FFCP PHASE1:Hg19::chr8:21914348..21914361,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:21914348..21914361,+
|short_description=p5@EPB49
|description=CAGE_peak_5_at_EPB49_5end
|association_with_transcript=-54bp_to_ENST00000520174_5end
|Entrez...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2039 | |EntrezGene=2039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3382 | |HGNC=3382 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFK4 | |UniProt=E5RFK4 | ||
|association_with_transcript=-54bp_to_ENST00000520174_5end | |||
|cluster_id=chr8:21914348..21914361,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_5_at_EPB49_5end | |||
|id=chr8:21914348..21914361,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;2.09e-08;3!CL:0000764;2.18e-07;2!CL:0000558;2.18e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.70e-08,3;CL:0000764,2.18e-07,2;CL:0000765,2.18e-07,2;CL:0000050,2.18e-07,2;CL:0000038,2.18e-07,2;CL:0000558,2.18e-07,2;CL:0000547,2.18e-07,2;CL:0000549,2.18e-07,2;CL:0000550,2.18e-07,2;CL:0000552,2.18e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.12e-08;31!DOID:1036;1.13e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.72e-09,31;DOID:1036,8.42e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.15e-57!115;UBERON:0001049!2.69e-28!57;UBERON:0005068!2.69e-28!57;UBERON:0006241!2.69e-28!57;UBERON:0007135!2.69e-28!57;UBERON:0002780!2.79e-25!41;UBERON:0001890!2.79e-25!41;UBERON:0006240!2.79e-25!41;UBERON:0003080!1.88e-24!42;UBERON:0002616!2.26e-22!59;UBERON:0001893!4.20e-22!34;UBERON:0002020!7.55e-22!34;UBERON:0003528!7.55e-22!34;UBERON:0001017!1.28e-21!82;UBERON:0005743!3.51e-21!86;UBERON:0002791!6.94e-21!33;UBERON:0001869!1.97e-20!32;UBERON:0003075!2.62e-20!86;UBERON:0007284!2.62e-20!86;UBERON:0000955!8.88e-20!69;UBERON:0006238!8.88e-20!69;UBERON:0001950!3.23e-19!20;UBERON:0002619!4.22e-19!22;UBERON:0000073!8.13e-19!94;UBERON:0001016!8.13e-19!94;UBERON:0002346!8.25e-19!90;UBERON:0000956!3.41e-16!25;UBERON:0000203!3.41e-16!25;UBERON:0003056!4.42e-15!61;UBERON:0000178!7.07e-14!15;UBERON:0000179!7.07e-14!15;UBERON:0000463!7.07e-14!15;UBERON:0000153!2.57e-10!129;UBERON:0007811!2.57e-10!129;UBERON:0000200!2.04e-09!6;UBERON:0000033!2.23e-09!123;UBERON:0004121!3.38e-09!169;UBERON:0000924!1.10e-08!173;UBERON:0006601!1.10e-08!173;UBERON:0001871!1.59e-08!7;UBERON:0002420!1.86e-07!9;UBERON:0007245!1.86e-07!9;UBERON:0010009!1.86e-07!9;UBERON:0010011!1.86e-07!9;UBERON:0000454!1.86e-07!9;UBERON:0002308!4.08e-07!9;UBERON:0000125!4.08e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.50e-22;20!UBERON:0001869;1.41e-21;32!UBERON:0001893;4.78e-20;34!UBERON:0002791;6.56e-20;32!UBERON:0002619;8.90e-20;22!UBERON:0003528;3.88e-18;34!UBERON:0002020;3.88e-18;34!UBERON:0000956;4.19e-17;25!UBERON:0000203;4.19e-17;25!UBERON:0000200;8.22e-16;6!UBERON:0000178;8.61e-16;15!UBERON:0000179;8.61e-16;15!UBERON:0000463;8.61e-16;15!UBERON:0002780;4.97e-14;41!UBERON:0001890;4.97e-14;41!UBERON:0000073;6.56e-10;53!UBERON:0002616;6.56e-10;53!UBERON:0001017;1.04e-08;75!UBERON:0001870;1.11e-08;3!UBERON:0007023;1.20e-08;114!UBERON:0000955;1.66e-08;68!UBERON:0002420;1.53e-07;9!UBERON:0007245;1.53e-07;9!UBERON:0010009;1.53e-07;9!UBERON:0010011;1.53e-07;9!UBERON:0000454;1.53e-07;9!UBERON:0002390;1.95e-07;32!UBERON:0000369;3.95e-07;4!UBERON:0002435;3.95e-07;4!UBERON:0000204;3.95e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.09e-28,114;UBERON:0001869,3.24e-25,32;UBERON:0001893,1.74e-23,34;UBERON:0002791,2.26e-22,32;UBERON:0001950,3.61e-22,20;UBERON:0002780,6.49e-21,41;UBERON:0001890,6.49e-21,41;UBERON:0003080,6.49e-21,41;UBERON:0006240,6.49e-21,41;UBERON:0003528,7.96e-21,34;UBERON:0002020,7.