FFCP PHASE1:Mm9::chr10:42621456..42621475,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:42621456..42621475,+|id=chr10:42621456..42621475,+|ontology_enrichment_celltype=CL:0002031!5.37e-13!25;CL:0000791!1.30e-11!9;CL:0000789!1.30e-11!9;CL:0002420!1.30e-11!9;CL:0002419!1.30e-11!9;CL:0000790!1.30e-11!9;CL:0000838!4.57e-11!12;CL:0000542!4.28e-10!13;CL:0000051!4.28e-10!13;CL:0000553!5.35e-10!6;CL:0000556!5.35e-10!6;CL:0000624!1.02e-09!8;CL:0000988!1.87e-09!32;CL:0002032!1.87e-09!32;CL:0000037!1.87e-09!32;CL:0000566!1.87e-09!32;CL:0000837!1.87e-09!32;CL:0000084!2.77e-09!11;CL:0000827!2.77e-09!11;CL:0000738!2.33e-07!17;CL:0002087!2.33e-07!17|ontology_enrichment_celltype_v019_2=CL:0000553,3.71e-22,6;CL:0000556,3.71e-22,6;CL:0002031,5.19e-20,25;CL:0000988,2.39e-15,32;CL:0002032,2.39e-15,32;CL:0000037,2.39e-15,32;CL:0000837,2.39e-15,32;CL:0000050,9.33e-15,9;CL:0000838,4.84e-11,12;CL:0002320,2.90e-10,46;CL:0000134,2.90e-10,46;CL:0000839,3.50e-10,13;CL:0000542,3.50e-10,13;CL:0000051,3.50e-10,13;CL:0000791,1.01e-09,9;CL:0000789,1.01e-09,9;CL:0002420,1.01e-09,9;CL:0002419,1.01e-09,9;CL:0000790,1.01e-09,9;CL:0000219,1.55e-08,54;CL:0000763,3.03e-08,16;CL:0000084,5.57e-08,11;CL:0000827,5.57e-08,11;CL:0000738,9.48e-08,17;CL:0002087,9.48e-08,17;CL:0002027,1.51e-07,3;CL:0002006,1.51e-07,3;CL:0002024,1.51e-07,3;CL:0000049,6.48e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.82e-12!48;UBERON:0002106!9.22e-09!6;UBERON:0004457!9.22e-09!6;UBERON:0000042!9.22e-09!6;UBERON:0004854!9.22e-09!6;UBERON:0009034!9.22e-09!6;UBERON:0002095!9.22e-09!6;UBERON:0004782!9.22e-09!6;UBERON:0003281!9.22e-09!6;UBERON:0009664!9.22e-09!6;UBERON:0002296!9.22e-09!6;UBERON:0005602!9.22e-09!6;UBERON:0001179!9.22e-09!6;UBERON:0006293!9.22e-09!6;UBERON:0002390!9.49e-09!45;UBERON:0003061!9.49e-09!45;UBERON:0002405!8.24e-08!70;UBERON:0002465!1.12e-07!3;UBERON:0003887!3.79e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.14e-16,48;UBERON:0002405,1.14e-16,48;UBERON:0002465,4.47e-16,3;UBERON:0001962,6.94e-11,2;UBERON:0001961,6.94e-11,2;UBERON:0001744,6.94e-11,2;UBERON:0002390,2.23e-10,45;UBERON:0003061,2.23e-10,45;UBERON:0002384,2.90e-10,46;UBERON:0002371,3.03e-08,16;UBERON:0002106,3.68e-08,6;UBERON:0004457,3.68e-08,6;UBERON:0000042,3.68e-08,6;UBERON:0004854,3.68e-08,6;UBERON:0009034,3.68e-08,6;UBERON:0002095,3.68e-08,6;UBERON:0004782,3.68e-08,6;UBERON:0003281,3.68e-08,6;UBERON:0009664,3.68e-08,6;UBERON:0002296,3.68e-08,6;UBERON:0005602,3.68e-08,6;UBERON:0001179,3.68e-08,6;UBERON:0006293,3.68e-08,6;UBERON:0000029,7.38e-07,1;UBERON:0001097,7.38e-07,1;UBERON:0003968,7.38e-07,1;UBERON:0001467,7.38e-07,1|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.422366166455,0,0,0.239316476986009,4.96482116800497,6.03200776691082,1.33243904726265,1.41732687172878,0,9.62159604342625,9.1866670515845,6.79023442876848,0.17008658030214,0,0,1.43993180514066,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02678254538567,2.90144856804538,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,7.76813650941515,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,2.03228509183265,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56306321196779,0,0.185194527369712,0.188368457004691,1.36694227721025,1.37266903923914,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr10:42621456..42621475,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:42621456..42621475,+ | |||
|description=CAGE_peak_at_chr10:42621456..42621475,+ | |||
|id=chr10:42621456..42621475,+ | |||
