FFCP PHASE1:Hg19::chr3:145968814..145968846,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57088 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16497 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZR73 | |||
|association_with_transcript=19bp_to_ENST00000433593_5end | |||
|cluster_id=chr3:145968814..145968846,- | |||
|coexpression_cluster_id=C557 | |||
|description=CAGE_peak_2_at_PLSCR4_5end | |||
|id=chr3:145968814..145968846,- | |||
|ontology_enrichment_celltype=CL:0000222!1.02e-16!119;CL:0002139!1.91e-13!24;CL:0000213!9.86e-11!57;CL:0000215!9.86e-11!57;CL:0000115!7.46e-10!35;CL:0000071!2.20e-09!18;CL:0002546!2.20e-09!18;CL:0002078!4.37e-09!44;CL:0000055!1.97e-08!180;CL:0002494!3.75e-08!16;CL:0000192!1.09e-07!42;CL:0000514!1.09e-07!42;CL:0000680!1.28e-07!57;CL:0000056!1.28e-07!57;CL:0000355!1.28e-07!57;CL:0000187!1.82e-07!54;CL:0000359!3.28e-07!32;CL:0000183!5.68e-07!59;CL:0000057!7.34e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.46e-14;24!CL:0000071;1.49e-09;18!CL:0000115;1.60e-09;36!CL:0002494;7.22e-09;16!CL:0002078;8.43e-08;45!CL:0000359;3.64e-07;32!CL:0000213;7.83e-07;58!CL:0000215;7.83e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.36e-17,121;CL:0002139,4.78e-14,24;CL:0000213,8.99e-12,58;CL:0000215,8.99e-12,58;CL:0000115,1.90e-11,36;CL:0002078,1.35e-10,45;CL:0000071,1.31e-09,18;CL:0002546,1.31e-09,18;CL:0002494,7.78e-09,16;CL:0000192,8.71e-08,43;CL:0000514,8.71e-08,43;CL:0000359,3.21e-07,32;CL:0000680,4.83e-07,58;CL:0000056,4.83e-07,58;CL:0000355,4.83e-07,58;CL:0000187,7.35e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;1.49e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!6.00e-39!286;UBERON:0004111!1.13e-33!241;UBERON:0000025!9.45e-29!194;UBERON:0007023!4.25e-27!115;UBERON:0004872!2.17e-25!84;UBERON:0002049!1.83e-22!79;UBERON:0007798!1.83e-22!79;UBERON:0000119!3.26e-22!312;UBERON:0000483!3.71e-22!309;UBERON:0000055!5.77e-22!69;UBERON:0000468!2.25e-21!659;UBERON:0001009!1.11e-20!113;UBERON:0004535!3.15e-20!110;UBERON:0001981!6.45e-19!60;UBERON:0007500!6.45e-19!60;UBERON:0004537!6.45e-19!60;UBERON:0006965!6.45e-19!60;UBERON:0000467!2.01e-18!625;UBERON:0003914!2.40e-18!118;UBERON:0000480!3.95e-18!626;UBERON:0000481!1.03e-16!347;UBERON:0000475!7.43e-16!365;UBERON:0002616!2.24e-14!59;UBERON:0001049!5.67e-14!57;UBERON:0005068!5.67e-14!57;UBERON:0006241!5.67e-14!57;UBERON:0007135!5.67e-14!57;UBERON:0001637!1.89e-13!42;UBERON:0003509!1.89e-13!42;UBERON:0004572!1.89e-13!42;UBERON:0000490!6.11e-13!138;UBERON:0000955!1.10e-12!69;UBERON:0006238!1.10e-12!69;UBERON:0001017!1.15e-12!82;UBERON:0005743!1.84e-12!86;UBERON:0002346!1.15e-11!90;UBERON:0003075!1.45e-11!86;UBERON:0007284!1.45e-11!86;UBERON:0007100!1.50e-11!27;UBERON:0002050!1.95e-11!605;UBERON:0005423!1.95e-11!605;UBERON:0004573!2.17e-11!33;UBERON:0004571!2.17e-11!33;UBERON:0000948!2.18e-11!24;UBERON:0005498!2.18e-11!24;UBERON:0004140!2.18e-11!24;UBERON:0009881!2.18e-11!24;UBERON:0004141!2.18e-11!24;UBERON:0003084!2.18e-11!24;UBERON:0007005!2.18e-11!24;UBERON:0004139!2.18e-11!24;UBERON:0004291!2.18e-11!24;UBERON:0000922!2.36e-11!612;UBERON:0000923!3.55e-11!604;UBERON:0005291!3.55e-11!604;UBERON:0006598!3.55e-11!604;UBERON:0002532!3.55e-11!604;UBERON:0000073!1.88e-10!94;UBERON:0001016!1.88e-10!94;UBERON:0003080!2.43e-10!42;UBERON:0002780!8.28e-10!41;UBERON