FFCP PHASE1:Hg19::chr17:7018100..7018111,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=433 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=743 | |||
|TSSclassifier=strong | |||
|UniProt=P07307 | |||
|association_with_transcript=16bp_to_ENST00000380952_5end | |||
|cluster_id=chr17:7018100..7018111,- | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_4_at_ASGR2_5end | |||
|id=chr17:7018100..7018111,- | |||
|ontology_enrichment_celltype=CL:0002057!8.68e-67!42;CL:0000860!1.68e-61!45;CL:0002009!3.46e-54!65;CL:0002194!1.11e-53!63;CL:0000576!1.11e-53!63;CL:0000040!1.11e-53!63;CL:0000559!1.11e-53!63;CL:0000766!1.93e-49!76;CL:0000557!1.70e-48!71;CL:0000839!5.03e-47!70;CL:0000763!8.72e-34!112;CL:0000049!8.72e-34!112;CL:0002087!1.69e-30!119;CL:0000738!3.39e-29!140;CL:0002031!7.10e-26!124;CL:0000037!3.85e-23!172;CL:0000566!3.85e-23!172;CL:0002032!2.27e-21!165;CL:0000837!2.27e-21!165;CL:0000988!5.03e-21!182;CL:0000181!4.03e-09!12;CL:0000417!4.03e-09!12;CL:0000668!4.03e-09!12;CL:0000414!4.03e-09!12;CL:0000412!4.03e-09!12;CL:0000182!4.03e-09!12;CL:0000134!2.51e-07!358;CL:0000767!3.05e-07!3;CL:0002320!6.51e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.39e-97;33!CL:0002057;4.39e-97;33!CL:0000473;2.15e-67;39!CL:0000234;2.15e-67;39!CL:0000576;3.26e-56;48!CL:0000766;8.45e-33;69!CL:0000763;1.02e-15;100!CL:0000182;8.13e-15;12!CL:0002087;5.01e-13;104!CL:0000738;4.54e-09;136!CL:0002393;7.96e-09;6!CL:0002397;7.96e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.51e-104,42;CL:0002057,4.51e-104,42;CL:0000473,6.80e-90,48;CL:0000234,6.80e-90,48;CL:0002194,4.81e-70,59;CL:0000576,4.81e-70,59;CL:0000040,4.81e-70,59;CL:0000559,4.81e-70,59;CL:0002009,1.75e-67,61;CL:0000766,6.24e-63,72;CL:0000839,9.50e-62,66;CL:0000557,1.05e-60,67;CL:0000763,3.55e-41,108;CL:0000049,3.55e-41,108;CL:0002087,1.14e-35,115;CL:0000738,1.62e-32,136;CL:0002031,4.84e-30,120;CL:0000037,6.10e-26,168;CL:0002032,1.67e-24,161;CL:0000837,1.67e-24,161;CL:0000988,4.03e-24,177;CL:0000182,8.06e-15,12;CL:0000134,1.09e-12,354;CL:0002320,3.13e-12,361;CL:0000219,1.30e-10,386;CL:0000048,1.21e-08,427;CL:0000723,2.25e-08,433;CL:0000034,5.04e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-75;42!UBERON:0004161;7.92e-16;11!UBERON:0009497;3.21e-13;13!CL:0000049;6.56e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.00e-51!102;UBERON:0003061!2.00e-51!102;UBERON:0002405!6.53e-50!115;UBERON:0002193!2.17e-47!112;UBERON:0002371!1.48e-41!80;UBERON:0001474!9.82e-38!86;UBERON:0004765!3.55e-30!101;UBERON:0001434!3.55e-30!101;UBERON:0003081!8.82e-17!216;UBERON:0002204!2.73e-13!167;UBERON:0005057!1.65e-11!26;UBERON:0000926!1.18e-10!448;UBERON:0004120!1.18e-10!448;UBERON:0006603!1.18e-10!448;UBERON:0002107!9.02e-09!19;UBERON:0006925!9.02e-09!19;UBERON:0008836!9.02e-09!19;UBERON:0009497!1.53e-07!25;UBERON:0000015!1.53e-07!25;UBERON:0002423!1.53e-07!25;UBERON:0006235!1.53e-07!25;UBERON:0004161!1.53e-07!25;UBERON:0008835!2.74e-07!22;UBERON:0003894!2.74e-07!22;UBERON:0000178!3.49e-07!15;UBERON:0000179!3.49e-07!15;UBERON:0000463!3.49e-07!15;UBERON:0009854!6.99e-07!23;UBERON:0002384!9.20e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.57e-15;19!UBERON:0006925;8.57e-15;19!UBERON:0002423;4.13e-13;25!UBERON:0002365;3.84e-08;31!UBERON:0002330;3.84e-08;31!UBERON:0002368;3.86e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.62e-52,76;UBERON:0002390,1.89e-48,98;UBERON:0003061,1.89e-48,98;UBERON:0001474,4.80e-48,82;UBERON:0002193,1.63e-45,108;UBERON:0002405,7.26e-44,93;UBERON:0004765,5.30e-43,90;UBERON:0001434,8.00e-38,100;UBERON:0002204,4.42e-19,167;UBERON:0003081,2.02e-18,203;UBERON:0002107,8.58e-15,19;UBERON:0006925,8.58e-15,19;UBERON:0008836,8.58e-15,19;UBERON:0009497,4.16e-13,25;UBERON:0000015,4.16e-13,25;UBERON:0002423,4.16e-13,25;UBERON:0006235,4.16e-13,25;UBERON:0004161,4.16e-13,25;UBERON:0008835,1.61e-12,22;UBERON:0003894,1.61e-12,22;UBERON:0009854,6.78e-12,23;UBERON:0002384,1.33e-11,371;UBERON:0007499,8.52e-11,25;UBERON:0009856,2.61e-10,26;UBERON:0000926,1.57e-08,315;UBERON:0004120,1.57e-08,315;UBERON:0006603,1.57e-08,315;UBERON:0002365,2.35e-08,31;UBERON:0002330,2.35e-08,31;UBERON:0002368,3.36e-07,35;UBERON:0003929,3.82e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