FFCP PHASE1:Hg19::chr18:44181418..44181441,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26521 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVV2 | |||
|association_with_transcript=184bp_to_AK127869_5end | |||
|cluster_id=chr18:44181418..44181441,- | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_3_at_LOXHD1_5end | |||
|id=chr18:44181418..44181441,- | |||
|ontology_enrichment_celltype=CL:0002057!2.44e-48!42;CL:0000860!2.07e-44!45;CL:0000766!4.24e-41!76;CL:0002194!3.39e-34!63;CL:0000576!3.39e-34!63;CL:0000040!3.39e-34!63;CL:0000559!3.39e-34!63;CL:0000763!5.03e-33!112;CL:0000049!5.03e-33!112;CL:0002009!8.01e-33!65;CL:0000839!9.85e-30!70;CL:0000557!3.62e-29!71;CL:0000738!8.26e-20!140;CL:0000037!1.38e-19!172;CL:0000566!1.38e-19!172;CL:0002032!5.44e-18!165;CL:0000837!5.44e-18!165;CL:0000988!9.78e-18!182;CL:0002087!2.58e-16!119;CL:0000094!2.12e-13!8;CL:0002031!2.03e-12!124;CL:0000081!2.20e-09!11;CL:0000775!4.56e-08!3;CL:0000767!5.42e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.11e-41;33!CL:0002057;2.11e-41;33!CL:0000473;1.55e-27;39!CL:0000234;1.55e-27;39!CL:0000775;5.26e-20;3!CL:0000576;8.00e-20;48!CL:0000766;6.25e-16;69!CL:0000094;3.80e-13;8!CL:0000763;7.47e-10;100!CL:0000081;1.36e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.33e-34,42;CL:0002057,3.33e-34,42;CL:0000766,6.29e-30,72;CL:0000473,1.59e-29,48;CL:0000234,1.59e-29,48;CL:0000763,1.61e-25,108;CL:0000049,1.61e-25,108;CL:0002194,5.62e-23,59;CL:0000576,5.62e-23,59;CL:0000040,5.62e-23,59;CL:0000559,5.62e-23,59;CL:0002009,3.94e-22,61;CL:0000839,3.07e-20,66;CL:0000775,5.27e-20,3;CL:0000557,6.80e-20,67;CL:0002032,1.13e-15,161;CL:0000837,1.13e-15,161;CL:0000037,7.83e-15,168;CL:0000738,4.76e-14,136;CL:0000988,7.52e-14,177;CL:0000094,3.80e-13,8;CL:0002087,2.45e-10,115;CL:0002031,8.84e-10,120;CL:0000081,1.36e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-28;42!CL:0000049;8.49e-13;108 | |||
|ontology_enrichment_disease=DOID:171!1.66e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.86e-23;10!DOID:3095;2.36e-10;22!DOID:2994;2.36e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.86e-23,10;DOID:3095,2.36e-10,22;DOID:2994,2.36e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.65e-31!102;UBERON:0003061!1.65e-31!102;UBERON:0002193!1.57e-30!112;UBERON:0002371!1.02e-24!80;UBERON:0001474!2.82e-22!86;UBERON:0002405!1.12e-19!115;UBERON:0004765!1.30e-18!101;UBERON:0001434!1.30e-18!101;UBERON:0003081!7.73e-14!216;UBERON:0002204!3.82e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.42e-27;4!UBERON:0000923;7.42e-27;4!UBERON:0010316;7.42e-27;4!UBERON:0005291;7.42e-27;4!UBERON:0002050;1.57e-21;5!UBERON:0005423;1.57e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.42e-17,76;UBERON:0002390,1.96e-16,98;UBERON:0003061,1.96e-16,98;UBERON:0001474,1.02e-15,82;UBERON:0002193,1.36e-14,108;UBERON:0004765,4.72e-14,90;UBERON:0002405,1.68e-13,93;UBERON:0001434,2.41e-12,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.77408061658038,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,2.18097358169347,1.51150377475524,0.485168122375632,2.55671940596253,1.23350366406548,0.619412741790207,1.7261543539329,0.512321413058201,0.47296445977717,2.06847408441971,1.93645405075148,1.35426486594342,2.07066573496865,1.09162460023138,0.224723484445085,1.22433556948361,1.92557416245656,0.639337125799041,0.989553900560148,1.39624560335142,0.426224750532694,0,0.56738522469114,0,0.75374599577023,1.5644487552606,0.868755378820466,0.605399502633369,2.94622108790052,0,0.422510572623884,0.212604299965044,0,1.79725809834392,0,0,0.855038231223746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,8.97484377612075,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,1.70894156152249,0,0,0.648473311192717,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,1.29848776109822,0,0,1.09675927041116,0,0,0,0,0.425846237690326,5.49608551609224,0.307240764308458,0.447352215784832,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95727842751532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.670189836725,0,7.12876625806906,6.37724760305049,29.6206476579015,13.4074780313579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,36.5812188268011,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0.773494655682926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p3@LOXHD1 | |||
}} |
Latest revision as of 15:26, 19 September 2015
Short description: | p3@LOXHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOXHD1_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | 184bp_to_AK127869_5end |
EntrezGene: | LOXHD1 |
HGNC: | 26521 |
UniProt: | Q8IVV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.33e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-34 | 42 |
myeloid leukocyte | 6.29e-30 | 72 |
defensive cell | 1.59e-29 | 48 |
phagocyte | 1.59e-29 | 48 |
myeloid cell | 1.61e-25 | 108 |
common myeloid progenitor | 1.61e-25 | 108 |
monopoietic cell | 5.62e-23 | 59 |
monocyte | 5.62e-23 | 59 |
monoblast | 5.62e-23 | 59 |
promonocyte | 5.62e-23 | 59 |
macrophage dendritic cell progenitor | 3.94e-22 | 61 |
myeloid lineage restricted progenitor cell | 3.07e-20 | 66 |
neutrophil | 5.27e-20 | 3 |
granulocyte monocyte progenitor cell | 6.80e-20 | 67 |
hematopoietic oligopotent progenitor cell | 1.13e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-15 | 161 |
hematopoietic stem cell | 7.83e-15 | 168 |
leukocyte | 4.76e-14 | 136 |
hematopoietic cell | 7.52e-14 | 177 |
granulocyte | 3.80e-13 | 8 |
nongranular leukocyte | 2.45e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 8.84e-10 | 120 |
blood cell | 1.36e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.42e-17 | 76 |
hematopoietic system | 1.96e-16 | 98 |
blood island | 1.96e-16 | 98 |
bone element | 1.02e-15 | 82 |
hemolymphoid system | 1.36e-14 | 108 |
skeletal element | 4.72e-14 | 90 |
immune system | 1.68e-13 | 93 |
skeletal system | 2.41e-12 | 100 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.86e-23 | 10 |
germ cell and embryonal cancer | 2.36e-10 | 22 |
germ cell cancer | 2.36e-10 | 22 |