:0001890!8.28e-10!41;UBERON:0006240!8.28e-10!41;UBERON:0000062!1.95e-09!511;UBERON:0001986!2.20e-09!18;UBERON:0004638!2.20e-09!18;UBERON:0004852!2.20e-09!18;UBERON:0002385!4.53e-09!63;UBERON:0001015!4.53e-09!63;UBERON:0000383!4.53e-09!63;UBERON:0000033!6.22e-09!123;UBERON:0002020!7.81e-09!34;UBERON:0003528!7.81e-09!34;UBERON:0000153!9.14e-09!129;UBERON:0007811!9.14e-09!129;UBERON:0001134!1.60e-08!61;UBERON:0002036!1.60e-08!61;UBERON:0003082!1.60e-08!61;UBERON:0001893!2.08e-08!34;UBERON:0002791!2.99e-08!33;UBERON:0006914!4.91e-08!25;UBERON:0001869!8.46e-08!32;UBERON:0000947!1.77e-07!21;UBERON:0010191!1.77e-07!21;UBERON:0000487!1.85e-07!22;UBERON:0005256!2.96e-07!143;UBERON:0000924!3.25e-07!173;UBERON:0006601!3.25e-07!173;UBERON:0004290!4.38e-07!70;UBERON:0004121!4.97e-07!169;UBERON:0002619!5.31e-07!22;UBERON:0000064!5.95e-07!219;UBERON:0000914!9.24e-07!83;UBERON:0002329!9.24e-07!83;UBERON:0003077!9.24e-07!83;UBERON:0003059!9.24e-07!83;UBERON:0007282!9.24e-07!83;UBERON:0009618!9.24e-07!83;UBERON:0007285!9.24e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.62e-12;25!UBERON:0000948;1.01e-11;22!UBERON:0004573;1.29e-11;33!UBERON:0004571;1.29e-11;33!UBERON:0001637;1.30e-11;42!UBERON:0003509;1.30e-11;42!UBERON:0004572;1.30e-11;42!UBERON:0000055;1.08e-10;65!UBERON:0004638;1.49e-09;18!UBERON:0001986;1.49e-09;18!UBERON:0004852;1.49e-09;18!UBERON:0007500;1.73e-09;56!UBERON:0001981;1.73e-09;56!UBERON:0004537;1.73e-09;56!UBERON:0002049;7.58e-09;75!UBERON:0007798;7.58e-09;75!UBERON:0006914;2.89e-08;25!UBERON:0000947;3.66e-08;21!UBERON:0010191;3.66e-08;21!UBERON:0007023;3.67e-08;114!UBERON:0000487;1.45e-07;22!UBERON:0003528;2.78e-07;34!UBERON:0002020;2.78e-07;34!UBERON:0002619;3.26e-07;22!UBERON:0002780;3.32e-07;41!UBERON:0001890;3.32e-07;41!UBERON:0001893;6.19e-07;34!UBERON:0000073;6.21e-07;53!UBERON:0002616;6.21e-07;53!UBERON:0002791;8.61e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.12e-32,240;UBERON:0007023,3.31e-29,114;UBERON:0000025,1.26e-28,192;UBERON:0004872,3.64e-26,83;UBERON:0000055,1.75e-22,68;UBERON:0002049,3.50e-22,78;UBERON:0007798,3.50e-22,78;UBERON:0001009,3.50e-21,112;UBERON:0004535,1.10e-20,109;UBERON:0003914,1.12e-19,117;UBERON:0007500,5.59e-19,59;UBERON:0001981,5.59e-19,59;UBERON:0004537,5.59e-19,59;UBERON:0006965,5.59e-19,59;UBERON:0000483,7.43e-19,306;UBERON:0000119,1.11e-18,309;UBERON:0010314,2.64e-15,132;UBERON:0001637,1.12e-14,42;UBERON:0003509,1.12e-14,42;UBERON:0004572,1.12e-14,42;UBERON:0001049,8.18e-13,56;UBERON:0005068,8.18e-13,56;UBERON:0006241,8.18e-13,56;UBERON:0007135,8.18e-13,56;UBERON:0007100,1.39e-12,27;UBERON:0004573,2.09e-12,33;UBERON:0004571,2.09e-12,33;UBERON:0000948,2.10e-12,24;UBERON:0005498,2.10e-12,24;UBERON:0004140,2.10e-12,24;UBERON:0009881,2.10e-12,24;UBERON:0004141,2.10e-12,24;UBERON:0003084,2.10e-12,24;UBERON:0007005,2.10e-12,24;UBERON:0004139,2.10e-12,24;UBERON:0004291,2.10e-12,24;UBERON:0000073,1.98e-11,53;UBERON:0002616,1.98e-11,53;UBERON:0000955,4.48e-11,68;UBERON:0006238,4.48e-11,68;UBERON:0000923,4.48e-11,560;UBERON:0010316,4.48e-11,560;UBERON:0005291,4.48e-11,560;UBERON:0006598,4.48e-11,560;UBERON:0010317,4.48e-11,560;UBERON:0002532,4.48e-11,560;UBERON:0002050,8.13e-11,564;UBERON:0000490,9.88e-11,148;UBERON:0001017,2.07e-10,81;UBERON:0004638,1.31e-09,18;UBERON:0001986,1.31e-09,18;UBERON:0004852,1.