11373559903575,0.767658796194425,3.2511385896376,0,0,0,0,0,0,1.66198622559563,2.20598892217156,2.38711957787437,0.447830948479849,0.32389366601898,0.257575567634187,4.65274364094607,3.77875943688809,3.88134497900506,3.48643555358527,2.87817521615278,1.54853185447552,4.89077066947656,3.84241059793651,2.60130452877444,3.7922024881028,3.22742341791913,1.35426486594342,3.38836211176688,2.18324920046277,1.79778787556068,5.81559395504715,3.20929027076094,3.19668562899521,2.96866170168044,3.59034583718937,3.40979800426155,6.38460324982885,2.26954089876456,3.11411124497787,4.77372463987812,4.69334626578181,2.82345498116652,5.44859552370032,3.31449872388808,3.79754864929061,0,0.637812899895131,1.67726916406701,4.4931452458598,4.8056605709282,5.30394436100364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,15.725235466842,25.4039659873004,0,2.33678033231916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.07857100409308,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0,0,1.52234282769651,0,0,0.714695326373367,0.411362273086194,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27217764290547,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,11.6495949527454,12.4477428045413,11.2909725982198,10.7171634728154,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.157611414598396,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5345367698767,33.1267222280553,0,0,0.171086837884329,0,0.106787412567695,0.471612915298998,0,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0.217716747896961,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p4@ASGR2 | |||
}} |
Latest revision as of 03:44, 17 September 2015
Short description: | p4@ASGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ASGR2_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 16bp_to_ENST00000380952_5end |
EntrezGene: | ASGR2 |
HGNC: | 743 |
UniProt: | P07307 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.51e-104 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.51e-104 | 42 |
defensive cell | 6.80e-90 | 48 |
phagocyte | 6.80e-90 | 48 |
monopoietic cell | 4.81e-70 | 59 |
monocyte | 4.81e-70 | 59 |
monoblast | 4.81e-70 | 59 |
promonocyte | 4.81e-70 | 59 |
macrophage dendritic cell progenitor | 1.75e-67 | 61 |
myeloid leukocyte | 6.24e-63 | 72 |
myeloid lineage restricted progenitor cell | 9.50e-62 | 66 |
granulocyte monocyte progenitor cell | 1.05e-60 | 67 |
myeloid cell | 3.55e-41 | 108 |
common myeloid progenitor | 3.55e-41 | 108 |
nongranular leukocyte | 1.14e-35 | 115 |
leukocyte | 1.62e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 4.84e-30 | 120 |
hematopoietic stem cell | 6.10e-26 | 168 |
hematopoietic oligopotent progenitor cell | 1.67e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-24 | 161 |
hematopoietic cell | 4.03e-24 | 177 |
hepatocyte | 8.06e-15 | 12 |
mesenchymal cell | 1.09e-12 | 354 |
connective tissue cell | 3.13e-12 | 361 |
motile cell | 1.30e-10 | 386 |
multi fate stem cell | 1.21e-08 | 427 |
somatic stem cell | 2.25e-08 | 433 |
stem cell | 5.04e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.62e-52 | 76 |
hematopoietic system | 1.89e-48 | 98 |
blood island | 1.89e-48 | 98 |
bone element | 4.80e-48 | 82 |
hemolymphoid system | 1.63e-45 | 108 |
immune system | 7.26e-44 | 93 |
skeletal element | 5.30e-43 | 90 |
skeletal system | 8.00e-38 | 100 |
musculoskeletal system | 4.42e-19 | 167 |
lateral plate mesoderm | 2.02e-18 | 203 |
liver | 8.58e-15 | 19 |
digestive gland | 8.58e-15 | 19 |
liver bud | 8.58e-15 | 19 |
epithelium of foregut-midgut junction | 4.16e-13 | 25 |
anatomical boundary | 4.16e-13 | 25 |
hepatobiliary system | 4.16e-13 | 25 |
foregut-midgut junction | 4.16e-13 | 25 |
septum transversum | 4.16e-13 | 25 |
hepatic diverticulum | 1.61e-12 | 22 |
liver primordium | 1.61e-12 | 22 |
digestive tract diverticulum | 6.78e-12 | 23 |
connective tissue | 1.33e-11 | 371 |
epithelial sac | 8.52e-11 | 25 |
sac | 2.61e-10 | 26 |
mesoderm | 1.57e-08 | 315 |
mesoderm-derived structure | 1.57e-08 | 315 |
presumptive mesoderm | 1.57e-08 | 315 |
exocrine gland | 2.35e-08 | 31 |
exocrine system | 2.35e-08 | 31 |
endocrine gland | 3.36e-07 | 35 |
gut epithelium | 3.82e-07 | 54 |