FFCP PHASE1:Hg19::chr21:36259445..36259519,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10471 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000399240_5end | |||
|cluster_id=chr21:36259445..36259519,- | |||
|description=CAGE_peak_4_at_RUNX1_5end | |||
|id=chr21:36259445..36259519,- | |||
|ontology_enrichment_celltype=CL:0002371!5.93e-22!591;CL:0000144!1.41e-20!625;CL:0000548!6.33e-17!679;CL:0000004!6.33e-17!679;CL:0000255!6.33e-17!679;CL:0000012!7.34e-17!682;CL:0000048!1.06e-14!430;CL:0000055!6.32e-14!180;CL:0000723!1.50e-13!436;CL:0000034!6.96e-12!444;CL:0002057!1.24e-11!42;CL:0002194!1.85e-10!63;CL:0000576!1.85e-10!63;CL:0000040!1.85e-10!63;CL:0000559!1.85e-10!63;CL:0002320!2.60e-10!365;CL:0000860!3.91e-10!45;CL:0002009!8.44e-10!65;CL:0000134!1.47e-09!358;CL:0000057!1.87e-09!75;CL:0000557!2.92e-09!71;CL:0000839!1.28e-08!70;CL:0000003!1.60e-08!722;CL:0000219!1.68e-08!390;CL:0000680!1.68e-07!57;CL:0000056!1.68e-07!57;CL:0000355!1.68e-07!57;CL:0000183!1.76e-07!59;CL:0000766!2.35e-07!76;CL:0000187!8.51e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.16e-15;33!CL:0002057;9.16e-15;33!CL:0000473;2.75e-11;39!CL:0000234;2.75e-11;39!CL:0000576;3.96e-08;48!CL:0002620;7.82e-07;23!CL:0000134;8.44e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.34e-16,427;CL:0000723,3.50e-15,433;CL:0000034,1.11e-13,441;CL:0000860,5.78e-12,42;CL:0002057,5.78e-12,42;CL:0000473,2.36e-11,48;CL:0000234,2.36e-11,48;CL:0002320,3.07e-11,361;CL:0002194,4.18e-11,59;CL:0000576,4.18e-11,59;CL:0000040,4.18e-11,59;CL:0000559,4.18e-11,59;CL:0000134,1.97e-10,354;CL:0002009,5.32e-10,61;CL:0000219,8.67e-10,386;CL:0000057,1.27e-09,76;CL:0000557,2.24e-09,67;CL:0000839,3.63e-09,66;CL:0000766,5.09e-08,72;CL:0000680,6.84e-08,58;CL:0000056,6.84e-08,58;CL:0000355,6.84e-08,58;CL:0000187,3.75e-07,55;CL:0000192,7.47e-07,43;CL:0000514,7.47e-07,43;CL:0002620,8.89e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.30e-15!167;UBERON:0002371!2.37e-10!80;UBERON:0002384!3.79e-10!375;UBERON:0001474!2.08e-09!86;UBERON:0004765!2.59e-09!101;UBERON:0001434!2.59e-09!101;UBERON:0003081!1.54e-08!216;UBERON:0000926!1.88e-08!448;UBERON:0004120!1.88e-08!448;UBERON:0006603!1.88e-08!448;UBERON:0000486!1.15e-07!82;UBERON:0000914!1.18e-07!83;UBERON:0002329!1.18e-07!83;UBERON:0003077!1.18e-07!83;UBERON:0003059!1.18e-07!83;UBERON:0007282!1.18e-07!83;UBERON:0009618!1.18e-07!83;UBERON:0007285!1.18e-07!83;UBERON:0004290!2.40e-07!70;UBERON:0002390!2.67e-07!102;UBERON:0003061!2.67e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.22e-15,167;UBERON:0002384,2.85e-11,371;UBERON:0000926,4.95e-11,315;UBERON:0004120,4.95e-11,315;UBERON:0006603,4.95e-11,315;UBERON:0002371,2.34e-10,76;UBERON:0001434,2.79e-09,100;UBERON:0001474,3.22e-09,82;UBERON:0004765,1.02e-08,90;UBERON:0000486,2.74e-08,83;UBERON:0007503,5.25e-08,78;UBERON:0002405,5.49e-08,93;UBERON:0002329,5.76e-08,71;UBERON:0003059,5.76e-08,71;UBERON:0007282,5.76e-08,71;UBERON:0004290,5.76e-08,71;UBERON:0009618,5.76e-08,71;UBERON:0007524,7.49e-08,73;UBERON:0003077,1.46e-07,72;UBERON:0007285,1.46e-07,72;UBERON:0003081,3.76e-07,203;UBERON:0001134,4.59e-07,62;UBERON:0002036,4.59e-07,62;UBERON:0003082,4.59e-07,62;UBERON:0002390,6.31e-07,98;UBERON:0003061,6.31e-07,98 | |||
