.54578793857658,1.54584324027377,1.11670113798954,2.53164498361899,2.92311015483596,1.51460264546469,2.76149695926898,1.45481451136931,0.355009592516614,3.22406714328449,1.52604533079439,1.15956511897978,1.36373060295417,2.29443676311203,0.487894824518382,0.927708378250397,0.348581828608555,0.725627385107593,0.504641701751257,0,3.12899064659632,0.643240938192885,0,0.928735856063958,0,2.83936320095625,2.19160097101532,2.6511213287183,1.98529150918309,3.05031221729369,2.13543557199987,2.56179485504312,2.94332197688019,1.92373578473195,0.738155454624648,0,0.4115740113314,0,2.53510069643662,0,0,0,2.33678033231916,2.40194934417936,1.64625428112938,1.1240175325762,1.3068766413512,1.38882667737794,0.325808305310325,0,0,0.34779121492523,1.6437217193015,0.288732895522148,0,1.14152491340759,0,0,5.66299114001014,8.19014927987332,3.56714789492948,0.93733833986777,1.6798212819886,2.26840155587818,4.11969204433102,2.90633938513962,0.383382679165211,6.89728533054321,2.0251139823042,1.4512968087854,2.16179930125442,2.14612136824846,1.39695367442772,0.381988425558278,0,0,1.13110241973656,0.600686115687835,0.285826432630578,1.23344192779897,0.87192013766656,4.8403268641827,4.39523833576444,0,0.845302752556,3.45719551560332,3.12022310734098,0,1.41849132023278,0,1.71573592389777,0.542621605391443,0.823240336780769,2.28015329005615,0.710783897485092,1.58390374586686,1.80863626235752,0.871533458600294,1.89948683245908,3.64871341923571,3.51579964002488,4.21667878966063,2.39624855491583,0,0,2.60606352001643,1.84928690295345,4.1184021545176,0,0.197030760201927,0,0.256686072559497,0.508189248444927,0,0,0.167516265334349,0,7.49007023947182,2.99161459204025,9.53155680902882,0.49076596687656,0.500170521059677,0.542530047399471,1.66376689224646,3.92543775353756,2.20783381047509,2.34282829985426,0.300946099727719,0,0,1.32845119707087,0.368738337083406,1.65078867489357,0.391602314925481,0,0.620304078368662,1.50999940573032,0.960548020230999,0.303127571446259,3.32870879020994,0.907170879989041,3.96972492510043,1.68808170616869,2.52594084989766,3.33161788064823,3.07024349440022,1.28683136914886,0,1.3878872442239,1.24293207719189,2.38168752440047,1.55776328755086,2.32420756919918,4.23008073570678,0.200506470303285,2.85451065701279,3.78887678943202,4.18809686415449,0.91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| |||
|short_description=p4@PICALM | |||
}} |
Latest revision as of 21:48, 24 September 2015
Short description: | p4@PICALM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PICALM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528398, NM_001206947, uc010rtl.1_5end |
EntrezGene: | PICALM |
HGNC: | 15514 |
UniProt: | E9PN05B4DTM3Q13492 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.30e-31 | 72 |
defensive cell | 7.46e-27 | 48 |
phagocyte | 7.46e-27 | 48 |
granulocyte monocyte progenitor cell | 2.36e-26 | 67 |
monopoietic cell | 5.51e-26 | 59 |
monocyte | 5.51e-26 | 59 |
monoblast | 5.51e-26 | 59 |
promonocyte | 5.51e-26 | 59 |
myeloid lineage restricted progenitor cell | 7.21e-26 | 66 |
macrophage dendritic cell progenitor | 1.37e-25 | 61 |
classical monocyte | 7.06e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.06e-23 | 42 |
myeloid cell | 2.29e-20 | 108 |
common myeloid progenitor | 2.29e-20 | 108 |
mesenchymal cell | 9.90e-14 | 354 |
connective tissue cell | 2.27e-12 | 361 |
motile cell | 9.59e-12 | 386 |
somatic stem cell | 2.16e-09 | 433 |
multi fate stem cell | 2.50e-09 | 427 |
stem cell | 2.07e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.53e-22 | 76 |
bone element | 1.11e-19 | 82 |
skeletal element | 5.59e-17 | 90 |
hematopoietic system | 1.28e-16 | 98 |
blood island | 1.28e-16 | 98 |
immune system | 2.72e-16 | 93 |
skeletal system | 4.27e-15 | 100 |
hemolymphoid system | 2.29e-14 | 108 |
connective tissue | 6.65e-13 | 371 |
mesoderm | 5.58e-08 | 315 |
mesoderm-derived structure | 5.58e-08 | 315 |
presumptive mesoderm | 5.58e-08 | 315 |
musculoskeletal system | 3.34e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 2.12e-07 | 29 |
female reproductive organ cancer | 2.71e-07 | 27 |