FFCP PHASE1:Mm9::chr11:50415601..50415608,+: Difference between revisions
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{{FFCP|EntrezGene=216725|HGNC=|MCL_coexpression_id=2677|UniProt=Q5NCH8,Q8C9W3|association_with_transcript=14bp_to_NM_175643,uc007iso.1_5end|description=CAGE_peak_3_at_Adamts2_5end|id=chr11:50415601..50415608,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,5.51e-24,6;CL:0000187,5.51e-24,6;CL:0000056,5.51e-24,6;CL:0000222,1.68e-20,7;CL:0000355,7.55e-16,9;CL:0002494,3.52e-13,3;CL:0000737,3.52e-13,3;CL:0000746,3.52e-13,3;CL:0000513,3.52e-13,3;CL:0000192,1.87e-12,3;CL:0000359,1.87e-12,3;CL:0002539,1.87e-12,3;CL:0000514,1.87e-12,3;CL:0000128,1.07e-11,6;CL:0000126,1.07e-11,6;CL:0000127,1.07e-11,6;CL:0002453,8.54e-09,8;CL:0000333,4.78e-07,10;CL:0000095,4.78e-07,10;CL:0000243,4.78e-07,10;CL:0000123,4.78e-07,10;CL:0000125,4.78e-07,10;CL:0000030,4.78e-07,10;CL:0000339,4.78e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!1.26e-07!24;UBERON:0005156!2.11e-07!26;UBERON:0000990!2.11e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.60e-17,11;UBERON:0003077,2.60e-17,11;UBERON:0007285,2.60e-17,11;UBERON:0001134,7.55e-16,9;UBERON:0002036,7.55e-16,9;UBERON:0002385,7.55e-16,9;UBERON:0000486,7.55e-16,9;UBERON:0007503,7.55e-16,9;UBERON:0001015,7.55e-16,9;UBERON:0002329,7.55e-16,9;UBERON:0003082,7.55e-16,9;UBERON:0003059,7.55e-16,9;UBERON:0007282,7.55e-16,9;UBERON:0004290,7.55e-16,9;UBERON:0009618,7.55e-16,9;UBERON:0000383,3.23e-14,10;UBERON:0001135,1.87e-12,3;UBERON:0004237,1.87e-12,3;UBERON:0004695,1.87e-12,3;UBERON:0002111,1.87e-12,3;UBERON:0004178,1.87e-12,3;UBERON:0000947,1.80e-09,4;UBERON:0001637,1.80e-09,4;UBERON:0004573,1.80e-09,4;UBERON:0003509,1.80e-09,4;UBERON:0004571,1.80e-09,4;UBERON:0010191,1.80e-09,4;UBERON:0004572,1.80e-09,4;UBERON:0000055,1.14e-07,5;UBERON:0007500,1.14e-07,5;UBERON:0001981,1.14e-07,5;UBERON:0002049,1.14e-07,5;UBERON:0007798,1.14e-07,5;UBERON:0004537,1.14e-07,5;UBERON:0006965,1.14e-07,5|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.11514624341466,1.65192076945513,10.9534788208725,0,0.439372365468944,1.74986909166855,1.95980990275508,1.43752564364972,0,0,0,1.02903774414379,3.15186783932632,2.57836046138721,0,0,0,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.766124028511126,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.763991238884051,0.294628585473668,0.284743361598206,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.852151612890289,0.779358013808606,0.35333957451034,1.26759077799012,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.470354828542819,0,0.494389935468748,0.433798070759735,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.407357455401265,0.622034853050465,0,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.204109497453984,0.2562274405697,0,0,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.492502392237286,0.324275238183423,0.292399974850665,0.439100230582101,0.939444931322602,0,0.411618449517138,0,0.528901133327089,0,0,0.38660238396628,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.252946148497029,0.295220295959204,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.664394068946325,0.797273843287435,0.163863314715738,0.172684981865896,0.867894351489069,0,0,0,0,0.481651769963376,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.712262414669021,1.30309567482861,0.494910368917606,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,2.06271086496374,0,0,0,0.428674070063185,0.532020700926821,1.60531935841864,1.48094118541909,0.608929898229199,1.40803024838226,0.847328283455281,0,0.98931751764888,0,0.361877549568935,0,0.328281799490123,0.291480836629851,0.370850604021019,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.41326727862668,0.26175594198403,0,0.621339313086926,0,0.897099276263873,0.66183396182839,0.388902376688095,0.258319646955462,0.337912250981556,0.58678619322877,1.0416350787516,0.209718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