FFCP PHASE1:Hg19::chr12:12870294..12870324,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1027 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1785 | |||
|TSSclassifier=strong | |||
|UniProt=P46527,Q6I9V6 | |||
|association_with_transcript=0bp_to_NM_004064,uc001rat.2_5end | |||
|cluster_id=chr12:12870294..12870324,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_1_at_CDKN1B_5end | |||
|id=chr12:12870294..12870324,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.39e-17!140;CL:0002031!1.73e-12!124;CL:0002087!2.89e-12!119;CL:0000791!9.43e-12!18;CL:0000789!9.43e-12!18;CL:0002420!9.43e-12!18;CL:0002419!9.43e-12!18;CL:0000790!9.43e-12!18;CL:0002057!1.03e-09!42;CL:0000988!1.93e-09!182;CL:0000037!2.10e-09!172;CL:0000566!2.10e-09!172;CL:0000838!5.51e-09!52;CL:0000860!7.41e-09!45;CL:0000542!1.19e-08!53;CL:0000051!1.19e-08!53;CL:0000625!7.17e-08!11;CL:0002032!7.70e-08!165;CL:0000837!7.70e-08!165;CL:0000084!4.19e-07!25;CL:0000827!4.19e-07!25;CL:0000766!4.44e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.20e-12;18!CL:0000789;9.20e-12;18!CL:0002419;9.20e-12;18!CL:0000625;7.17e-08;11!CL:0000084;4.11e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.06e-18,136;CL:0002031,1.95e-13,120;CL:0002087,3.16e-13,115;CL:0000791,9.43e-12,18;CL:0000789,9.43e-12,18;CL:0002420,9.43e-12,18;CL:0002419,9.43e-12,18;CL:0000790,9.43e-12,18;CL:0000988,3.81e-10,177;CL:0000037,5.04e-10,168;CL:0000860,1.03e-09,42;CL:0002057,1.03e-09,42;CL:0000838,5.51e-09,52;CL:0000542,1.19e-08,53;CL:0000051,1.19e-08,53;CL:0002032,2.13e-08,161;CL:0000837,2.13e-08,161;CL:0000766,6.06e-08,72;CL:0000625,7.17e-08,11;CL:0000084,4.19e-07,25;CL:0000827,4.19e-07,25;CL:0000473,9.87e-07,48;CL:0000234,9.87e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;9.20e-12;18!CL:0002057;2.40e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.61e-31!115;UBERON:0001049!2.22e-14!57;UBERON:0005068!2.22e-14!57;UBERON:0006241!2.22e-14!57;UBERON:0007135!2.22e-14!57;UBERON:0002616!1.90e-11!59;UBERON:0005743!2.89e-11!86;UBERON:0001017!6.59e-11!82;UBERON:0003080!1.06e-10!42;UBERON:0000073!1.29e-10!94;UBERON:0001016!1.29e-10!94;UBERON:0002780!2.88e-10!41;UBERON:0001890!2.88e-10!41;UBERON:0006240!2.88e-10!41;UBERON:0000955!5.70e-10!69;UBERON:0006238!5.70e-10!69;UBERON:0001893!1.36e-08!34;UBERON:0002020!2.16e-08!34;UBERON:0003528!2.16e-08!34;UBERON:0002791!2.51e-08!33;UBERON:0002390!6.23e-08!102;UBERON:0003061!6.23e-08!102;UBERON:0001869!8.69e-08!32;UBERON:0002193!1.29e-07!112;UBERON:0003075!7.59e-07!86;UBERON:0007284!7.59e-07!86;UBERON:0002346!8.57e-07!90;UBERON:0000178!8.76e-07!15;UBERON:0000179!8.76e-07!15;UBERON:0000463!8.76e-07!15;UBERON:0002619!9.37e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.02e-08;114!UBERON:0000073;6.17e-08;53!UBERON:0002616;6.17e-08;53!UBERON:0002780;8.53e-08;41!UBERON:0001890;8.53e-08;41!UBERON:0001893;2.26e-07;34!UBERON:0002791;2.97e-07;32!UBERON:0001869;3.75e-07;32!UBERON:0003528;3.97e-07;34!UBERON:0002020;3.97e-07;34!UBERON:0000178;8.98e-07;15!UBERON:0000179;8.98e-07;15!UBERON:0000463;8.98e-07;15!UBERON:0002619;9.