31e-09,18;UBERON:0002780,1.34e-09,41;UBERON:0001890,1.34e-09,41;UBERON:0003080,1.34e-09,41;UBERON:0006240,1.34e-09,41;UBERON:0003075,2.85e-09,82;UBERON:0007284,2.85e-09,82;UBERON:0002346,3.10e-09,86;UBERON:0005423,3.36e-09,581;UBERON:0011216,7.77e-09,223;UBERON:0002385,1.48e-08,64;UBERON:0001015,1.48e-08,64;UBERON:0000383,1.48e-08,64;UBERON:0003528,1.67e-08,34;UBERON:0002020,1.67e-08,34;UBERON:0005256,1.87e-08,122;UBERON:0000922,2.42e-08,592;UBERON:0001016,2.85e-08,89;UBERON:0006914,2.97e-08,25;UBERON:0000947,4.30e-08,21;UBERON:0010191,4.30e-08,21;UBERON:0001893,4.58e-08,34;UBERON:0001134,5.50e-08,62;UBERON:0002036,5.50e-08,62;UBERON:0003082,5.50e-08,62;UBERON:0000487,1.30e-07,22;UBERON:0002791,1.60e-07,32;UBERON:0001869,2.05e-07,32;UBERON:0002619,3.81e-07,22;UBERON:0003103,4.19e-07,68 | |||
|phase1_expression=20.5296568575729,16.9139413873877,12.1220787522535,18.0131937035635,8.49226079411847,8.72338524100369,0,4.42203911398782,3.91778442299758,0,0,0,0.527533956456907,2.59909341216098,4.97096063591874,6.05092631806598,4.21886169616784,4.38186054232424,6.34312638427659,0.738726348460727,1.02000345622126,0.940364164434263,0.286235987131057,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.512321413058201,0,0,0,0,0,0,0,0,0,0,2.63881040149373,0.797854630486527,0.852449501065388,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,124.34150182012,20.7917266508127,44.8797592070791,7.22878304769133,2.50668955317945,16.0779636046514,0,2.43317435151318,0.378139268656271,0.443458794925128,0.527008714158756,20.3017567021455,0,0,0,0,0,0,0,0,9.73935796096855,15.4842227119102,14.9270415691266,37.8756321089086,34.3989537692123,54.7484903460734,16.510602356408,82.4349461750159,114.556736585121,178.071365990805,121.251624449853,234.92408066702,138.383186629812,62.5027236587977,43.747665185615,32.505101095405,30.0869359319068,22.7475190576311,10.7321646226118,0.949265659568129,6.96166626935548,0,0,0,3.97577561356255,11.9032680964705,16.1539200592127,27.8231522126349,6.02936249737207,7.28880880184999,7.47242970107935,6.41335625884616,56.9516194781572,50.3817913540633,58.8462851208451,34.2067786477545,21.31850920576,0.70296429550139,1.87296046098192,2.2818872861778,0.747243402759005,0.469737994575059,0.971237666208789,0.280901613404497,5.51216262388212,0.61417158655884,5.57959218349133,13.0680314301026,10.6324779589779,3.64064544775211,4.31170885089743,1.85169725349473,1.00094815897571,7.20366700258876,1.31693286264251,1.5324389789951,9.6152357700222,36.7520273438468,3.22901344239952,5.55249210928275,10.5965950579781,2.70081986475962,10.2022003946055,2.57640540045629,2.41951913231067,1.0126579934476,1.75386609290158,4.03894038790583,15.0961833773371,24.7318466932782,1.06502877754984,1.10827308050404,0.339121184620975,0.193260853163297,0.545492241181669,0,0.121973706129595,0,0.232387885739037,0,0.504641701751257,0,0,2.57296375277154,0,20.4321888334071,13.7157101517221,2.36613600079688,2.19160097101532,1.92808823906786,2.75734931830985,1.52515610864684,2.37270619111097,2.83145747136345,1.76599318612811,3.07797725557112,20.6683527294901,5.60967095213783,4.5273141246454,2.94017422771084,7.60530208930985,11.7939266001315,9.45263850690247,0,0.122988438543114,3.43135620597051,0.109750285408626,0,0.100528972411631,0,0.651616610620649,2.07986957055916,1.44331342025273,0.115