,2.43987218086537,0.36630324853453,0.643105137237198,0,0,0,0.572895513439397,0.515559547031063,0,0,1.35004500046361,0.45032120322422,0,0,0,0,0.341467211508268,0,0,0,0,0.412070114477788,0,0.505394423527595,0.50695859978048,0.188626341386076,0.37456602987953,0.256100609619477,0.229741875822453,0,0.115884325944855,0,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,0,0.290692833264657,0.188218760830661,0.423073039458382,0.548783918618318,0,0.543216455383447,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0.192906610981141,0.749431733813838,1.16965804222704,0.214871054048298,1.14772999241306,0.220591419119515,0.231867835620421|short_description=p3@Adamts2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216725 | |||
|HGNC= | |||
|MCL_coexpression_id=2677 | |||
|TSSclassifier=NA | |||
|UniProt=Q5NCH8,Q8C9W3 | |||
|association_with_transcript=14bp_to_NM_175643,uc007iso.1_5end | |||
|cluster_id=chr11:50415601..50415608,+ | |||
|description=CAGE_peak_3_at_Adamts2_5end | |||
|id=chr11:50415601..50415608,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.51e-24,6;CL:0000187,5.51e-24,6;CL:0000056,5.51e-24,6;CL:0000222,1.68e-20,7;CL:0000355,7.55e-16,9;CL:0002494,3.52e-13,3;CL:0000737,3.52e-13,3;CL:0000746,3.52e-13,3;CL:0000513,3.52e-13,3;CL:0000192,1.87e-12,3;CL:0000359,1.87e-12,3;CL:0002539,1.87e-12,3;CL:0000514,1.87e-12,3;CL:0000128,1.07e-11,6;CL:0000126,1.07e-11,6;CL:0000127,1.07e-11,6;CL:0002453,8.54e-09,8;CL:0000333,4.78e-07,10;CL:0000095,4.78e-07,10;CL:0000243,4.78e-07,10;CL:0000123,4.78e-07,10;CL:0000125,4.78e-07,10;CL:0000030,4.78e-07,10;CL:0000339,4.78e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!1.26e-07!24;UBERON:0005156!2.11e-07!26;UBERON:0000990!2.11e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.60e-17,11;UBERON:0003077,2.60e-17,11;UBERON:0007285,2.60e-17,11;UBERON:0001134,7.55e-16,9;UBERON:0002036,7.55e-16,9;UBERON:0002385,7.55e-16,9;UBERON:0000486,7.55e-16,9;UBERON:0007503,7.55e-16,9;UBERON:0001015,7.55e-16,9;UBERON:0002329,7.55e-16,9;UBERON:0003082,7.55e-16,9;UBERON:0003059,7.55e-16,9;UBERON:0007282,7.55e-16,9;UBERON:0004290,7.55e-16,9;UBERON:0009618,7.55e-16,9;UBERON:0000383,3.23e-14,10;UBERON:0001135,1.87e-12,3;UBERON:0004237,1.87e-12,3;UBERON:0004695,1.87e-12,3;UBERON:0002111,1.87e-12,3;UBERON:0004178,1.87e-12,3;UBERON:0000947,1.80e-09,4;UBERON:0001637,1.80e-09,4;UBERON:0004573,1.80e-09,4;UBERON:0003509,1.80e-09,4;UBERON:0004571,1.80e-09,4;UBERON:0010191,1.80e-09,4;UBERON:0004572,1.80e-09,4;UBERON:0000055,1.14e-07,5;UBERON:0007500,1.14e-07,5;UBERON:0001981,1.14e-07,5;UBERON:0002049,1.14e-07,5;UBERON:0007798,1.14e-07,5;UBERON:0004537,1.14e-07,5;UBERON:0006965,1.14e-07,5 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.11514624341466,1.65192076945513,10.9534788208725,0,0.439372365468944,1.74986909166855,1.95980990275508,1.43752564364972,0,0,0,1.02903774414379,3.15186783932632,2.57836046138721,0,0,0,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.766124028511126,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.763991238884051,0.294628585473668,0.284743361598206,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.852151612890289,0.779358013808606,0.35333957451034,1.26759077799012,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.470354828542819,0,0.494389935468748,0.433798070759735,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.407357455401265,0.622034853050465,0,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.204109497453984,0.2562274405697,0,0,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.492502392237286,0.324275238183423,0.292399974850665,0.439100230582101,0.939444931322602,0,0.411618449517138,0,0.528901133327089,0,0,0.38660238396628,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.252946148497029,0.295220295959204,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.664394068946325,0.797273843287435,0.163863314715738,0.172684981865896,0.867894351