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.36e-31,114;UBERON:0001049,6.23e-14,56;UBERON:0005068,6.23e-14,56;UBERON:0006241,6.23e-14,56;UBERON:0007135,6.23e-14,56;UBERON:0000073,5.12e-13,53;UBERON:0002616,5.12e-13,53;UBERON:0001017,1.55e-10,81;UBERON:0002780,2.88e-10,41;UBERON:0001890,2.88e-10,41;UBERON:0003080,2.88e-10,41;UBERON:0006240,2.88e-10,41;UBERON:0001016,6.74e-10,89;UBERON:0000955,1.35e-09,68;UBERON:0006238,1.35e-09,68;UBERON:0002390,1.06e-08,98;UBERON:0003061,1.06e-08,98;UBERON:0001893,1.36e-08,34;UBERON:0003528,2.16e-08,34;UBERON:0002020,2.16e-08,34;UBERON:0002193,2.56e-08,108;UBERON:0003075,5.83e-08,82;UBERON:0007284,5.83e-08,82;UBERON:0002791,6.08e-08,32;UBERON:0002346,7.19e-08,86;UBERON:0001869,8.69e-08,32;UBERON:0000178,8.76e-07,15;UBERON:0000179,8.76e-07,15;UBERON:0000463,8.76e-07,15;UBERON:0002619,9.37e-07,22 | |||
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| |||
|short_description=p1@CDKN1B | |||
}} |
Latest revision as of 07:17, 17 September 2015
Short description: | p1@CDKN1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDKN1B_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 0bp_to_NM_004064, uc001rat.2_5end |
EntrezGene: | CDKN1B |
HGNC: | 1785 |
UniProt: | P46527Q6I9V6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.06e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 1.95e-13 | 120 |
nongranular leukocyte | 3.16e-13 | 115 |
mature alpha-beta T cell | 9.43e-12 | 18 |
alpha-beta T cell | 9.43e-12 | 18 |
immature T cell | 9.43e-12 | 18 |
mature T cell | 9.43e-12 | 18 |
immature alpha-beta T cell | 9.43e-12 | 18 |
hematopoietic cell | 3.81e-10 | 177 |
hematopoietic stem cell | 5.04e-10 | 168 |
classical monocyte | 1.03e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-09 | 42 |
lymphoid lineage restricted progenitor cell | 5.51e-09 | 52 |
lymphocyte | 1.19e-08 | 53 |
common lymphoid progenitor | 1.19e-08 | 53 |
hematopoietic oligopotent progenitor cell | 2.13e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.13e-08 | 161 |
myeloid leukocyte | 6.06e-08 | 72 |
CD8-positive, alpha-beta T cell | 7.17e-08 | 11 |
T cell | 4.19e-07 | 25 |
pro-T cell | 4.19e-07 | 25 |
defensive cell | 9.87e-07 | 48 |
phagocyte | 9.87e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.36e-31 | 114 |
neural tube | 6.23e-14 | 56 |
neural rod | 6.23e-14 | 56 |
future spinal cord | 6.23e-14 | 56 |
neural keel | 6.23e-14 | 56 |
regional part of nervous system | 5.12e-13 | 53 |
regional part of brain | 5.12e-13 | 53 |
central nervous system | 1.55e-10 | 81 |
regional part of forebrain | 2.88e-10 | 41 |
forebrain | 2.88e-10 | 41 |
anterior neural tube | 2.88e-10 | 41 |
future forebrain | 2.88e-10 | 41 |
nervous system | 6.74e-10 | 89 |
brain | 1.35e-09 | 68 |
future brain | 1.35e-09 | 68 |
hematopoietic system | 1.06e-08 | 98 |
blood island | 1.06e-08 | 98 |
telencephalon | 1.36e-08 | 34 |
brain grey matter | 2.16e-08 | 34 |
gray matter | 2.16e-08 | 34 |
hemolymphoid system | 2.56e-08 | 108 |
neural plate | 5.83e-08 | 82 |
presumptive neural plate | 5.83e-08 | 82 |
regional part of telencephalon | 6.08e-08 | 32 |
neurectoderm | 7.19e-08 | 86 |
cerebral hemisphere | 8.69e-08 | 32 |
blood | 8.76e-07 | 15 |
haemolymphatic fluid | 8.76e-07 | 15 |
organism substance | 8.76e-07 | 15 |
regional part of cerebral cortex | 9.37e-07 | 22 |