FFCP PHASE1:Hg19::chr22:44576794..44576850,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64098 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14654 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBI0 | |||
|association_with_transcript=24bp_to_ENST00000444313,NM_001254741,NM_022141,NR_024426,uc003bep.2,uc010gzp.2_5end | |||
|cluster_id=chr22:44576794..44576850,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_PARVG_5end | |||
|id=chr22:44576794..44576850,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.79e-67!140;CL:0002087!6.17e-63!119;CL:0002031!8.08e-60!124;CL:0000037!6.17e-59!172;CL:0000566!6.17e-59!172;CL:0002032!2.32e-54!165;CL:0000837!2.32e-54!165;CL:0000988!3.80e-53!182;CL:0000557!1.73e-37!71;CL:0002009!1.94e-36!65;CL:0002194!2.13e-35!63;CL:0000576!2.13e-35!63;CL:0000040!2.13e-35!63;CL:0000559!2.13e-35!63;CL:0000839!4.23e-34!70;CL:0000766!1.20e-33!76;CL:0002057!1.64e-32!42;CL:0000763!2.80e-29!112;CL:0000049!2.80e-29!112;CL:0000860!3.45e-29!45;CL:0000542!8.13e-23!53;CL:0000051!8.13e-23!53;CL:0000838!1.61e-22!52;CL:0000945!3.00e-13!24;CL:0000826!3.00e-13!24;CL:0000236!1.87e-11!14;CL:0000791!5.25e-11!18;CL:0000789!5.25e-11!18;CL:0002420!5.25e-11!18;CL:0002419!5.25e-11!18;CL:0000790!5.25e-11!18;CL:0000451!4.28e-10!10;CL:0000084!2.29e-09!25;CL:0000827!2.29e-09!25;CL:0000625!2.34e-09!11;CL:0002393!5.96e-09!9;CL:0002397!5.96e-09!9;CL:0000990!1.92e-08!8;CL:0000134!4.24e-08!358;CL:0002320!2.23e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.81e-24;48!CL:0000860;1.52e-22;33!CL:0002057;1.52e-22;33!CL:0000473;1.10e-21;39!CL:0000234;1.10e-21;39!CL:0002087;1.33e-20;104!CL:0000945;1.47e-20;24!CL:0000766;4.34e-17;69!CL:0000236;7.49e-17;13!CL:0000738;2.30e-15;136!CL:0000542;8.95e-12;53!CL:0000451;6.59e-11;10!CL:0002393;2.06e-09;6!CL:0002397;2.06e-09;6!CL:0000988;8.90e-09;177!CL:0000763;1.13e-08;100!CL:0000990;2.15e-08;8!CL:0000625;7.50e-08;11!CL:0000219;1.30e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.08e-69,115;CL:0000738,1.16e-68,136;CL:0002031,1.82e-59,120;CL:0000037,1.33e-56,168;CL:0000988,2.10e-52,177;CL:0002032,1.68e-51,161;CL:0000837,1.68e-51,161;CL:0002194,1.27e-44,59;CL:0000576,1.27e-44,59;CL:0000040,1.27e-44,59;CL:0000559,1.27e-44,59;CL:0002009,1.08e-42,61;CL:0000557,2.24e-39,67;CL:0000473,3.15e-39,48;CL:0000234,3.15e-39,48;CL:0000839,2.19e-38,66;CL:0000766,1.43e-37,72;CL:0000860,5.94e-37,42;CL:0002057,5.94e-37,42;CL:0000763,6.31e-29,108;CL:0000049,6.31e-29,108;CL:0000838,6.65e-21,52;CL:0000945,2.29e-20,24;CL:0000826,2.29e-20,24;CL:0000542,2.49e-20,53;CL:0000051,2.49e-20,53;CL:0000236,2.26e-18,14;CL:0000134,8.33e-14,354;CL:0002393,1.46e-13,9;CL:0002397,1.46e-13,9;CL:0002320,4.30e-13,361;CL:0000451,4.23e-11,10;CL:0000219,1.27e-10,386;CL:0000990,1.54e-08,8;CL:0000625,2.79e-08,11;CL:0000048,1.05e-07,427;CL:0000034,1.44e-07,441;CL:0000723,2.56e-07,433;CL:0000791,9.99e-07,18;CL:0000789,9.99e-07,18;CL:0002420,9.99e-07,18;CL:0002419,9.99e-07,18;CL:0000790,9.99e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-24;42!CL:0000051;8.95e-12;53!CL:0000049;8.98e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-41!102;UBERON:0003061!1.18e-41!102;UBERON:0002193!3.49e-38!112;UBERON:0002371!7.65e-32!80;UBERON:0001474!5.66e-28!86;UBERON:0002405!2.91e-23!115;UBERON:0004765!2.72e-21!101;UBERON:0001434!2.72e-21!101;UBERON:0007023!5.77e-18!115;UBERON:0003081!3.63e-09!216;UBERON:0000178!2.38e-07!15;UBERON:0000179!2.38e-07!15;UBERON:0000463!2.38e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.24e-12;15!UBERON:0000179;7.24e-12;15!UBERON:0000463;7.24e-12;15!UBERON:0002390;8.41e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.22e-45,98;UBERON:0003061,6.22e-45,98;UBERON:0002193,1.08e-42,108;UBERON:0002371,5.20e-33,76;UBERON:0002405,6.89e-32,93;UBERON:0001474,1.50e-29,82;UBERON:0004765,1.14e-25,90;UBERON:0001434,1.02e-21,100;UBERON:0003081,2.00e-13,203;UBERON:0002384,3.96e-12,371;UBERON:0000178,4.25e-12,15;UBERON:0000179,4.25e-12,15;UBERON:0000463,4.25e-12,15;UBERON:0002204,5.25e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59805579543034,2.05251473624864,2.67616656466509,1.57345710739562,0,2.01260960310899,0,0,0,0,0.426507697462265,0.880801318004542,1.10799081706375,1.00272223735071,1.30206522429511,1.11957737119962,1.29557466407592,2.06060454107349,2.18097358169347,1.51150377475524,1.4555043671269,0.697287110717054,0.411167888021826,1.23882548358041,0.863077176966451,1.7931249457037,0.709446689665756,1.72372840368309,3