FFCP PHASE1:Hg19::chr9:113800341..113800373,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:113800341..113800373,-
|short_description=p4@LPAR1
|description=CAGE_peak_4_at_LPAR1_5end
|association_with_transcript=0bp_to_ENST00000358883,NM_001401,NM_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1902 | |EntrezGene=1902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |HGNC=3166 | ||
|TSSclassifier=strong | |||
|UniProt=Q92633,Q5VZX0 | |UniProt=Q92633,Q5VZX0 | ||
|association_with_transcript=0bp_to_ENST00000358883,NM_001401,NM_057159,uc004bfb.2,uc004bfc.2,uc011lwn.1_5end | |||
|cluster_id=chr9:113800341..113800373,- | |||
|coexpression_cluster_id=C2016 | |||
|description=CAGE_peak_4_at_LPAR1_5end | |||
|id=chr9:113800341..113800373,- | |||
|ontology_enrichment_celltype=CL:0000055!4.41e-20!180;CL:0000057!3.37e-15!75;CL:0000680!7.09e-11!57;CL:0000056!7.09e-11!57;CL:0000355!7.09e-11!57;CL:0000187!5.71e-10!54;CL:0000183!1.13e-09!59;CL:0000393!4.09e-08!60;CL:0000211!4.09e-08!60;CL:0000192!1.07e-07!42;CL:0000514!1.07e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.08e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.08e-16,76;CL:0000680,9.87e-12,58;CL:0000056,9.87e-12,58;CL:0000355,9.87e-12,58;CL:0000187,1.05e-10,55;CL:0000192,2.14e-08,43;CL:0000514,2.14e-08,43;CL:0000393,4.08e-08,61;CL:0000211,4.08e-08,61;CL:0002620,6.39e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.08e-25!365;UBERON:0000914!6.33e-18!83;UBERON:0002329!6.33e-18!83;UBERON:0003077!6.33e-18!83;UBERON:0003059!6.33e-18!83;UBERON:0007282!6.33e-18!83;UBERON:0009618!6.33e-18!83;UBERON:0007285!6.33e-18!83;UBERON:0000468!4.01e-16!659;UBERON:0000481!2.59e-14!347;UBERON:0001049!4.15e-14!57;UBERON:0005068!4.15e-14!57;UBERON:0006241!4.15e-14!57;UBERON:0007135!4.15e-14!57;UBERON:0000955!6.07e-14!69;UBERON:0006238!6.07e-14!69;UBERON:0000033!1.05e-13!123;UBERON:0002616!1.18e-13!59;UBERON:0000073!4.07e-13!94;UBERON:0001016!4.07e-13!94;UBERON:0004290!4.13e-13!70;UBERON:0001017!7.50e-13!82;UBERON:0000467!1.13e-12!625;UBERON:0000922!1.53e-12!612;UBERON:0000153!1.55e-12!129;UBERON:0007811!1.55e-12!129;UBERON:0000923!1.59e-12!604;UBERON:0005291!1.59e-12!604;UBERON:0006598!1.59e-12!604;UBERON:0002532!1.59e-12!604;UBERON:0002050!1.86e-12!605;UBERON:0005423!1.86e-12!605;UBERON:0000480!2.05e-12!626;UBERON:0000486!7.43e-12!82;UBERON:0005743!1.53e-11!86;UBERON:0005256!4.11e-11!143;UBERON:0001893!7.31e-11!34;UBERON:0002020!9.13e-11!34;UBERON:0003528!9.13e-11!34;UBERON:0004121!1.18e-10!169;UBERON:0000119!1.32e-10!312;UBERON:0000924!1.82e-10!173;UBERON:0006601!1.82e-10!173;UBERON:0002780!1.83e-10!41;UBERON:0001890!1.83e-10!41;UBERON:0006240!1.83e-10!41;UBERON:0003080!1.92e-10!42;UBERON:0001134!2.05e-10!61;UBERON:0002036!2.05e-10!61;UBERON:0003082!2.05e-10!61;UBERON:0002385!2.35e-10!63;UBERON:0001015!2.35e-10!63;UBERON:0000383!2.35e-10!63;UBERON:0002791!2.36e-10!33;UBERON:0002100!3.87e-10!216;UBERON:0000483!4.23e-10!309;UBERON:0003102!5.80e-10!95;UBERON:0000062!1.12e-09!511;UBERON:0001869!1.14e-09!32;UBERON:0003075!3.51e-09!86;UBERON:0007284!3.51e-09!86;UBERON:0002346!7.54e-09!90;UBERON:0000479!9.07e-09!787;UBERON:0000477!2.06e-08!286;UBERON:0007023!2