FFCP PHASE1:Mm9::chr11:120494853..120494905,-: Difference between revisions
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{{FFCP|EntrezGene=17134|HGNC=|UniProt=A2ABY9,O54790|association_with_transcript=0bp_to_ENSMUST00000128498,NM_010756,uc007mtu.1_5end|description=CAGE_peak_1_at_Mafg_5end|id=chr11:120494853..120494905,-|ontology_enrichment_celltype=CL:0000221!2.25e-17!44;CL:0000133!2.25e-17!44;CL:0002319!2.60e-17!43;CL:0000055!6.66e-16!50;CL:0000540!8.72e-16!33;CL:0000047!8.72e-16!33;CL:0000031!8.72e-16!33;CL:0000404!8.72e-16!33;CL:0000393!6.68e-14!39;CL:0000211!6.68e-14!39;CL:0002321!6.24e-11!70;CL:0000220!6.24e-11!70;CL:0000034!7.11e-11!97;CL:0000117!1.12e-10!23;CL:0000337!1.12e-10!23;CL:0000723!3.93e-10!91;CL:0000048!3.93e-10!91;CL:0000144!7.71e-10!121;CL:0000012!7.71e-10!121;CL:0002371!3.65e-09!118;CL:0000548!6.01e-09!115;CL:0000004!6.01e-09!115;CL:0000255!6.01e-09!115|ontology_enrichment_celltype_v019_2=CL:0000221,2.25e-17,44;CL:0000133,2.25e-17,44;CL:0002319,2.60e-17,43;CL:0000540,8.72e-16,33;CL:0000047,8.72e-16,33;CL:0000031,8.72e-16,33;CL:0000404,8.72e-16,33;CL:0000393,6.68e-14,39;CL:0000211,6.68e-14,39;CL:0002321,6.24e-11,70;CL:0000034,7.11e-11,97;CL:0000117,1.12e-10,23;CL:0000337,1.12e-10,23;CL:0000723,3.93e-10,91;CL:0000048,3.93e-10,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.07e-25!75;UBERON:0001016!3.07e-25!75;UBERON:0001017!1.47e-24!73;UBERON:0005743!1.47e-24!73;UBERON:0004121!1.35e-21!102;UBERON:0000924!1.35e-21!102;UBERON:0006601!1.35e-21!102;UBERON:0001049!4.95e-15!52;UBERON:0005068!4.95e-15!52;UBERON:0006241!4.95e-15!52;UBERON:0007135!4.95e-15!52;UBERON:0002020!9.42e-15!34;UBERON:0000033!1.10e-14!63;UBERON:0000955!1.81e-14!50;UBERON:0006238!1.81e-14!50;UBERON:0002616!3.66e-14!49;UBERON:0002346!6.54e-14!71;UBERON:0003075!6.54e-14!71;UBERON:0007284!6.54e-14!71;UBERON:0002791!3.61e-13!29;UBERON:0003528!3.61e-13!29;UBERON:0001893!3.61e-13!29;UBERON:0003080!4.51e-11!40;UBERON:0003056!7.03e-11!49;UBERON:0002780!1.26e-10!39;UBERON:0001890!1.26e-10!39;UBERON:0006240!1.26e-10!39;UBERON:0000956!1.04e-09!21;UBERON:0001869!1.04e-09!21;UBERON:0000203!1.04e-09!21;UBERON:0002619!4.67e-08!17;UBERON:0000010!8.49e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.07e-25,75;UBERON:0001017,1.47e-24,73;UBERON:0004121,5.48e-24,95;UBERON:0000924,5.48e-24,95;UBERON:0006601,5.48e-24,95;UBERON:0002346,2.70e-16,64;UBERON:0003075,2.70e-16,64;UBERON:0007284,2.70e-16,64;UBERON:0000073,7.03e-16,54;UBERON:0001049,4.95e-15,52;UBERON:0005068,4.95e-15,52;UBERON:0006241,4.95e-15,52;UBERON:0007135,4.95e-15,52;UBERON:0010371,6.31e-15,73;UBERON:0002020,9.42e-15,34;UBERON:0000955,2.96e-13,47;UBERON:0006238,2.96e-13,47;UBERON:0003528,3.61e-13,29;UBERON:0002791,3.61e-13,29;UBERON:0001893,3.61e-13,29;UBERON:0002616,5.91e-13,46;UBERON:0010314,8.15e-12,92;UBERON:0003080,4.51e-11,40;UBERON:0003056,7.03e-11,49;UBERON:0002780,1.26e-10,39;UBERON:0001890,1.26e-10,39;UBERON:0006240,1.26e-10,39;UBERON:0000956,1.04e-09,21;UBERON:0001869,1.04e-09,21;UBERON:0000203,1.04e-09,21;UBERON:0002619,4.67e-08,17;UBERON:0000010,8.49e-07,11|phase1_expression=9.76907967339243,4.18770489167233,4.09499315450582,11.1911758183527,17.0304548181758,6.5472916045637,4.20502753071946,2.96983643915625,21.3998857670533,17.3207749478275,16.0944890131975,10.8490136233658,2.73921167889929,1.39872643870396,6.99530499812892,7.08663435864391,11.8925519281785,3.94327706697797,3.56497527374921,3.81950686618227,6.63337663178344,7.74469419366905,6.