FFCP PHASE1:Hg19::chr12:10725588..10725591,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:10725588..10725591,+ | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr12:10725588..10725591,+ | |||
|id=chr12:10725588..10725591,+ | |||
|ontology_enrichment_celltype=CL:0000625!1.58e-21!11;CL:0000791!6.93e-15!18;CL:0000789!6.93e-15!18;CL:0002420!6.93e-15!18;CL:0002419!6.93e-15!18;CL:0000790!6.93e-15!18;CL:0000838!3.70e-14!52;CL:0000542!8.85e-14!53;CL:0000051!8.85e-14!53;CL:0000738!5.37e-12!140;CL:0000084!1.40e-11!25;CL:0000827!1.40e-11!25;CL:0002087!7.13e-11!119;CL:0000037!4.57e-10!172;CL:0000566!4.57e-10!172;CL:0002031!7.34e-10!124;CL:0000988!1.15e-09!182;CL:0002032!1.45e-08!165;CL:0000837!1.45e-08!165;CL:0000842!5.08e-08!3;CL:0000623!5.20e-08!3;CL:0000825!5.20e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.07e-68;11!CL:0000791;2.21e-50;18!CL:0000789;2.21e-50;18!CL:0002419;2.21e-50;18!CL:0000084;8.86e-36;25!CL:0000542;1.00e-13;53!CL:0000226;2.38e-11;3!CL:0000842;2.38e-11;3!CL:0000623;6.32e-11;3!CL:0002127;1.60e-09;1!CL:0000911;1.60e-09;1!CL:0000814;1.60e-09;1!CL:0002379;1.74e-09;1!CL:0000785;3.87e-09;1!CL:0000819;3.87e-09;1!CL:0002087;7.67e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.65e-69,11;CL:0000791,1.45e-50,18;CL:0000789,1.45e-50,18;CL:0002420,1.45e-50,18;CL:0002419,1.45e-50,18;CL:0000790,1.45e-50,18;CL:0000084,6.55e-36,25;CL:0000827,6.55e-36,25;CL:0000838,9.59e-27,52;CL:0000542,3.42e-26,53;CL:0000051,3.42e-26,53;CL:0002087,3.75e-16,115;CL:0000738,5.24e-15,136;CL:0002031,1.20e-11,120;CL:0000037,1.55e-11,168;CL:0000226,3.42e-11,3;CL:0000842,3.42e-11,3;CL:0000623,4.20e-11,3;CL:0000825,4.20e-11,3;CL:0000988,8.78e-11,177;CL:0002127,1.60e-09,1;CL:0000914,1.60e-09,1;CL:0000911,1.60e-09,1;CL:0000814,1.60e-09,1;CL:0002042,1.60e-09,1;CL:0002039,1.60e-09,1;CL:0002040,1.60e-09,1;CL:0002041,1.60e-09,1;CL:0002379,1.74e-09,1;CL:0002032,2.77e-09,161;CL:0000837,2.77e-09,161;CL:0000819,3.05e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.21e-50;18!CL:0000051;1.00e-13;53!UBERON:0005425;8.16e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;1.74e-09;1!DOID:3565;1.74e-09;1!DOID:0060073;3.87e-09;1!DOID:8675;3.87e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.74e-09,1;DOID:3565,1.74e-09,1;DOID:0060073,3.05e-09,1;DOID:8675,3.05e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.90e-07!15;UBERON:0000179!7.90e-07!15;UBERON:0000463!7.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.21e-09;1!UBERON:0000941;8.16e-09;1!UBERON:0001785;8.16e-09;1!UBERON:0002464;8.16e-09;1!UBERON:0004904;8.16e-09;1!UBERON:0001021;8.16e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.22e-09,1;UBERON:0000941,7.27e-09,1;UBERON:0001785,7.27e-09,1;UBERON:0002464,7.27e-09,1;UBERON:0004904,7.27e-09,1;UBERON:0001021,7.27e-09,1;UBERON:0003902,7.27e-09,1;UBERON:0005425,7.27e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,2.30297638858328,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.868043482863407,0.447830948479849,1.29557466407592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0.659702600373432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0.253019692019503,2.54852331459277,5.20866763085135,2.85135613334512,1.50575119077773,1.4078527226986,0,2.60454977248419,2.46338399076314,3.83052812126992,2.67440195783507,14.4824403882799,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.7463946379935,1.57624608161542,0.646882724578552,1.92514554419623,0.254094624222463,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.620304078368662,2.15714200818617,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,2.73682183823499,0,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.342173675768659,0,0.320362237703084,0,0,6.94632430536731,0.197611631897944,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0,0,0,0,0,18.5859997561556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0.26721740526556,0.275684698604535,0,0,0,0,0.103432995861895,0,0,0.258355639344024,0.558672428662721,0,0,0,0.217716747896961,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:10725588..10725591,+ | |||
}} |
Latest revision as of 04:30, 24 July 2015
Short description: | p@chr12:10725588..10725591, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:10725588..10725591, + |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 2.22e-09 | 1 |
cranial nerve II | 7.27e-09 | 1 |
cranial nerve | 7.27e-09 | 1 |
nerve trunk | 7.27e-09 | 1 |
nerve connecting eye with brain | 7.27e-09 | 1 |
nerve | 7.27e-09 | 1 |
retinal neural layer | 7.27e-09 | 1 |
presumptive neural retina | 7.27e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.74e-09 | 1 |
meningioma | 1.74e-09 | 1 |
lymphatic system cancer | 3.05e-09 | 1 |
lymphosarcoma | 3.05e-09 | 1 |