FFCP PHASE1:Hg19::chr14:93179177..93179188,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9472 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000557725_5end | |||
|cluster_id=chr14:93179177..93179188,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_6_at_LGMN_5end | |||
|id=chr14:93179177..93179188,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.62e-66;6!CL:0002619;1.53e-09;3!CL:0002580;1.53e-09;3!CL:0000473;4.82e-09;39!CL:0000234;4.82e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.67e-66,6;CL:0002194,1.36e-10,59;CL:0000576,1.36e-10,59;CL:0000040,1.36e-10,59;CL:0000559,1.36e-10,59;CL:0002009,2.94e-10,61;CL:0002580,1.54e-09,3;CL:0000839,1.66e-09,66;CL:0002619,1.67e-09,3;CL:0000557,2.27e-09,67;CL:0000766,9.66e-09,72;CL:0000473,9.76e-09,48;CL:0000234,9.76e-09,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!1.83e-07!12;UBERON:0000042!1.83e-07!12 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.69e-08,76;UBERON:0001474,1.04e-07,82;UBERON:0004765,4.83e-07,90;UBERON:0002405,8.02e-07,93 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.563817616383885,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11957737119962,0.971680998056939,0,0.290796477559129,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.449446968890169,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,1.0404181360211,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,8.51366464488333,9.5428847372104,18.9750545534728,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,1.12264037773229,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0,1.19271615249795,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0.512483037175893,0,0,0,0.194860308839388,0.132864840313363,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0,0.874238242015829,0,0,0,0,0,0,0.339854229375634,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0.224263725161227,0.12729431655633,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p6@LGMN | |||
}} |
Latest revision as of 15:20, 16 September 2015
Short description: | p6@LGMN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LGMN_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 0bp_to_ENST00000557725_5end |
EntrezGene: | LGMN |
HGNC: | 9472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.67e-66 | 6 |
monopoietic cell | 1.36e-10 | 59 |
monocyte | 1.36e-10 | 59 |
monoblast | 1.36e-10 | 59 |
promonocyte | 1.36e-10 | 59 |
macrophage dendritic cell progenitor | 2.94e-10 | 61 |
preadipocyte of the breast | 1.54e-09 | 3 |
myeloid lineage restricted progenitor cell | 1.66e-09 | 66 |
adult endothelial progenitor cell | 1.67e-09 | 3 |
granulocyte monocyte progenitor cell | 2.27e-09 | 67 |
myeloid leukocyte | 9.66e-09 | 72 |
defensive cell | 9.76e-09 | 48 |
phagocyte | 9.76e-09 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.69e-08 | 76 |
bone element | 1.04e-07 | 82 |
skeletal element | 4.83e-07 | 90 |
immune system | 8.02e-07 | 93 |