FFCP PHASE1:Hg19::chr17:63052607..63052621,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10672 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4381 | |||
|TSSclassifier=strong | |||
|UniProt=Q14344 | |||
|association_with_transcript=89bp_to_AB528470,AF493902,CU691408,DQ893572,DQ894448_5end | |||
|cluster_id=chr17:63052607..63052621,- | |||
|coexpression_cluster_id=C3664 | |||
|description=CAGE_peak_5_at_GNA13_5end | |||
|id=chr17:63052607..63052621,- | |||
|ontology_enrichment_celltype=CL:0000738!4.12e-44!140;CL:0000037!4.25e-36!172;CL:0000566!4.25e-36!172;CL:0000988!1.62e-35!182;CL:0002031!6.92e-34!124;CL:0002087!1.86e-32!119;CL:0002032!3.22e-32!165;CL:0000837!3.22e-32!165;CL:0000766!1.20e-28!76;CL:0002057!4.78e-27!42;CL:0000557!1.35e-26!71;CL:0000860!2.11e-24!45;CL:0002009!2.69e-24!65;CL:0000839!8.40e-24!70;CL:0002194!8.16e-23!63;CL:0000576!8.16e-23!63;CL:0000040!8.16e-23!63;CL:0000559!8.16e-23!63;CL:0000763!9.63e-23!112;CL:0000049!9.63e-23!112;CL:0000838!3.00e-09!52;CL:0000542!8.46e-09!53;CL:0000051!8.46e-09!53;CL:0000134!4.64e-07!358;CL:0000219!6.22e-07!390;CL:0000451!7.17e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.99e-51;33!CL:0002057;2.99e-51;33!CL:0000473;9.67e-40;39!CL:0000234;9.67e-40;39!CL:0000576;3.96e-34;48!CL:0000766;6.93e-31;69!CL:0000738;8.86e-18;136!CL:0002087;1.39e-16;104!CL:0000451;1.02e-14;10!CL:0000094;2.37e-13;8!CL:0000763;3.98e-13;100!CL:0000081;5.97e-12;11!CL:0002393;6.98e-12;6!CL:0002397;6.98e-12;6!CL:0000988;2.02e-11;177!CL:0000453;2.83e-11;5!CL:0000990;4.40e-11;8!CL:0000219;2.33e-09;193!CL:0000624;1.61e-08;6!CL:0000623;8.26e-08;3!CL:0000767;1.19e-07;3!CL:0000784;1.81e-07;3!CL:0000226;3.27e-07;3!CL:0000842;3.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.14e-86,136;CL:0000766,1.86e-69,72;CL:0000037,1.72e-67,168;CL:0000988,1.44e-66,177;CL:0000860,2.38e-65,42;CL:0002057,2.38e-65,42;CL:0000557,5.70e-63,67;CL:0000473,1.30e-61,48;CL:0000234,1.30e-61,48;CL:0002031,7.09e-61,120;CL:0002032,7.89e-61,161;CL:0000837,7.89e-61,161;CL:0002087,1.37e-57,115;CL:0002009,7.58e-56,61;CL:0000839,3.60e-55,66;CL:0000763,1.23e-53,108;CL:0000049,1.23e-53,108;CL:0002194,6.22e-52,59;CL:0000576,6.22e-52,59;CL:0000040,6.22e-52,59;CL:0000559,6.22e-52,59;CL:0000134,5.33e-24,354;CL:0002320,4.17e-23,361;CL:0000219,9.27e-21,386;CL:0000034,6.91e-18,441;CL:0000048,1.73e-17,427;CL:0000723,6.16e-17,433;CL:0000451,1.25e-14,10;CL:0000094,2.41e-13,8;CL:0000081,6.57e-12,11;CL:0000453,2.79e-11,5;CL:0000990,5.38e-11,8;CL:0002393,3.16e-10,9;CL:0002397,3.16e-10,9;CL:0000624,9.34e-09,6;CL:0000838,1.34e-08,52;CL:0000542,2.38e-08,53;CL:0000051,2.38e-08,53;CL:0000623,8.21e-08,3;CL:0000825,8.21e-08,3;CL:0000767,1.21e-07,3;CL:0000784,1.78e-07,3;CL:0000226,3.50e-07,3;CL:0000842,3.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-46;42!CL:0000049;3.49e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-27!102;UBERON:0003061!1.49e-27!102;UBERON:0002193!1.51e-27!112;UBERON:0002371!5.33e-22!80;UBERON:0001474!1.59e-20!86;UBERON:0002405!1.20e-17!115;UBERON:0004765!3.87e-16!101;UBERON:0001434!3.87e-16!101;UBERON:0003081!1.27e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.09e-54,98;UBERON:0003061,1.09e-54,98;UBERON:0002371,8.32e-54,76;UBERON:0002193,9.55e-52,108;UBERON:0001474,8.27e-49,82;UBERON:0002405,5.80e-47,93;UBERON:0004765,3.52e-43,90;UBERON:0001434,2.06e-37,100;UBERON:0002384,6.88e-22,371;UBERON:0003081,6.02e-19,203;UBERON:0002204,9.00e-17,167;UBERON:0000926,1.69e-07,315;UBERON:0004120,1.69e-07,315;UBERON:0006603,1.69e-07,315 | |||