.22742341791913,2.70852973188684,1.12945403725563,0.545812300115692,0.898893937780338,2.44867113896722,1.92557416245656,1.91801137739712,1.64925650093358,2.19410023383795,2.13112375266347,0.870627715885752,1.70215567407342,2.4912889959823,1.7587406567972,3.12889751052121,2.17188844705117,1.81619850790011,1.84138817993782,1.58231193720442,3.38008458099107,4.67729459923096,5.2414661377094,3.70684482783434,3.60424542819615,5.14321877430656,2.85012743741249,3.58050018958362,4.74926799788048,7.03984977845291,25.122376118058,20.4587128388618,17.0692089026603,17.2170274425485,25.2891073579973,31.0691090208885,14.3108063180305,33.5835651774575,33.4725197941435,30.5818582500183,1.32171328579026,1.12101712596307,0.526768169550154,1.37696839079683,0,1.02800749499755,1.33749196312542,0.32592226663359,0.473447805734733,0,1.44833593950726,0.589211814949674,0.664601683750863,1.35401931882508,0.896639238079726,1.56071217071854,1.64437904603676,2.76350017785848,2.60822777161547,2.37258501059297,3.21048993707656,3.1360657141493,0.453237370790265,0.383220493601921,1.37450978193052,2.02415753615602,1.91139248594458,0.651083453856419,5.70271226669025,2.40920190524436,2.43174561193395,2.49861453104692,1.89421801635213,0.821127996921047,1.81446068902259,0.802320587350522,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,1.62273696827342,2.43781632218974,1.99436940778298,7.3932093534656,5.71994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.234004265139238,1.33768046059855,0,0,0,0,0,0,0,0.264145302039678,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.01354254859276,0,0,0,0,0,0,0,0.560425719967636,0.788123040807709,0.431255149719035,0.641715181398742,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,2.80428461064202,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,2.53723804616085,5.35246044999663,3.41788312304498,3.81170840732462,7.4045209155515,1.94541993357815,2.16012574895246,2.37937552888281,0,0,0,0.185803175125719,0,0.0711418433484141,1.4348364545594,0.399158742865633,0,1.05836791361941,0,0.280797178113459,0.456469358066384,0,0,0.338583555603207,0.1605880751037,0,1.27753871307098,2.06103206853459,0.921722292925374,1.11838053946208,0.166849141711909,0.586164286206121,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0.422008249231538,0,0,0,0,12.1564922833705,0,0,1.23084805461069,0,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.221158519862449,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,3.05515072466813,0,0,0,1.21322039365219,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,1.28071796843612,0,0,0,0,0,0.248505071130865,0.235694034616795,0,0,0,0,0.600420288709789,0.958337652243951,1.27746588066972,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.681017030557878,0,0.137539436597234,0,0.674921674654501,0.77380195455795,0.242998226632099,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.775697738169303,0.39669780522807,0,0,1.06787412567695,0.78602152549833,2.89967338743037,3.47316215268366,0,2.07047417247523,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.998361463831671,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,2.14346339723327,3.05589132720735,14.720885483026,0,0,0,0,1.38699248602383,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.317079050969534,0,0.548257766857182,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0.682986574053893,0.0887023701626388,4.03318956445227,0,0.203909198930495,0.131545547125698,0,0,0.156986185701028,0.157115589916002,0,0.913158720509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| |||
|short_description=p4@PARVG | |||
}} |
Latest revision as of 02:26, 25 September 2015
Short description: | p4@PARVG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PARVG_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 24bp_to_ENST00000444313, NM_001254741, NM_022141, NR_024426, uc003bep.2, uc010gzp.2_5end |
EntrezGene: | PARVG |
HGNC: | 14654 |
UniProt: | Q9HBI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.22e-45 | 98 |
blood island | 6.22e-45 | 98 |
hemolymphoid system | 1.08e-42 | 108 |
bone marrow | 5.20e-33 | 76 |
immune system | 6.89e-32 | 93 |
bone element | 1.50e-29 | 82 |
skeletal element | 1.14e-25 | 90 |
skeletal system | 1.02e-21 | 100 |
lateral plate mesoderm | 2.00e-13 | 203 |
connective tissue | 3.96e-12 | 371 |
blood | 4.25e-12 | 15 |
haemolymphatic fluid | 4.25e-12 | 15 |
organism substance | 4.25e-12 | 15 |
musculoskeletal system | 5.25e-08 | 167 |