96e-21,34;UBERON:0002619,6.09e-20,22;UBERON:0001049,2.05e-17,56;UBERON:0005068,2.05e-17,56;UBERON:0006241,2.05e-17,56;UBERON:0007135,2.05e-17,56;UBERON:0000956,3.01e-17,25;UBERON:0000203,3.01e-17,25;UBERON:0000073,8.22e-17,53;UBERON:0002616,8.22e-17,53;UBERON:0000200,3.23e-16,6;UBERON:0000178,8.67e-16,15;UBERON:0000179,8.67e-16,15;UBERON:0000463,8.67e-16,15;UBERON:0000955,1.41e-14,68;UBERON:0006238,1.41e-14,68;UBERON:0001017,5.09e-14,81;UBERON:0003056,1.62e-12,61;UBERON:0001016,4.91e-12,89;UBERON:0003075,1.88e-11,82;UBERON:0007284,1.88e-11,82;UBERON:0002346,1.14e-10,86;UBERON:0001870,5.27e-09,3;UBERON:0010371,7.01e-09,104;UBERON:0002420,1.50e-07,9;UBERON:0007245,1.50e-07,9;UBERON:0010009,1.50e-07,9;UBERON:0010011,1.50e-07,9;UBERON:0000454,1.50e-07,9;UBERON:0000369,3.38e-07,4;UBERON:0002435,3.38e-07,4;UBERON:0000204,3.38e-07,4;UBERON:0010082,3.38e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918251677112708,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14462964217194,0,0,0.12624243342638,0,1.14596527667483,1.17217447210047,1.71072446022705,0,0,5.43070221998099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.068458076259,94.3781978199891,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,182.173691714349,185.806841335597,235.264288302929,85.763439164804,82.2724546172389,127.749242304965,160.929368296958,293.45631522888,0,0,0,0,0,0,0,0,0.5745161103971,0,0,1.40398589056729,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,2.46174797895425,11.9000498529433,0.66614393599564,2.81974010175699,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,1.40669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,167.638164642858,0,0,1.76259386507517,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,2.41192877250816,0,0.331737779793674,0,3.07139556015562,0,0,0,0,0,0,0,0,0,0,0,0,4.15529204750391,2.48155226678899,1.56850027454192,1.67821586975843,0.37950746544837,7.78789237003856,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,1.40558667435203,0,0,0,0,0,0.61214552326098,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,2.25980740780532,0,0,2.53243183823515,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0.458320848023367,2.87149209830726,0,0,0.669514372325618,2.5529719544956,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,3.34122561619136,0,0,1.62609223218494,0,0,0,0,0,0,0,0,0,0,3.3657933507229,0,0,0.293104467356165,11.9256200020999,0.646414781807753,0.39669780522807,0,0,2.0289608387862,4.08731193259131,0,0.496166021811951,0,0,0,0,0,0,0,0,1.77213635993397,1.58634144372552,1.752673029891,0,0.332787154610557,1.30402446176905,0,0,0.909894705249887,4.28198000317451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0.194860308839388,0,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,3.3399197050159,0,1.27707087245721,1.02558182120378,0.504143392443436,2.21303207885497,0.968853873791107,0,0,0,0,0,0,0,0,1.35378591028663,0,0,0,0,0,2.43135304626221,0,1.44680757550829,2.21955335678674,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0.227662191351298,2.30626162422861,0,0,0.883606528698812,3.02554758389106,0,0,0.470958557103084,2.98519620840404,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0.594092800654172,2.113278637917,0,0.751871343838829,14.631940570002,0,0,0,0,0.730336388246517,0,0.286679166302903,0,1.8357702351547,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0.829169439458779,0.827463966895162,1.49263787330687,0.23806443146374,0,0.558672428662721,0,0.318235791390825,0,0.217716747896961,0.342233301085281,0.134704106029175,0.358611026963382,1.33064142618405,0,0,0,0,2.34640942403454,0.122241444182866,0.813792356631477,3.99454064511308,