.67e-08!115;UBERON:0002619!3.37e-08!22;UBERON:0001950!1.94e-07!20;UBERON:0000956!8.16e-07!25;UBERON:0000203!8.16e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.91e-10;34!UBERON:0003528;1.67e-09;34!UBERON:0002020;1.67e-09;34!UBERON:0002791;2.42e-09;32!UBERON:0001869;2.52e-09;32!UBERON:0002619;5.83e-09;22!UBERON:0000075;1.93e-08;16!UBERON:0002780;2.25e-08;41!UBERON:0001890;2.25e-08;41!UBERON:0001950;4.47e-08;20!UBERON:0000073;1.95e-07;53!UBERON:0002616;1.95e-07;53!UBERON:0001017;3.18e-07;75!UBERON:0000956;6.04e-07;25!UBERON:0000203;6.04e-07;25 | |||
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|phase1_expression=7.08545679155171,4.92431204949261,9.02108186214215,8.00586386825043,10.7270662662549,5.23403114460221,2.53299878168311,3.15859936713415,2.08948502559871,1.72013755551056,0.697801167972428,0.218441372130172,0.527533956456907,12.3766352960047,11.5989081504771,2.01697543935533,4.21886169616784,7.30310090387373,4.87932798790507,0.492484232307152,3.26401105990805,0,0.286235987131057,0.136874425072884,0.502170558379211,0.534893840235659,1.39571002064908,1.18066171970519,0.393364276848904,0,0.77408061658038,0,0.90361775633475,0,0,0,0,0,1.80490002723128,0.868043482863407,3.13481663935894,1.6194683300949,2.06060454107349,0.145398238779565,0.377875943688809,0.242584061187816,0.929716147622738,2.05583944010913,1.54853185447552,0.575384784644301,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0.449446968890169,1.53041946185451,0.641858054152187,0,0.329851300186716,0.199463657621632,0.852449501065388,1.16083695451434,1.13477044938228,1.24564449799115,0.75374599577023,1.5644487552606,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0,1.04829322754188,2.13424399178341,2.10247649978109,3.2145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.40648818027883,2.89151321907653,2.00535164254356,4.77993512570718,1.5905718941022,5.35298357332899,0.283604451492204,0,0.43917392846563,1.57174890597255,0,0,1.62273696827342,1.39303789839414,0.531831842075461,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.872188104285069,2.98183171017191,2.91250176828533,1.72131935057184,3.72887606973458,3.90135220418193,0.560677600142307,0,0,2.17847724779836,1.34710672069688,0.980771418680752,3.78393569112329,5.18558332031999,9.60717870518566,3.74592092196385,2.2818872861778,6.42629326372745,6.22402842811954,7.44615544093405,4.07307339436521,7.75785850768594,8.47556789451199,12.1924421787403,22.572054288359,12.1160795346493,10.9219363432563,4.31170885089743,8.08013346979518,10.7601927089889,8.03485934904131,6.58466431321257,6.43624371177941,14.5730917139399,0.567160915800105,2.51145489964407,0.85422955527427,1.48352330811693,3.00091096084402,2.57631323096097,3.09168648054755,2.79175284497385,3.88185564154912,1.36411807225678,3.28163906517349,2.02509777013059,3.39456719319505,2.13005755509969,1.20902517873168,3.89989362314122,0.57978255948989,1.36373060295417,0.860413786167011,0.487894824518382,0.662648841607426,0.69716365721711,0.414644220061482,0.504641701751257,1.09493207722749,3.12899064659632,2.57296375277154,2.76269842704961,6.50115099244771,3.60939740834793,0,0.168584690078102,0,0.330881918197182,0,0,0.134