|ontology_enrichment_celltype=CL:0002031!5.37e-13!25;CL:0000791!1.30e-11!9;CL:0000789!1.30e-11!9;CL:0002420!1.30e-11!9;CL:0002419!1.30e-11!9;CL:0000790!1.30e-11!9;CL:0000838!4.57e-11!12;CL:0000542!4.28e-10!13;CL:0000051!4.28e-10!13;CL:0000553!5.35e-10!6;CL:0000556!5.35e-10!6;CL:0000624!1.02e-09!8;CL:0000988!1.87e-09!32;CL:0002032!1.87e-09!32;CL:0000037!1.87e-09!32;CL:0000566!1.87e-09!32;CL:0000837!1.87e-09!32;CL:0000084!2.77e-09!11;CL:0000827!2.77e-09!11;CL:0000738!2.33e-07!17;CL:0002087!2.33e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.71e-22,6;CL:0000556,3.71e-22,6;CL:0002031,5.19e-20,25;CL:0000988,2.39e-15,32;CL:0002032,2.39e-15,32;CL:0000037,2.39e-15,32;CL:0000837,2.39e-15,32;CL:0000050,9.33e-15,9;CL:0000838,4.84e-11,12;CL:0002320,2.90e-10,46;CL:0000134,2.90e-10,46;CL:0000839,3.50e-10,13;CL:0000542,3.50e-10,13;CL:0000051,3.50e-10,13;CL:0000791,1.01e-09,9;CL:0000789,1.01e-09,9;CL:0002420,1.01e-09,9;CL:0002419,1.01e-09,9;CL:0000790,1.01e-09,9;CL:0000219,1.55e-08,54;CL:0000763,3.03e-08,16;CL:0000084,5.57e-08,11;CL:0000827,5.57e-08,11;CL:0000738,9.48e-08,17;CL:0002087,9.48e-08,17;CL:0002027,1.51e-07,3;CL:0002006,1.51e-07,3;CL:0002024,1.51e-07,3;CL:0000049,6.48e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.82e-12!48;UBERON:0002106!9.22e-09!6;UBERON:0004457!9.22e-09!6;UBERON:0000042!9.22e-09!6;UBERON:0004854!9.22e-09!6;UBERON:0009034!9.22e-09!6;UBERON:0002095!9.22e-09!6;UBERON:0004782!9.22e-09!6;UBERON:0003281!9.22e-09!6;UBERON:0009664!9.22e-09!6;UBERON:0002296!9.22e-09!6;UBERON:0005602!9.22e-09!6;UBERON:0001179!9.22e-09!6;UBERON:0006293!9.22e-09!6;UBERON:0002390!9.49e-09!45;UBERON:0003061!9.49e-09!45;UBERON:0002405!8.24e-08!70;UBERON:0002465!1.12e-07!3;UBERON:0003887!3.79e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.14e-16,48;UBERON:0002405,1.14e-16,48;UBERON:0002465,4.47e-16,3;UBERON:0001962,6.94e-11,2;UBERON:0001961,6.94e-11,2;UBERON:0001744,6.94e-11,2;UBERON:0002390,2.23e-10,45;UBERON:0003061,2.23e-10,45;UBERON:0002384,2.90e-10,46;UBERON:0002371,3.03e-08,16;UBERON:0002106,3.68e-08,6;UBERON:0004457,3.68e-08,6;UBERON:0000042,3.68e-08,6;UBERON:0004854,3.68e-08,6;UBERON:0009034,3.68e-08,6;UBERON:0002095,3.68e-08,6;UBERON:0004782,3.68e-08,6;UBERON:0003281,3.68e-08,6;UBERON:0009664,3.68e-08,6;UBERON:0002296,3.68e-08,6;UBERON:0005602,3.68e-08,6;UBERON:0001179,3.68e-08,6;UBERON:0006293,3.68e-08,6;UBERON:0000029,7.38e-07,1;UBERON:0001097,7.38e-07,1;UBERON:0003968,7.38e-07,1;UBERON:0001467,7.38e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.422366166455,0,0,0.239316476986009,4.96482116800497,6.03200776691082,1.33243904726265,1.41732687172878,0,9.62159604342625,9.1866670515845,6.79023442876848,0.17008658030214,0,0,1.43993180514066,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02678254538567,2.90144856804538,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,7.76813650941515,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,2.03228509183265,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56306321196779,0,0.185194527369712,0.188368457004691,1.36694227721025,1.37266903923914,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr10:42621456..42621475,+ | |||
}} |
Latest revision as of 09:39, 4 August 2015
Short description: | p@chr10:42621456..42621475, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:42621456..42621475, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.14e-16 | 48 |
immune system | 1.14e-16 | 48 |
lymphoid system | 4.47e-16 | 3 |
gut-associated lymphoid tissue | 6.94e-11 | 2 |
mucosa-associated lymphoid tissue | 6.94e-11 | 2 |
lymphoid tissue | 6.94e-11 | 2 |
hematopoietic system | 2.23e-10 | 45 |
blood island | 2.23e-10 | 45 |
connective tissue | 2.90e-10 | 46 |
bone marrow | 3.03e-08 | 16 |
spleen | 3.68e-08 | 6 |
cavity lining | 3.68e-08 | 6 |
serous membrane | 3.68e-08 | 6 |
gastrointestinal system mesentery | 3.68e-08 | 6 |
stomach region | 3.68e-08 | 6 |
mesentery | 3.68e-08 | 6 |
gastrointestinal system serosa | 3.68e-08 | 6 |
mesentery of stomach | 3.68e-08 | 6 |
gut mesentery | 3.68e-08 | 6 |
dorsal mesentery | 3.68e-08 | 6 |
dorsal mesogastrium | 3.68e-08 | 6 |
peritoneal cavity | 3.68e-08 | 6 |
spleen primordium | 3.68e-08 | 6 |
lymph node | 7.38e-07 | 1 |
axillary lymph node | 7.38e-07 | 1 |
peripheral lymph node | 7.38e-07 | 1 |
shoulder | 7.38e-07 | 1 |