489069,0,0,0,0,0.481651769963376,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.712262414669021,1.30309567482861,0.494910368917606,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,2.06271086496374,0,0,0,0.428674070063185,0.532020700926821,1.60531935841864,1.48094118541909,0.608929898229199,1.40803024838226,0.847328283455281,0,0.98931751764888,0,0.361877549568935,0,0.328281799490123,0.291480836629851,0.370850604021019,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.41326727862668,0.26175594198403,0,0.621339313086926,0,0.897099276263873,0.66183396182839,0.388902376688095,0.258319646955462,0.337912250981556,0.58678619322877,1.0416350787516,0.209718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,2.43987218086537,0.36630324853453,0.643105137237198,0,0,0,0.572895513439397,0.515559547031063,0,0,1.35004500046361,0.45032120322422,0,0,0,0,0.341467211508268,0,0,0,0,0.412070114477788,0,0.505394423527595,0.50695859978048,0.188626341386076,0.37456602987953,0.256100609619477,0.229741875822453,0,0.115884325944855,0,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,0,0.290692833264657,0.188218760830661,0.423073039458382,0.548783918618318,0,0.543216455383447,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0.192906610981141,0.749431733813838,1.16965804222704,0.214871054048298,1.14772999241306,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Adamts2 | |||
}} |
Latest revision as of 15:14, 1 October 2015
Short description: | p3@Adamts2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Adamts2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2677 |
Association with transcript: | 14bp_to_NM_175643, uc007iso.1_5end |
EntrezGene: | Adamts2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.51e-24 | 6 |
muscle cell | 5.51e-24 | 6 |
myoblast | 5.51e-24 | 6 |
mesodermal cell | 1.68e-20 | 7 |
multi-potent skeletal muscle stem cell | 7.55e-16 | 9 |
cardiocyte | 3.52e-13 | 3 |
striated muscle cell | 3.52e-13 | 3 |
cardiac muscle cell | 3.52e-13 | 3 |
cardiac muscle myoblast | 3.52e-13 | 3 |
smooth muscle cell | 1.87e-12 | 3 |
vascular associated smooth muscle cell | 1.87e-12 | 3 |
aortic smooth muscle cell | 1.87e-12 | 3 |
smooth muscle myoblast | 1.87e-12 | 3 |
oligodendrocyte | 1.07e-11 | 6 |
macroglial cell | 1.07e-11 | 6 |
astrocyte | 1.07e-11 | 6 |
oligodendrocyte precursor cell | 8.54e-09 | 8 |
migratory neural crest cell | 4.78e-07 | 10 |
neuron associated cell | 4.78e-07 | 10 |
glial cell (sensu Vertebrata) | 4.78e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.78e-07 | 10 |
glial cell | 4.78e-07 | 10 |
glioblast | 4.78e-07 | 10 |
glioblast (sensu Vertebrata) | 4.78e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.60e-17 | 11 |
paraxial mesoderm | 2.60e-17 | 11 |
presumptive paraxial mesoderm | 2.60e-17 | 11 |
skeletal muscle tissue | 7.55e-16 | 9 |
striated muscle tissue | 7.55e-16 | 9 |
muscle tissue | 7.55e-16 | 9 |
multilaminar epithelium | 7.55e-16 | 9 |
epithelial vesicle | 7.55e-16 | 9 |
musculature | 7.55e-16 | 9 |
somite | 7.55e-16 | 9 |
myotome | 7.55e-16 | 9 |
presomitic mesoderm | 7.55e-16 | 9 |
presumptive segmental plate | 7.55e-16 | 9 |
dermomyotome | 7.55e-16 | 9 |
trunk paraxial mesoderm | 7.55e-16 | 9 |
musculature of body | 3.23e-14 | 10 |
smooth muscle tissue | 1.87e-12 | 3 |
blood vessel smooth muscle | 1.87e-12 | 3 |
arterial system smooth muscle | 1.87e-12 | 3 |
artery smooth muscle tissue | 1.87e-12 | 3 |
aorta smooth muscle tissue | 1.87e-12 | 3 |
aorta | 1.80e-09 | 4 |
artery | 1.80e-09 | 4 |
systemic artery | 1.80e-09 | 4 |
arterial blood vessel | 1.80e-09 | 4 |
systemic arterial system | 1.80e-09 | 4 |
aortic system | 1.80e-09 | 4 |
arterial system | 1.80e-09 | 4 |
vessel | 1.14e-07 | 5 |
epithelial tube open at both ends | 1.14e-07 | 5 |
blood vessel | 1.14e-07 | 5 |
vasculature | 1.14e-07 | 5 |
vascular system | 1.14e-07 | 5 |
blood vasculature | 1.14e-07 | 5 |
vascular cord | 1.14e-07 | 5 |