00759515019551,3.03985603307473,5.73523202667925,3.44539178469012,4.30761996159075,3.23206849028834,5.70070258369122,4.28451220591882,3.54768817048488,10.7955214488137,11.6862309641068,15.8481681015439,5.19932915552294,2.99222361645286,4.08338712524738,7.53356935326434,10.9386948233332,9.94695113550217,11.7646297606203,9.56263678941824,5.82612423637384,4.65818226509636,5.87986201073184,5.32285581268876,18.7773922643529,10.4652075062614,9.44650585758229,8.55491555926847,9.23910382727393,7.18762821824858,12.751478060388,9.42970784614748,7.05796978199174,12.6057123657614,13.4670716771216,14.9544906760458,17.3992156339254,13.7537654610729,17.747279298173,13.2149367506962,8.89294796111139,34.1961892566932,42.5212535903799,44.7602472416043,22.4700082888804,18.0582603501131,13.2722703754851,17.6857779214515,19.1395714829758,13.9968982357864,14.7981922437581,15.8013130987291,14.8560480078266,17.4651569455904,14.3150645299205,13.2794831608595,15.2070467923681,16.7495585417346,13.8146341839639,15.106487746146,15.9134309430787,15.757353080887,13.1406493088057,10.606629077052,12.386336229522,14.5391567743734,19.0072745266292,9.3708734532414,11.3047150593654,11.185510400758,38.7583660213418,9.17495425784289,5.19821133958135,6.2723764193627,4.49422144421606,3.06774580640504,3.89679006904303,4.59341446863442,9.99988280414432,6.41632387071589,22.9324715735981,0,8.87613268145978,14.4415123320806,13.1436355703844,5.59501010623394,2.07150306917737,10.5393918736026,6.59244241711316,5.78484408793068,5.07354093963329,7.08396410597326,7.4080885495494,8.04266184509923,11.8653584512499,6.36237170447611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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17134 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A2ABY9,O54790 | |||
|association_with_transcript=0bp_to_ENSMUST00000128498,NM_010756,uc007mtu.1_5end | |||
|cluster_id=chr11:120494853..120494905,- | |||
|description=CAGE_peak_1_at_Mafg_5end | |||
|id=chr11:120494853..120494905,- | |||
|ontology_enrichment_celltype=CL:0000221!2.25e-17!44;CL:0000133!2.25e-17!44;CL:0002319!2.60e-17!43;CL:0000055!6.66e-16!50;CL:0000540!8.72e-16!33;CL:0000047!8.72e-16!33;CL:0000031!8.72e-16!33;CL:0000404!8.72e-16!33;CL:0000393!6.68e-14!39;CL:0000211!6.68e-14!39;CL:0002321!6.24e-11!70;CL:0000220!6.24e-11!70;CL:0000034!7.11e-11!97;CL:0000117!1.12e-10!23;CL:0000337!1.12e-10!23;CL:0000723!3.93e-10!91;CL:0000048!3.93e-10!91;CL:0000144!7.71e-10!121;CL:0000012!7.71e-10!121;CL:0002371!3.65e-09!118;CL:0000548!6.01e-09!115;CL:0000004!6.01e-09!115;CL:0000255!6.01e-09!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.25e-17,44;CL:0000133,2.25e-17,44;CL:0002319,2.60e-17,43;CL:0000540,8.72e-16,33;CL:0000047,8.72e-16,33;CL:0000031,8.72e-16,33;CL:0000404,8.72e-16,33;CL:0000393,6.68e-14,39;CL:0000211,6.68e-14,39;CL:0002321,6.24e-11,70;CL:0000034,7.11e-11,97;CL:0000117,1.12e-10,23;CL:0000337,1.12e-10,23;CL:0000723,3.93e-10,91;CL:0000048,3.93e-10,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.07e-25!75;UBERON:0001016!3.07e-25!75;UBERON:0001017!1.47e-24!73;UBERON:0005743!1.47e-24!73;UBERON:0004121!1.35e-21!102;UBERON:0000924!1.35e-21!102;UBERON:0006601!1.35e-21!102;UBERON:0001049!4.95e-15!52;UBERON:0005068!4.95e-15!52;UBERON:0006241!4.95e-15!52;UBERON:0007135!4.95e-15!52;UBERON:0002020!9.42e-15!34;UBERON:0000033!1.10e-14!63;UBERON:0000955!1.81e-14!50;UBERON:0006238!1.81e-14!50;UBERON:0002616!3.66e-14!49;UBERON:0002346!6.54e-14!71;UBERON:0003075