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918251677112708,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14462964217194,0,0,0.12624243342638,0,1.14596527667483,1.17217447210047,1.71072446022705,0,0,5.43070221998099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.068458076259,94.3781978199891,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,182.173691714349,185.806841335597,235.264288302929,85.763439164804,82.2724546172389,127.749242304965,160.929368296958,293.45631522888,0,0,0,0,0,0,0,0,0.5745161103971,0,0,1.40398589056729,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,2.46174797895425,11.9000498529433,0.66614393599564,2.81974010175699,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,1.40669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,167.638164642858,0,0,1.76259386507517,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,2.41192877250816,0,0.331737779793674,0,3.07139556015562,0,0,0,0,0,0,0,0,0,0,0,0,4.15529204750391,2.48155226678899,1.56850027454192,1.67821586975843,0.37950746544837,7.78789237003856,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,1.40558667435203,0,0,0,0,0,0.61214552326098,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,2.25980740780532,0,0,2.53243183823515,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0.458320848023367,2.87149209830726,0,0,0.669514372325618,2.5529719544956,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,3.34122561619136,0,0,1.62609223218494,0,0,0,0,0,0,0,0,0,0,3.3657933507229,0,0,0.293104467356165,11.9256200020999,0.646414781807753,0.39669780522807,0,0,2.0289608387862,4.08731193259131,0,0.496166021811951,0,0,0,0,0,0,0,0,1.77213635993397,1.58634144372552,1.752673029891,0,0.332787154610557,1.30402446176905,0,0,0.909894705249887,4.28198000317451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0.194860308839388,0,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,3.3399197050159,0,1.27707087245721,1.02558182120378,0.504143392443436,2.21303207885497,0.968853873791107,0,0,0,0,0,0,0,0,1.35378591028663,0,0,0,0,0,2.43135304626221,0,1.44680757550829,2.21955335678674,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0.227662191351298,2.30626162422861,0,0,0.883606528698812,3.02554758389106,0,0,0.470958557103084,2.98519620840404,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0.594092800654172,2.113278637917,0,0.751871343838829,14.631940570002,0,0,0,0,0.730336388246517,0,0.286679166302903,0,1.8357702351547,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0.829169439458779,0.827463966895162,1.49263787330687,0.23806443146374,0,0.558672428662721,0,0.318235791390825,0,0.217716747896961,0.342233301085281,0.134704106029175,0.358611026963382,1.33064142618405,0,0,0,0,2.34640942403454,0.122241444182866,0.813792356631477,3.99454064511308,0.402547587182052,0 | ||
|short_description=p5@EPB49 | |||
}} | }} |
Latest revision as of 09:45, 17 September 2015
Short description: | p5@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EPB49_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -54bp_to_ENST00000520174_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | E5RFK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.70e-08 | 3 |
erythroid lineage cell | 2.18e-07 | 2 |
erythroblast | 2.18e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 2.18e-07 | 2 |
erythroid progenitor cell | 2.18e-07 | 2 |
reticulocyte | 2.18e-07 | 2 |
proerythroblast | 2.18e-07 | 2 |
basophilic erythroblast | 2.18e-07 | 2 |
polychromatophilic erythroblast | 2.18e-07 | 2 |
orthochromatic erythroblast | 2.18e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.72e-09 | 31 |
chronic leukemia | 8.42e-09 | 8 |