930404975077,5.9878434060269,294.074454089307,201.861683483402,368.902801182886,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.358234090811393,0,1.15014803749563,0,0,1.03664057770386,0.720599767084807,0.75745460055828,0.253991577168676,0.381988425558278,0,0,1.13110241973656,1.20137223137567,0.285826432630578,1.34557301214433,2.61576041299968,0.8800594298514,3.74887975697556,0,0,8.24408161413099,8.32059495290929,0,0,0.266422179016099,47.3257159008468,0,0,0.65147236858747,41.9362499516204,0,6.93310567237048,1.74306691720059,4.29883862082845,0,0,0,2.63587341040741,3.44585807502342,0,7.52862794671412,3.28762116080613,1.07436577943937,0,0,0,0,0.254094624222463,2.60279707715243,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0.414415513436035,3.18997878469764,0,2.98391526069709,8.7347761842939,3.21172179834891,11.985383542579,16.0483738540017,15.0473049863859,18.1926003244788,10.3473071292505,0,0.368738337083406,9.81784843489336,0.979005787313703,1.02943027143257,0.206768026122887,0,0.106727557803444,0.303127571446259,0,1.20956117331872,24.8107807818777,6.44540287809862,5.61320188866147,12.5576366270587,6.14048698880044,3.86049410744658,8.90508398669946,0.771048469013278,0.532685175939381,1.14978018419333,4.67328986265259,1.27831416305955,0.846016147141356,0,0,3.3296189967736,1.45672934405374,5.90059867317409,0,0,0,0,0.105551628892876,14.7853399292166,15.818714590716,8.85255256018771,23.1340879035434,0.541892875087706,0,0,0,0,1.75407901316748,4.18296721639841,0.256450125116389,0.656029291399411,0.976135183992909,35.1369849718733,0.457847324091717,0.577566499444116,0,0,28.9231073719487,1.54673149267395,0.308097234229289,0.921022048356777,0.275673144969061,1.18162269355101,1.16013355131383,0.93749290157711,2.31483292681517,0,0,0,0.10115778085555,3.253918845081,9.12955805808856,14.6377826733726,12.0133096268675,5.32306030317022,10.4391959049009,30.022523494835,13.8831140139731,1.116475108079,25.6267334022168,30.3102008338881,2.303080121802,14.5499255931533,7.00047145437061,7.8494864019923,2.15846949099978,3.0199073270966,2.82749765629647,5.0545620393329,50.7233027753626,14.3227875121254,0.975267478179181,27.0521973490726,11.6215161432431,3.8219975194236,13.4335160356027,5.65040583101214,3.85955740482287,17.9128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| |||
|short_description=p2@PLSCR4 | |||
}} |
Latest revision as of 06:45, 25 September 2015
Short description: | p2@PLSCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLSCR4_5end |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | 19bp_to_ENST00000433593_5end |
EntrezGene: | PLSCR4 |
HGNC: | 16497 |
UniProt: | Q6ZR73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.36e-17 | 121 |
endothelial cell of vascular tree | 4.78e-14 | 24 |
lining cell | 8.99e-12 | 58 |
barrier cell | 8.99e-12 | 58 |
endothelial cell | 1.90e-11 | 36 |
meso-epithelial cell | 1.35e-10 | 45 |
blood vessel endothelial cell | 1.31e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.31e-09 | 18 |
cardiocyte | 7.78e-09 | 16 |
smooth muscle cell | 8.71e-08 | 43 |
smooth muscle myoblast | 8.71e-08 | 43 |
vascular associated smooth muscle cell | 3.21e-07 | 32 |
muscle precursor cell | 4.83e-07 | 58 |
myoblast | 4.83e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.83e-07 | 58 |
muscle cell | 7.35e-07 | 55 |