|phase1_expression=1.63510541343501,2.14100523890983,1.83240725324762,0,1.34088328328186,0.872338524100369,0,0,0.783556884599516,5.89761447603621,1.39560233594486,4.58726881473362,3.9565046734268,5.44571953024205,3.31397375727916,0.672325146451775,1.20538905604795,2.92124036154949,2.92759679274304,5.17108443922509,5.50801866359483,4.70182082217132,1.71741592278634,2.18999080116615,2.51085279189606,0.0764134057479513,0,0,3.93364276848904,0.383829398097213,7.7408061658038,0,0.90361775633475,2.9580320813343,0,0.142169232487422,0.880801318004542,3.87796785972314,6.01633342410425,4.12320654360118,3.80656306207871,2.91504299417082,3.34848237924443,9.74168199823083,17.760169353374,7.76268995801012,7.67015821788759,9.86802931252382,5.57471467611186,20.1384674625505,23.0544635876191,11.3511470346521,4.13694816883942,5.16387746867061,0,14.1181754656954,15.0098382531815,5.8428105955722,10.7129362329816,10.5906578935111,7.03270838378945,23.4194423132568,24.1351025722175,14.4916415181116,6.09439401120026,11.3477044938228,10.5879782329248,30.6523371613227,19.2948679815475,9.55630916702513,7.87019353423379,6.2607198117886,2.21523671208619,0.633765858935825,0.212604299965044,1.67726916406701,2.13424399178341,1.50176892841506,2.25015821375912,1.14005097496499,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,0.526768169550154,0.393419540227666,0,1.02800749499755,0.334372990781356,0,0,0,1.55974639639243,1.76763544484902,0.664601683750863,1.89562704635511,1.0247305578054,1.1705341280389,0.493313713811028,0.276350017785848,0,0,0,0,1.24640276967323,1.14966148080576,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0,0,0,1.64225599384209,0.201606743224732,1.06976078313403,0.289648807765598,2.43806866313962,1.34140171940727,0.383587685530591,1.80719576192283,5.51471701699479,5.5041677205113,20.6774346233286,10.2193322763554,2.9305793320861,2.4390233720882,4.21606971327005,1.17881167947941,4.00724817121796,1.48313777113772,1.9472843619281,2.43781632218974,2.39324328933957,11.4475499666564,4.0039643754609,7.4291500265913,2.38514888840046,2.58070378531837,0.347140501607594,0.56530794192401,1.25849830862972,0.550236083880135,1.04497483268405,1.29208379584664,1.77883131343355,1.33888245105868,1.20848795132744,0.760272105718513,0.24406205754817,0.367663080345869,0,1.3394959242612,0.898117490504679,1.35133776579987,1.53316637465883,1.89853131913626,0.916008719652036,0,0,3.48875241714027,6.46063537203914,1.77282716330412,12.711281358069,7.74458876021797,4.965357350777,0,2.1349799145941,1.2333377420858,1.24484414159907,0.942974704487816,0.817309515567294,1.96764655938411,2.30470369792,8.66989297785048,1.24864030732128,3.99330275081114,1.04614076386261,6.22402842811954,3.39933183173076,2.24721290723598,1.83738754129404,2.57952066354713,5.88956952701863,4.75201142912821,3.21447008062124,5.46096817162816,2.15585442544872,1.0100166837244,4.75450375513464,4.98715407871529,4.82875382968922,6.12975591598039,3.30523729594513,0.907457465280168,12.3778848625315,3.84403299873421,5.72216133130817,11.7035527472917,6.49230934202165,9.01741890159702,2.41951913231067,11.1392379279236,5.06672426838233,16.9130628743557,4.14224543890347,1.93975268182574,15.9754316632476,4.63459651847145,4.23901480776219,1.35282597214308,1.09098448236334,1.43402297694502,0,0,0,0.10366105501537,0,0,3.12899064659632,3.85944562915731,4.14404764057442,3.25057549622385,0.721879481669586,0.709840800239063,1.34867752062481,0.482022059766964,0.882351781859152,0.871517776369625,1.42362371466658,0.943819157121151,0.784885860501384,0.38474715694639,0,1.40241773803446,1.2347220339942,2.94017422771084,1.26755034821831,1.96565443335525,1.18157981336281,1.32438929824395,1.35287282397425,1.71567810298526,0.548751427043128,0,0.904760751704678,3.05541869