831308160164,0,0,0,2.80483547606892,0.8231480226628,0,0,0,0,0,1.35287282397425,0.171567810298526,0.548751427043128,1.1240175325762,0.301586917234893,0.555530670951178,11.077482380551,6.23960871167747,1.44331342025273,0.115930404975077,0.469634776943287,0,0,0,0,0,0.984868024349589,1.40402559083543,0.891786973732369,3.74935335947108,0.503946384596579,0.850650583454319,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0.190493682876507,0,0,0,0.205654985406647,0,0,4.26098120512371,1.74384027533312,3.0802080044799,1.29271715757778,0,1.690605505112,0.26593811658487,3.12022310734098,3.60090323966999,8.5109479213967,4.52917704327369,5.14720777169331,10.3098105024374,3.29296134712308,0.977208552881205,3.19852753868291,3.16780749173372,0.301439377059586,0,0.299918973546171,0,1.00451418286425,0,0.479249710983165,1.14861935834114,4.27910715122155,6.51515880004106,4.52047909610843,2.14873155887875,0,0.197030760201927,0,0,0.76228387266739,0,0.773288812777695,0,0,0,0,1.24324654030811,12.1464576801948,9.50323990013386,9.76554085319048,1.87173775377726,4.63915370872621,3.15404830067869,1.99140405487612,3.00946099727719,0,3.10419213877515,1.99267679560631,2.76553752812555,6.34250385617005,5.09083009403126,3.0882908142977,0.413536052245775,0.647142602455851,0.213455115606889,0,1.66435439510497,0.907170879989041,2.97729369382532,1.68808170616869,2.24528075546459,5.50998341799514,5.62877973973374,2.2519548960105,7.42090332224955,2.62156479464514,1.42049380250502,3.28508624055237,6.23105315020345,2.90525946149898,2.90062679019893,1.00253235151642,0.0920809889358963,3.09999010044438,7.82992022428883,8.26083814244372,0.902399225814824,0.308061348417659,1.56869953835371,0,0.949964660035881,0,0,0.215915916102139,0,1.08378575017541,0.501689773854853,1.27438136522519,0,0.447749509444357,0,0,0.512900250232778,0,0,0.515205058238611,0.915694648183434,0.82509499920588,0,1.30012049207304,1.6068392984416,5.02687735119034,3.23502095940753,2.30255512089194,3.85942402956686,5.80069322288678,3.91545073568417,2.21589231281862,1.78064071293475,1.32227932288782,2.69066094311149,1.65896526242959,0.50578890427775,0,2.83331112147576,4.8792608911242,1.23213432070436,1.59691809095107,4.34966496037536,2.03856641014312,0.572499546967965,2.60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| ||
|short_description=p4@LPAR1 | |||
}} | }} |
Latest revision as of 03:59, 20 September 2015
Short description: | p4@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LPAR1_5end |
Coexpression cluster: | C2016_Fibroblast_corpus_Nucleus_Anulus_globus_tridermal_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000358883, NM_001401, NM_057159, uc004bfb.2, uc004bfc.2, uc011lwn.1_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | Q92633Q5VZX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.08e-16 | 76 |
muscle precursor cell | 9.87e-12 | 58 |
myoblast | 9.87e-12 | 58 |
multi-potent skeletal muscle stem cell | 9.87e-12 | 58 |
muscle cell | 1.05e-10 | 55 |
smooth muscle cell | 2.14e-08 | 43 |
smooth muscle myoblast | 2.14e-08 | 43 |
electrically responsive cell | 4.08e-08 | 61 |
electrically active cell | 4.08e-08 | 61 |
skin fibroblast | 6.39e-07 | 23 |