FFCP PHASE1:Hg19::chr2:231084659..231084721,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3431 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5401 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HB58,G5E9C0,C9JZQ4 | |||
|association_with_transcript=0bp_to_ENST00000258381,ENST00000358662,ENST00000392048,ENST00000455674,ENST00000462232_5end | |||
|cluster_id=chr2:231084659..231084721,- | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_1_at_SP110_5end | |||
|id=chr2:231084659..231084721,- | |||
|ontology_enrichment_celltype=CL:0000738!8.12e-46!140;CL:0002087!1.63e-40!119;CL:0000037!1.70e-39!172;CL:0000566!1.70e-39!172;CL:0002031!9.45e-37!124;CL:0002032!1.14e-36!165;CL:0000837!1.14e-36!165;CL:0000988!1.51e-35!182;CL:0000766!1.19e-23!76;CL:0002057!1.35e-21!42;CL:0000542!1.01e-20!53;CL:0000051!1.01e-20!53;CL:0000838!2.46e-20!52;CL:0000839!2.92e-18!70;CL:0000860!6.94e-18!45;CL:0002194!9.04e-18!63;CL:0000576!9.04e-18!63;CL:0000040!9.04e-18!63;CL:0000559!9.04e-18!63;CL:0000557!4.45e-17!71;CL:0000763!1.81e-16!112;CL:0000049!1.81e-16!112;CL:0002009!7.91e-16!65;CL:0000134!1.88e-12!358;CL:0002320!6.64e-12!365;CL:0000945!8.50e-12!24;CL:0000826!8.50e-12!24;CL:0000084!7.37e-09!25;CL:0000827!7.37e-09!25;CL:0000236!1.14e-08!14;CL:0000791!1.48e-08!18;CL:0000789!1.48e-08!18;CL:0002420!1.48e-08!18;CL:0002419!1.48e-08!18;CL:0000790!1.48e-08!18;CL:0000219!2.09e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-15;33!CL:0002057;1.17e-15;33!CL:0000576;2.80e-14;48!CL:0002087;1.33e-13;104!CL:0000473;1.57e-13;39!CL:0000234;1.57e-13;39!CL:0000766;2.03e-12;69!CL:0000542;2.19e-12;53!CL:0000945;8.79e-12;24!CL:0000738;8.54e-11;136!CL:0000084;7.78e-09;25!CL:0000791;1.47e-08;18!CL:0000789;1.47e-08;18!CL:0002419;1.47e-08;18!CL:0000236;2.49e-08;13!CL:0000988;1.93e-07;177!CL:0000763;2.50e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.74e-50,136;CL:0002087,1.31e-44,115;CL:0000037,1.15e-42,168;CL:0002031,1.78e-40,120;CL:0002032,8.89e-40,161;CL:0000837,8.89e-40,161;CL:0000988,7.15e-39,177;CL:0000766,1.55e-27,72;CL:0000473,6.85e-22,48;CL:0000234,6.85e-22,48;CL:0000839,1.03e-21,66;CL:0000860,1.35e-21,42;CL:0002057,1.35e-21,42;CL:0002194,2.05e-21,59;CL:0000576,2.05e-21,59;CL:0000040,2.05e-21,59;CL:0000559,2.05e-21,59;CL:0000542,1.01e-20,53;CL:0000051,1.01e-20,53;CL:0000557,2.46e-20,67;CL:0000838,2.46e-20,52;CL:0002009,4.10e-19,61;CL:0000763,7.67e-19,108;CL:0000049,7.67e-19,108;CL:0000134,1.57e-13,354;CL:0002320,5.97e-13,361;CL:0000945,8.50e-12,24;CL:0000826,8.50e-12,24;CL:0000219,2.94e-09,386;CL:0000084,7.37e-09,25;CL:0000827,7.37e-09,25;CL:0000236,1.14e-08,14;CL:0000791,1.48e-08,18;CL:0000789,1.48e-08,18;CL:0002420,1.48e-08,18;CL:0002419,1.48e-08,18;CL:0000790,1.48e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-15;42!CL:0000051;2.19e-12;53!CL:0000790;1.47e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.45e-23!112;UBERON:0002390!3.06e-23!102;UBERON:0003061!3.06e-23!102;UBERON:0002371!1.26e-15!80;UBERON:0002405!7.16e-15!115;UBERON:0001474!9.19e-15!86;UBERON:0004765!2.86e-12!101;UBERON:0001434!2.86e-12!101;UBERON:0002384!1.04e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.51e-26,108;UBERON:0002390,2.22e-26,98;UBERON:0003061,2.22e-26,98;UBERON:0002405,1.28e-21,93;UBERON:0002371,1.85e-18,76;UBERON:0001474,2.29e-17,82;UBERON:0004765,1.28e-16,90;UBERON:0001434,7.95e-14,100;UBERON:0002384,9.74e-13,371 | |||
|phase1_expression=17.4411244099734,13.274232481241,16.6326196833246,7.00513088471913,8.04529969969118,7.85104671690332,17.7309914717817,27.7956744307806,15.6711376919903,13.7611004440845,14.653824527421,11.1405099786388,8.96807725976742,18.564952944007,11.2675107747491,26.893005858071,21.0943084808392,18.9880623500717,13.1741855673437,16.4982217822896,11.2200380184339,13.4785530235578,13.4530913951597,7.66496780408152,8.03472893406738,140.447839764734,116.829138787273,141.207141676741,111.32209034824,79.0688560080258,66.5709330259127,2.75826367343678,8.13255980701275,5.9160641626686,81.5729622110576,27.8651695675346,38.461657552865,67.0334444323572,67.5834787974377,56.2058155154056,64.2637411068583,57.9769662173973,64.3938919085466,69.3549598978524,64.9946623144752,80.537908314355,45.3236621966085,32.4822631537242,53.888908535748,360.478567579655,298.171062399873,360.398918350204,78.2572695272124,67.7758917763017,69.0675081631143,56.0962171836962,43.1191717091396,50.7875074845891,159.163624032869,108.47401115172,124.031402405014,409.015612231528,365.816348078073,409.175760511386,200.534583892352,85.107783703671,159.442495742867,311.045847587848,268.042220067984,348.805284596417,290.591761264