023148,7.49359102213747,3.11980435583874,5.77325368101093,2.20267769452646,2.7003999674239,0.721832238805369,2.31492756288305,0.190254152234598,2.37061319387782,0,1.23108503043699,1.17002132569619,1.33768046059855,0,0.335964256397719,1.13420077793909,3.13454829459969,2.90633938513962,0.383382679165211,7.8826118063351,3.96217953059517,0.414656231081544,0.144119953416961,0.25248486685276,0.761974731506028,2.29193055334967,0,5.13217338068116,0.719792448923265,1.50171528921959,3.71574362419752,4.26098120512371,6.5394010324992,2.4935017179123,6.72212921940444,7.15312891703765,0,4.5209479819428,9.36066932202295,2.82928111688356,5.67396528093113,4.52917704327369,3.0025378668211,4.34097284313154,3.29296134712308,3.25736184293735,0.710783897485092,1.58390374586686,2.71295439353627,1.74306691720059,3.499054691372,2.43247561282381,3.51579964002488,4.21667878966063,2.87549826589899,1.14861935834114,4.27910715122155,3.90909528002464,3.90405012845728,5.37182889719687,1.34502172792233,0.591092280605782,0.862510299438069,0.77005821767849,2.03275699377971,0,1.54657762555539,0.335032530668698,1.27587750330633,0,0,0.414415513436035,1.8403723757871,3.00102312635806,1.89885516589815,4.3673880921469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| |||
|short_description=p4@RUNX1 | |||
}} |
Latest revision as of 06:34, 18 September 2015
Short description: | p4@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RUNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000399240_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.34e-16 | 427 |
somatic stem cell | 3.50e-15 | 433 |
stem cell | 1.11e-13 | 441 |
classical monocyte | 5.78e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.78e-12 | 42 |
defensive cell | 2.36e-11 | 48 |
phagocyte | 2.36e-11 | 48 |
connective tissue cell | 3.07e-11 | 361 |
monopoietic cell | 4.18e-11 | 59 |
monocyte | 4.18e-11 | 59 |
monoblast | 4.18e-11 | 59 |
promonocyte | 4.18e-11 | 59 |
mesenchymal cell | 1.97e-10 | 354 |
macrophage dendritic cell progenitor | 5.32e-10 | 61 |
motile cell | 8.67e-10 | 386 |
fibroblast | 1.27e-09 | 76 |
granulocyte monocyte progenitor cell | 2.24e-09 | 67 |
myeloid lineage restricted progenitor cell | 3.63e-09 | 66 |
myeloid leukocyte | 5.09e-08 | 72 |
muscle precursor cell | 6.84e-08 | 58 |
myoblast | 6.84e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.84e-08 | 58 |
muscle cell | 3.75e-07 | 55 |
smooth muscle cell | 7.47e-07 | 43 |
smooth muscle myoblast | 7.47e-07 | 43 |
skin fibroblast | 8.89e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.22e-15 | 167 |
connective tissue | 2.85e-11 | 371 |
mesoderm | 4.95e-11 | 315 |
mesoderm-derived structure | 4.95e-11 | 315 |
presumptive mesoderm | 4.95e-11 | 315 |
bone marrow | 2.34e-10 | 76 |
skeletal system | 2.79e-09 | 100 |
bone element | 3.22e-09 | 82 |
skeletal element | 1.02e-08 | 90 |
multilaminar epithelium | 2.74e-08 | 83 |
epithelial vesicle | 5.25e-08 | 78 |
immune system | 5.49e-08 | 93 |
somite | 5.76e-08 | 71 |
presomitic mesoderm | 5.76e-08 | 71 |
presumptive segmental plate | 5.76e-08 | 71 |
dermomyotome | 5.76e-08 | 71 |
trunk paraxial mesoderm | 5.76e-08 | 71 |
dense mesenchyme tissue | 7.49e-08 | 73 |
paraxial mesoderm | 1.46e-07 | 72 |
presumptive paraxial mesoderm | 1.46e-07 | 72 |
lateral plate mesoderm | 3.76e-07 | 203 |
skeletal muscle tissue | 4.59e-07 | 62 |
striated muscle tissue | 4.59e-07 | 62 |
myotome | 4.59e-07 | 62 |
hematopoietic system | 6.31e-07 | 98 |
blood island | 6.31e-07 | 98 |