|phase1_expression=0.908391896352783,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.314843125254717,6.68719270643137,14.2016877295969,9.13415127564848,0,0,0,0.46480320348181,0.710846162437108,0.293600439334847,4.9859586767869,8.02177789880567,6.94434786290726,0.671746422719773,0.32389366601898,0.77272670290256,1.30858414901608,2.64513160582167,1.94067248950253,1.62700325833979,5.75635043230556,4.02618282163635,4.89077066947656,3.84241059793651,2.36482229888585,3.44745680736619,4.51839278508678,4.06279459783025,2.44715041405386,2.45615535052061,4.49446968890169,3.36692281607993,5.77672248736969,4.47535988059329,1.64925650093358,3.59034583718937,1.70489900213078,1.7412554317715,2.26954089876456,1.86846674698672,6.53246529667532,2.08593167368081,4.56096573880745,1.21079900526674,1.10483290796269,1.58231193720442,2.32380814943136,1.70083439972035,1.67726916406701,1.12328631146495,1.50176892841506,1.44653028027372,1.14005097496499,0.19891667719909,0.730656615058536,0,0.546138611262131,0,0.853460445133014,0,0,1.32208974556972,0,16.507176104174,44.0427892028204,34.0223173031454,9.25199300053181,17.3757654524276,0,8.65522988500866,10.6112905942274,4.11202997999018,0,0.651844533267181,0.946895611469467,0,0.668462741311041,1.76763544484902,1.10766947291811,0.270803863765016,0.25618263945135,0.260118695119756,0.822189523018381,0.552700035571697,0.289803085735052,0,0,0,0.226618685395132,1.91610246800961,1.37450978193052,1.01207876807801,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,0,0.236777252044017,0,18.3462136334507,17.6510529217115,7.82051780967114,0,0,0.511450247374121,0,1.00267582127178,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,1.0447784237956,0.398873881556595,7.63169997777094,7.43593384014166,5.94332002127304,0.39752481473341,0,0,0,0,0,0.417989933073621,1.03366703667732,0.71153252537342,1.00416183829401,0.805658634218294,0.760272105718513,0.732186172644509,0,0,0.17859945656816,0,0.225222960966644,0,0.949265659568129,0.183201743930407,56.6655794975072,38.7780264148325,0,0,0,0,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0,0.57978255948989,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0,1.56449532329816,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.738651018262192,0,0.445893486866185,0,0.335964256397719,0,0,0,0,2.95597942737566,0,3.52457796419313,5.6206781832615,1.00993946741104,0.190493682876507,1.52795370223311,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0,1.2162378064119,1.50677127429638,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0,0.336255431980582,15.3683992957503,14.4470475155877,12.8343036279748,0.76228387266739,0,0,0,0,3.74503511973591,0,4.14415513436035,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,3.72182447021197,5.60856922128404,6.08347079479633,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0.40101294060657,0,0,0,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0.576570202095319,0,0,0.464845549297286,0,0,0.616067160352178,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.229723400206959,0.507447609232169,2.29391162142713,0,0.238231775457789,0.411362273086194,0.648473311192717,0,1.58625035258854,0.320472213382419,0,0.735120647943095,0,0,0.0711418433484141,0,0.399158742865633,0.383010740264733,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0.614321404198464,0,0,0.333926115068718,0,0.211125408127993,0,1.38141957765574,0,0.306806047506464,0.369254416383208,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0.41827123283581,0,0.227884111694002,0.46112780877612,0,0.217294743844016,0.957003479195758,0,1.06606955203727,1.0219329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| |||
|short_description=p5@GNA13 | |||
}} |
Latest revision as of 20:20, 16 September 2015
Short description: | p5@GNA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GNA13_5end |
Coexpression cluster: | C3664_immature_Eosinophils_CD19_CD34_CD8_Basophils_Natural |
Association with transcript: | 89bp_to_AB528470, AF493902, CU691408, DQ893572, DQ894448_5end |
EntrezGene: | GNA13 |
HGNC: | 4381 |
UniProt: | Q14344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.09e-54 | 98 |
blood island | 1.09e-54 | 98 |
bone marrow | 8.32e-54 | 76 |
hemolymphoid system | 9.55e-52 | 108 |
bone element | 8.27e-49 | 82 |
immune system | 5.80e-47 | 93 |
skeletal element | 3.52e-43 | 90 |
skeletal system | 2.06e-37 | 100 |
connective tissue | 6.88e-22 | 371 |
lateral plate mesoderm | 6.02e-19 | 203 |
musculoskeletal system | 9.00e-17 | 167 |
mesoderm | 1.69e-07 | 315 |
mesoderm-derived structure | 1.69e-07 | 315 |
presumptive mesoderm | 1.69e-07 | 315 |