017,189.662982533596,287.980772571205,164.567868037003,171.359065771825,130.198018860701,117.60807681038,116.537268845009,215.050835000693,152.766830645309,196.927510427099,176.636236690401,183.036094239776,178.587325882717,211.703202419526,142.95462455978,175.373442321773,185.070285665344,192.364057980395,178.408052098113,230.531252489327,199.660644386119,213.690734522003,46.2599650026591,56.0508562981536,35.0300832750852,118.222571838414,62.8817220398664,81.0069906058066,174.877074178649,93.865612790474,100.370934815763,99.3616314880348,133.135495977782,91.6224372246744,113.20382013223,172.77286508208,119.124927344878,119.004303017289,137.470088248673,110.263657096554,186.343384127639,150.955721298977,153.033353667316,136.94153618452,126.906463821274,93.8890209324707,95.8720572896538,159.149386280267,93.0211009826363,83.989765547478,70.3334512891797,94.5611747808413,114.164057149741,104.941810303971,105.365877159588,75.5437757167363,83.8684051814887,51.8833979820004,68.2122942287983,9.75227465255847,12.0726154746655,8.69465420536006,13.0118094858444,13.536123587169,11.2980284789442,22.2680065174308,5.83961844363163,17.5834759925166,12.6385756553661,12.2090352113445,27.5056058545197,14.2075162434091,8.89882662682631,20.446485800245,20.0249197894157,25.5279284196221,88.2415309929765,187.042335825102,99.922067857653,11.5282196272689,11.1830497363796,14.9270415691266,8.47961912886015,16.7799774483962,8.80377734208216,14.4206526910399,16.538672586837,25.6151709134431,16.0665894127042,24.9754176607671,6.0821768457481,10.7387305321195,18.3831540172934,12.1521292182264,22.0570328861677,20.4321729089815,21.0583468503813,3.06633274931766,2.84779697870439,6.04565754970344,544.253124010941,457.580711695024,25.293455024267,9.93943903390637,20.6407734013265,26.2170178010173,25.8152958673932,18.7974242565129,11.2135520028461,9.60740961567345,13.3200476145266,21.4735614425839,13.8751992231779,17.6538855362535,25.2766904167035,17.2852777344,29.0558575473908,9.05264222807929,17.1141546463335,11.8064457635923,10.4516703792951,8.41739310714284,10.5338105026686,19.8029546117246,12.160597413865,14.8789124893102,70.0921685796412,23.4903582814629,42.7775840110872,19.4026898290384,11.7835279767846,11.2606667884768,34.6330144355229,23.2658139066844,11.3400484445637,17.127138715352,18.1491493056034,34.8015893236392,22.8506406035867,16.7426201916054,38.1115692027191,29.3699708329551,32.2050675057036,25.4980093174278,28.1856474842915,22.6053851973981,37.3601985881289,24.0250235456401,38.4717615228772,34.4359304741116,14.9113105376908,18.3125439695327,39.2319531921493,37.6389646415352,33.8429422559025,3.78118489001746,2.65059536642971,3.02104251460748,3.42081481550722,2.27088765788066,1.82488679537915,46.9348596989448,25.0863965895225,29.0083334840209,52.0092079395817,33.2064561568009,7.21671480243048,5.39471008249925,6.50729780685401,6.61763836394364,4.79334777003293,3.79632990577755,7.01122802432855,7.45641567476315,6.15595451114225,15.5012645471176,15.426595118379,9.4662022606222,16.1709582524096,41.8291614912042,35.3817798003945,25.9947558939818,21.6316918713179,7.01034099695747,16.2989419783599,27.6570719229736,3.37205259772859,16.9893963375656,28.7950064443027,75.9133351373057,12.4792174233549,8.6598805215164,10.0859452328317,16.2023998045434,38.6902079999678,24.0752466539838,20.7377025935712,15.8040879591855,12.0188062693282,48.0123161870425,23.1664222487845,26.3077157251049,27.1828118561653,83.655099843032,64.7912194397706,12.0904005648845,8.13775027839093,10.3513323374607,275.398749983832,99.1425366988925,42.5022636858583,31.7063897517315,35.4741237928128,25.8436429769128,45.0746342158768,33.9930596909136,17.1072446022705,10.8997142265523,25.2288168588891,76.0298310797338,31.1724414480103,23.9778037858304,24.1282960350926,17.4516816273,17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| |||
|short_description=p1@SP110 | |||
}} |
Latest revision as of 06:15, 25 September 2015
Short description: | p1@SP110 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SP110_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 0bp_to_ENST00000258381, ENST00000358662, ENST00000392048, ENST00000455674, ENST00000462232_5end |
EntrezGene: | SP110 |
HGNC: | 5401 |
UniProt: | Q9HB58G5E9C0C9JZQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.51e-26 | 108 |
hematopoietic system | 2.22e-26 | 98 |
blood island | 2.22e-26 | 98 |
immune system | 1.28e-21 | 93 |
bone marrow | 1.85e-18 | 76 |
bone element | 2.29e-17 | 82 |
skeletal element | 1.28e-16 | 90 |
skeletal system | 7.95e-14 | 100 |
connective tissue | 9.74e-13 | 371 |