!6.54e-14!71;UBERON:0007284!6.54e-14!71;UBERON:0002791!3.61e-13!29;UBERON:0003528!3.61e-13!29;UBERON:0001893!3.61e-13!29;UBERON:0003080!4.51e-11!40;UBERON:0003056!7.03e-11!49;UBERON:0002780!1.26e-10!39;UBERON:0001890!1.26e-10!39;UBERON:0006240!1.26e-10!39;UBERON:0000956!1.04e-09!21;UBERON:0001869!1.04e-09!21;UBERON:0000203!1.04e-09!21;UBERON:0002619!4.67e-08!17;UBERON:0000010!8.49e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.07e-25,75;UBERON:0001017,1.47e-24,73;UBERON:0004121,5.48e-24,95;UBERON:0000924,5.48e-24,95;UBERON:0006601,5.48e-24,95;UBERON:0002346,2.70e-16,64;UBERON:0003075,2.70e-16,64;UBERON:0007284,2.70e-16,64;UBERON:0000073,7.03e-16,54;UBERON:0001049,4.95e-15,52;UBERON:0005068,4.95e-15,52;UBERON:0006241,4.95e-15,52;UBERON:0007135,4.95e-15,52;UBERON:0010371,6.31e-15,73;UBERON:0002020,9.42e-15,34;UBERON:0000955,2.96e-13,47;UBERON:0006238,2.96e-13,47;UBERON:0003528,3.61e-13,29;UBERON:0002791,3.61e-13,29;UBERON:0001893,3.61e-13,29;UBERON:0002616,5.91e-13,46;UBERON:0010314,8.15e-12,92;UBERON:0003080,4.51e-11,40;UBERON:0003056,7.03e-11,49;UBERON:0002780,1.26e-10,39;UBERON:0001890,1.26e-10,39;UBERON:0006240,1.26e-10,39;UBERON:0000956,1.04e-09,21;UBERON:0001869,1.04e-09,21;UBERON:0000203,1.04e-09,21;UBERON:0002619,4.67e-08,17;UBERON:0000010,8.49e-07,11 | |||
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| |||
|short_description=p1@Mafg | |||
}} |
Latest revision as of 03:14, 27 September 2015
Short description: | p1@Mafg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mafg_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000128498, NM_010756, uc007mtu.1_5end |
EntrezGene: | Mafg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.25e-17 | 44 |
neurectodermal cell | 2.25e-17 | 44 |
neural cell | 2.60e-17 | 43 |
neuron | 8.72e-16 | 33 |
neuronal stem cell | 8.72e-16 | 33 |
neuroblast | 8.72e-16 | 33 |
electrically signaling cell | 8.72e-16 | 33 |
electrically responsive cell | 6.68e-14 | 39 |
electrically active cell | 6.68e-14 | 39 |
embryonic cell | 6.24e-11 | 70 |
stem cell | 7.11e-11 | 97 |
CNS neuron (sensu Vertebrata) | 1.12e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-10 | 23 |
somatic stem cell | 3.93e-10 | 91 |
multi fate stem cell | 3.93e-10 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.07e-25 | 75 |
central nervous system | 1.47e-24 | 73 |
ectoderm-derived structure | 5.48e-24 | 95 |
ectoderm | 5.48e-24 | 95 |
presumptive ectoderm | 5.48e-24 | 95 |
neurectoderm | 2.70e-16 | 64 |
neural plate | 2.70e-16 | 64 |
presumptive neural plate | 2.70e-16 | 64 |
regional part of nervous system | 7.03e-16 | 54 |
neural tube | 4.95e-15 | 52 |
neural rod | 4.95e-15 | 52 |
future spinal cord | 4.95e-15 | 52 |
neural keel | 4.95e-15 | 52 |
ecto-epithelium | 6.31e-15 | 73 |
gray matter | 9.42e-15 | 34 |
brain | 2.96e-13 | 47 |
future brain | 2.96e-13 | 47 |
brain grey matter | 3.61e-13 | 29 |
regional part of telencephalon | 3.61e-13 | 29 |
telencephalon | 3.61e-13 | 29 |
regional part of brain | 5.91e-13 | 46 |
structure with developmental contribution from neural crest | 8.15e-12 | 92 |
anterior neural tube | 4.51e-11 | 40 |
pre-chordal neural plate | 7.03e-11 | 49 |
regional part of forebrain | 1.26e-10 | 39 |
forebrain | 1.26e-10 | 39 |
future forebrain | 1.26e-10 | 39 |
cerebral cortex | 1.04e-09 | 21 |
cerebral hemisphere | 1.04e-09 | 21 |
pallium | 1.04e-09 | 21 |
regional part of cerebral cortex | 4.67e-08 | 17 |
peripheral nervous system | 8.49e-07 | 11 |